Salmo salar (Atlantic salmon): 106565544
Help
Entry
106565544 CDS
T04363
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5-like
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
106565544
Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
106565544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
PH_9
IQ_SEC7_PH
FYVE_2
PH_11
Motif
Other DBs
NCBI-GeneID:
106565544
NCBI-ProteinID:
XP_013988271
UniProt:
A0A1S3LBE1
LinkDB
All DBs
Position
ssa12:complement(58045262..58111100)
Genome browser
AA seq
1565 aa
AA seq
DB search
MNDKWFGCSRGWFLKMDTDFKKPPLAPKPKLVSHLTFKLPSPLMSRPCSLARGPKPPIAP
KPTVPHDPEERDSSLLCNNAQEGYTNGDLISSDEDLDQENEPEDCLSGGKGLEEEEPVEP
QYDSYSLSSGANDPENGYEEQREQEEEEDWRLTDSIQTEEVDSLDTLGVSDAGFTIYSVD
SVEIIDTDIADEIDAEGCYAGEALADTDGVSITSIEEEEAACYLCETWPGKEKKENEEEE
HQIEEEEAEEEAADTTADAVTESLSEEPIDLLVKDNIEEDLFTQEPSSFKEEDEGEVEES
SSYPGSPTNVLQEDLGYDVIGPSEERAERYQPYSIIDEEPMTIQYSMEEGERQHSKHKAK
QLFNTEEEAVDPSLEPYYISTEDIVDPEQSPAEGISDGSAESEITPEESSLVTTETTEPS
EYAAIGDDDSLCEDMGHIECVSSEDYVEIGDDNDDDDDDRENMTGSCQRRMPVVQRVEAF
LNQSNNQPRFRLVSISVPGDTDTSQASSFSDSKLLSPDDSDVFRDEEDLEGHIIPYLDET
TDTEGNLSDEHVYEEAGLDSEGENFLPFDRKSIVTRSRSLSGKVSGYVPDTVPEEAGSEF
HLQNYCEVELDRSGPALSSSPMLNSTRAKSSSKQHRFLLYPRSFSMEGRDLPLCVYREGQ
GSPGERREDSLSLPCVMGSSGSFSQQSPLPSSGLSTPTSMVDIPPPFELAYITKKPITKS
SPSLFIEGDSPDRQKKKKSSFKRFLMLKFRRKTESKLLVDVNVSSSRSSPESSHHGPARV
LDLDRRSTGSSPQLKSRMVSKPQRSPDSPSTFLFYKDGKRKGGSVAFLNRSVARVESFED
RSRAPYTPLPLTKPRSISFPNTDMSDYENIPAQTLSSDYENIQIPSRRPVRPGTFAEFFD
HTSRVLSSANDTDGYVDMSSFPGFERKAQSPEQEPERFQKTALTKLSRAYTEAYTVCAIA
VGSPGGSGVEAGGGTAEEEDQEQTSEEEEGGADNTYDRRTDGRSRAFYIAKELVDTERLH
VKALKLLQEDFREAVGAAVGDEGDPVLEEERLREILNELPDVYTLHRRILTELENRIRQW
EESQRIADVILSRKSEFVVFTTYIGHYDRSMSLLDESCRTSPTFSAIVRQYEQQSPAGDN
VSLKHQLLQVIVRVAQYCMLLNDYLNNLSPDSKEYEDTQAALVIVSDVADQANDSLKHGE
NLLRLVNIEYSVRGQRDLLQPGRVFVKEGTLMKVSRKFRQPRHLFLMNDLLLYTYPQQDG
KYRLKNTLILTGMKVSKPIIEDVQNALRIEGADISITLAASSCSEREDWFHTLSRTVSDH
ARGPGTFSGCSGEARERLWLSLGEKAPTLVPVSHVMMCMNCTSDFSITLRRHHCHACGRI
VCRSCSRNRYPLKYLKDHMAKVCDHCYSELKKRGGDVSGASGTDSPRSNRRSSRPISAVF
QNIHPPSLWRHRKGTASLSQVSVSEEASMSGTQQRSKRSKRNWKRLWFQLKDKVLYTYQA
REEKVASESLPLLGFTVKLPDRPGGEETTNVFELYHKKSLYYTFKAENNHTAERWVNAME
EATVL
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataaatggttcgggtgctcgcgcggatggttcctgaaaatggatacagatttt
aagaagcctcctcttgctcctaaaccaaaacttgtgagtcacctcaccttcaagctgcct
tcccccctcatgtcccggccctgctccttagctaggggccccaaacctcccatcgccccc
aaaccaacagtaccacatgaccctgaggagcgcgactcctccctgctctgcaacaatgcc
caggaggggtacaccaacggggacctaatttcctcagacgaggacctggaccaggagaac
gagccagaggactgtctgagtggagggaaggggctagaggaggaggagccagtggaacct
cagtatgactcatactctctcagttcaggggccaacgatcctgagaatggttatgaagag
cagagggaacaggaggaggaggaagactggaggttaactgacagcattcaaacagaggag
gtggattctctggacacacttggggtcagtgatgctggattcacaatttactcagtggac
tcggtggagataatcgacacagacatcgctgatgagattgacgcagagggctgctacgcg
ggcgaggcgctggccgacacagatggtgtctctatcaccagcattgaggaggaggaggca
gcatgctacctctgtgaaacttggcctgggaaagaaaagaaggagaatgaggaggaagag
caccaaatagaggaagaagaagcagaagaagaagcagctgataccacagcagatgcagta
acagaatctctctctgaggaacccatagatctcctcgtcaaagacaacattgaggaagac
ctttttacccaagagccttcatccttcaaggaggaggatgagggggaagtagaggaatcc
tcatcttaccctggtagtcctaccaatgtcctacaggaggacttaggatatgatgtcatt
ggtccctcagaggagagagcagaaaggtatcaaccatattccataattgatgaagagccc
atgactattcagtacagtatggaagagggtgagcgccaacacagcaaacataaagcgaaa
caacttttcaacacagaggaggaagcagttgaccctagcctcgaaccctactacatctca
actgaggacattgtggatccagagcagagccctgcagagggcataagtgatggatcagca
gagagtgagatcacaccggaagaatcttcactggtcacaacagagaccacggagcccagt
gagtacgcagccataggtgatgatgactcgctgtgtgaggacatggggcatattgagtgt
gtctcttctgaggactacgtcgagataggagatgacaatgatgacgatgatgacgacagg
gagaacatgacaggttcatgtcagagaaggatgcctgtagtccagagggtggaggctttc
ttgaaccagagtaacaaccagccccgcttcaggctggtgtccatctcagtgccaggggac
acagacacctcccaggcctcatcgttctctgacagcaagctactctccccagatgactct
gatgtgttcagggatgaggaggacctagagggccacatcattccctacctggatgagacc
accgacacagaaggtaaccttagtgatgagcatgtctacgaagaggcaggcctggactca
gagggggagaatttcctgccttttgacagaaagtccattgtgaccaggtcccggtcgttg
tcagggaaagtgtctggttacgtgcctgatacggttcctgaggaggcgggctccgagttc
caccttcagaactactgcgaggtggaattggaccggagcggacccgcgctgagcagcagt
cccatgttaaactcaacccgggccaagagctcatccaaacaacatcgctttctcctgtac
ccccgctccttctccatggagggacgggacctgcccctgtgtgtgtacagggagggccag
ggttccccgggggagaggagggaggacagcctctccctgccctgtgtcatgggttcttct
ggaagcttctcccagcaaagtcccctgccctccagcggcctgtccacccctacttcgatg
gtggacatccctcctccctttgagctagcatacatcaccaagaagcccatcaccaagagc
tctccatccctgttcatcgagggggactccccagacaggcagaagaagaagaagtcctcc
ttcaagcgcttcctgatgctgaagttcaggaggaagacggagagcaagctgctggtggac
gtcaatgtgtcctcctccaggtcctcccctgagtccagccaccacggccccgccagggtc
cttgatttagacaggcgcagcacaggcagctccccgcaactcaagtcccggatggtcagt
aagccccagcgctctccggactccccctccaccttcctgttctataaggatgggaagaga
aaagggggttccgtggccttcctcaaccgcagtgtggcccgggtggagtcctttgaggac
cgctcccgcgccccctacacccccctccccctgaccaagccccgctccatctcctttccc
aacactgacatgtcagactacgagaatatccctgcccagaccctcagctccgactatgag
aacatccagatcccttcccggaggcctgtacgaccggggacctttgcagagttctttgac
catacgagtcgggtgctgtcctctgccaatgacactgatggttacgtggatatgagtagc
ttccctgggtttgagagaaaagctcagtcacctgagcaagagcctgaaagatttcagaaa
actgcactgacaaaactgtcacgtgcctatacagaagcctacaccgtgtgcgccatagct
gttggttcacctggcgggtcaggggttgaggcggggggcgggacagcggaggaggaggac
caagaacaaacctctgaggaggaggagggaggagcagataacacatatgacagacggacc
gacggtcgatccagagccttctacattgccaaagagctggtggacactgagagattacat
gtgaaagccctcaagcttctccaagaggacttcagggaggcggtgggggctgcagtaggg
gatgagggggatcctgtgctggaggaggagaggctgagagagatcctcaatgagctgccc
gatgtttacactctgcaccgcagaatcctcaccgagttagagaatcgcatccgacagtgg
gaggagagccagaggattgcggatgtcatcctatccaggaagtcagagtttgtggtcttt
acgacttacatcggtcactacgaccgtagcatgagcctgctggacgaaagctgccgtacc
tcgcccaccttctcggcaatcgtccgccagtatgagcagcagagtccggcaggagacaat
gtctctctcaaacaccagcttctgcaggtcatcgtacgggtggctcaatactgcatgctc
ctcaacgattacctgaacaacctctccccagactctaaagaatacgaagatacacaagcc
gcactggtgatagtatcagacgttgcggatcaagccaatgacagtttgaaacatggggag
aacctgctgcgtctggtcaacatagagtacagtgttcgaggccagagggatctgctccag
cctggcagggtgtttgtgaaggagggcactctgatgaaggtcagcaggaagttcagacag
ccacgccacctgtttctgatgaatgatttgctgctgtacacctaccctcagcaagacggg
aaatacagactgaaaaacaccctaatactgactgggatgaaggtcagtaaacccatcata
gaggatgtgcagaacgctctgaggatcgagggagcagacatctccatcaccttggcagcc
agctcctgtagtgagagagaggactggttccacactctgagtcggacagtgtctgaccac
gccagaggacctggaactttcagcggctgttctggagaggccagagagcgtctgtggctg
tccctgggggagaaggctcctactctggtgcctgtatcccatgtgatgatgtgtatgaac
tgtacctcagacttcagcatcacactgcgcagacaccactgccacgcctgcgggaggatt
gtgtgtcggagctgctccaggaacagataccctctgaagtacctgaaggaccacatggcc
aaagtgtgtgaccactgttacagcgagctcaagaagagaggaggagatgtgtctggggcg
agtggtactgacagtcctcgttctaaccgccgctccagccgcccaatctctgccgtcttc
cagaacattcaccctcccagcctgtggagacaccgcaagggcaccgcatctctgagccag
gtgagtgtgtcagaggaggcctctatgagcgggactcaacagcgcagtaagaggagcaag
aggaactggaagaggctgtggttccaactcaaagacaaggtgctttacacctaccaggcc
cgcgaggagaaggtggcatctgagagtttgcctctcttgggcttcacagtgaagctgcct
gacaggccaggtggagaggagacaaccaacgtctttgagctgtaccacaagaagtccctg
tactacacctttaaggccgagaacaaccacactgctgagagatgggtgaatgccatggag
gaagccacagttttatag
DBGET
integrated database retrieval system
