Salmo salar (Atlantic salmon): 106565565 Help Entry 106565565         CDS       T04363                                  Name (RefSeq) collagen alpha-1(VII) chain-like   KO K16628   collagen type VII alpha Organism sasa  Salmo salar (Atlantic salmon) Pathway sasa04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:sasa00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     106565565 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen fn3 VWA Kunitz_BPTI VWA_2 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C DUF4992 fn3_2 VWA_3 Motif Other DBs NCBI-GeneID:  106565565 NCBI-ProteinID:  XP_013988302 UniProt:  A0A1S3LBG3 LinkDB All DBs Position ssa12:57251792..57350914 Genome browser AA seq 3144 aa AA seqDB search MWSWVFPLAVLLSSVHQAEAQGRCNNVGPADIVFLIDGSSSIGRANFLQVKGFMAGIVKP FTSSVGQSGIRFGAVQYSDTSRVEFTFTTYLNGTELVSAVENLNYKGGNTRTGAGLKFVA DNFFNPTSIRNVSKVCILITDGKSQDSVREPAQKLRSLGVEMFAVGIKSADQTELALIAT PPQRDYTFFVGDFKLLNTLLSLVGPRVCSSSGGVYASDDAFSGPSNLQFSSQTSDSLRFR WTPAGGPVTGYVVQYTPLSGLGQPITAELRQETVSASQRSFVARELKSGTDYLVTVIAQY PNSVGEPVSAKARTNSLPGVSGLRLVQAGFFSLSLTWDAPTSQFQGYRLTYGPRGQPKAQ LLEQSLAADSTSVTLERLLPDTEYFLTLYPLFPRNSASPATLTSRTLRLEAAQQLSVDTV SERSVRVLWRGVGGARAYRLVWGPFTGRDVESVEVAGDSETHTLLNLQPDTEYIVTVIAL YEGNTEGPGATTRFKIERLEQQVLRAATTGPSSIRLTWNFIQSARGYRLEWRQGEGGRMQ SQSFSRNTTIYDLSGLQPSTEYVITLFTLYEGREEATPVTTSPTVEQPVGRVSNLRVVEY LGSTVRLGWTGVAGATQYRILMVNTEAQTEETRSIPGSQTTLDLRGLTEGVSYGVSVTAV VGDSEGDPVTVYIKAEQALERVTNLRVTNTNGRRLRIAWTGVSGATGYRVTWRQGNNAEQ SRVLGPEASSYTVEGLQPDTAVVLGVAAVIGQRIGEVVTLSARTNGNNGSSTVSGLRIID VTSQRIRITWSPVSRATGYKITWRSGNGVESSRTVAADVTSFTIDSLQEDSSYRVSVSSL IGSREGYPTSLNTRTDSDQVVVGTVTSLKAQESRGEVVRVTWVGVQGATAYRVAWKRIDG GEERSQLVGGDLTAVDLEQLDPGAQYEVQVMALVQNREGSPVSVRVTTPGEPVAVDRVEG VRVLEATPGVLRLVWRGMAGVTGYRIYWRSALGEAESSRLIGRDATSFDLDGLRPGVSYT MRLAAIFRDRESQAVTITASTAPLQPVTGLRVAEITQNSVLLGWVPLTGATGYILRWKEE RDTGPGQSTTLPGSSSSYRVTGLRLGLRYRFTLQPNFQREVGPETSVDERTVCVGGRLDV VFLVPGSRDRASLADSLLSLLTSAAGSLTTIGERDSQLGIVVYSARPKVWFLLNRHSNSE TLLQEILSTPFEDGPGNAIGQAMTFTRQFLLSPTAGRRPRVPGAVVIIADEKSSDNVTGP ASVVKASGVTVLAVGIGRADSEELRQAVTDGSTQNLLYARDATQLGTLHADLADLLCGVA RIPEGVGPVTEQCTVQCPRGDRGERGGKGESGRDGADGRKGEPGRDGLPGRDGPRGPEGR QGQPGRSEDPSVGVRGEKGERGFPGLDGSPGLPGRPGSPGPGGVPGSQGLPGVRGDPGDP GVTGAPGTKGDRGDRGEPGSAVSGGGLPGRKGEPGIPGVPGTLGRPGNDGAKGFVGPAGT PGQDGRPGIPGTPGLSIKGDKGSTGERGPPGVGSGLAVKGEKGSPGSTGNPGAQGSRGST GQQGAKGDKGESAEGLPGPAGKAGEPGDRGPRGPAGSIGLKGDRGQPGEPGSQGDRGERG PAGLAAERGESGQPGSTGAPGLRGLPGASGLPGEKGSEGAKGEPGRSGPGLSGKKGEQGE PGLPGPEGPRGQKGDSAQKGEKGSPGAGSPGQAGSKGEQGDRGLSGLAGRMGIKGDSGEP GERGETGRAGPAGKNGIPGKEGAKGDKGDEGTPGESGLPGKAGERGLRGLAGQPGRAGEK GDLGDPGEHGRNGSPGPIGPRGEKGVEGAQGPPGPPGKVGDTVQKLKGERGEKGDAGDPG EHGGKGQKGEAGSSGAAGLRGLEGQRGPPGSRGDTGERGGPGDKGERGASGLDGRNGLDG KPGAPGAAGLRGDPGKLGDPGRDGLPGLRGVQGLPGPIGPAGNPGTPGKAGENGKPGAAG KMGEDGVPGEDGRKGDKGEAGVSGRDGRDGLKGDRGLGGPAGPTGLSGPQGVPGTIGPPG QVVYAKGAPTPSIPGPQGPPGTPGVPGIPGTVGARGERGAVGSKGERGDPGEDGQPGRPG TAVDVQKALSNLGIEMQDLKVLVDNSNVPGKSVLEKAEKGQRGDKGEAGQRGPAGIDGAR GLSGERGVKGEQGERGPVGATGPTGRAIGEKGPVGPPGQAGEPGKPGIPGVPGRAGELGE AGRPGDKGERGEKGDKGEAGKNGLGGSVGPPGPKGAAAVAGEAGLPGARGLPGVTGPKGE PGASGPQGSKGDRGIAGLRGDKGDRGPSGEQGRDGFQGAAGEPGKPGQDGKPGLPGFPGV LGRPGNPGEPGIRGPTGPIGTNGPPGPSGVKGNQGVPGVGVQGLPGPEGSMGVPGPAGPP GAVGPSGPPGLPGQTGEGGKPGVPGRDGIPGKEGTPGLPGKQGIAGLMGSAGLKGEQGDS GPPGKAVAGPPGVKGAQGPPGVTLPGTVGESGLPGLRGERGDKGPAGIKGDRGAAGENGE PGEDGGRGPAGPKGDKGERGIGLAGPPGQLGPQGLNGDTGLPGPAGPPGAQGVAGTPGLA GLRGENGTPGPPGPLGPRGIQGFTGQAGTPGAPGPPGPPGLVGSPGTAGGKGDKGAIGAG VPGLRGERGDPGPRGEEGRGGQNGERGPAGSPGGKGGRGDKGELGLQGGKGEKGDTLLVG GPTGEKGNKGETGDRGPKGVQGEKGLKGNDGPAGEQGLRGEPGDRGSTGFQGARGPGGQK GEAGQPGVPGESGTPGKDGMPGFRGDKGDVGITGMRGIKGDRGSKGACGSDGPKGEKGDS GIHGRSGLPGRKGEQGDLGPPGAIGTPGKEGLIGPKGDRGIDGVLGPKGTQGEKGERGPS GIPGPPGPTGVDGASGLTGPQGPAGAKGPEGLQGQKGERGPIGPAKIGPRGIPGIPGERG GQGELGLDGAKGDRGEPGLTEDEIRAYVRTEMSQHCACGGIVVTETLPSPRVRPAPEQQL ARKGKQGKDGRELRVVVNTNDPDYEHFYSIESYDDPMAMEQSIHLTPTANQSHGERVTVD PLKTKRPRREVKGQAPVDPCVLPLEEGNCGRFTLRWYFNSQVQACRPFIYSGCEGNANRF LQQETCEERCLGEDTGDVPLKKGR NT seq 9435 nt NT seq  +upstreamnt  +downstreamnt atgtggagctgggttttccccctggcggtcctgttgtcctcagtgcaccaggctgaagcc caaggcaggtgtaataatgttggaccagcagacatagtgttcctgatagatggctcgtcc agtatcggcagggccaacttcctgcaggtcaagggcttcatggccggtatcgtcaagccc ttcaccagctccgtgggccaatcagggatccgcttcggcgctgtgcagtacagcgacacc tcaagagtggagttcaccttcaccacgtacctgaatggcacagagctggtcagcgctgtg gagaacctcaactataagggaggcaacactcgcaccggtgctggcctcaaatttgtcgct gacaacttcttcaaccccacttccatccggaacgtctcaaaggtctgtatactgatcaca gatgggaagtctcaagacagtgtaagggaaccagctcagaagctgcggagtctgggagtc gagatgtttgcagtgggtataaagagtgcagaccagactgagttggctctgatagccact cctcctcagagagactacacattctttgtgggggactttaagttgcttaacacactgctc tccctggtgggcccgcgtgtttgttccagctctggtggagtgtacgctagcgatgatgcc ttctccggtccctctaacctccagttctcaagccagacctctgattcgctcaggttccgg tggactcccgcaggggggcctgtgactggctatgtggtacagtacacgcccctctctggc cttggccagccaatcacagcggagctgcgtcaggagacggtgtctgcaagtcagaggagc ttcgtggccagagagctgaagtcagggacagactacctggtgacggtcatcgcccagtat cccaacagtgtgggagagcctgtgtccgccaaggcaagaaccaactcgctaccgggggtg tccggtcttcgtctggtccaggctggtttcttctccctctctctgacctgggacgctccc acctcacagttccagggctaccgactcacctacggaccccgaggtcagcccaaggcccag ctattggagcagtctctggctgcagactctacttctgtcaccctggagaggctactgccc gacacagagtacttcctcaccctctacccgctgttcccccgaaactctgcctcccccgcc accctcacctcacggacattgcgtctagaagcggcccaacagctgtcagtggatactgtg tcagagcgtagtgtccgggtgttgtggagaggagtgggtggagccagggcctacagactg gtctggggaccattcaccggtcgtgatgtggaatctgtggaggtggctggtgacagtgag actcacaccctgttgaacctgcagccagacactgagtacattgtcactgtcatcgctctc tacgaaggcaacacagagggtcctggtgctaccaccaggttcaagatagagcgtctagag cagcaggtgctgagggcagccaccaccgggccctcctccatccgcctcacctggaacttc atccagtctgccaggggataccgcctggagtggaggcagggggaaggtggcagaatgcag agtcagtcgttctccaggaacaccactatttatgatctgtcagggctgcagcccagcact gagtatgtcatcaccttgttcaccctgtatgagggacgagaagaggccacccctgtcacc acctctcccacagtggaacagccggtggggagggtgtccaacctgcgagtggtagagtac ctgggcagcactgtgcgactgggatggacaggggttgccggggcaacgcagtaccgtatc ctcatggtcaacactgaagcgcaaacagaggaaacccgcagtatccctggaagccagacg acccttgaccttaggggtctgacagagggcgtgtcttatggggtcagcgtgacagctgtg gtgggagacagcgagggggacccagtcactgtctacatcaaagcagaacaagcattggag agagtgactaacctgcgtgtgacaaacaccaatggtcggcgactcagaatcgcctggaca ggggtttccggggcgacagggtacagggtcacttggagacaaggcaacaatgcggagcag tcccgtgttctggggccagaggcctcgtcctatacggtggaggggctgcagccagacaca gctgtggtcctgggcgtggcggctgtgattggtcaacgtatcggggaggtggtcaccctc tcggccaggaccaatggcaacaacggctcaagcacagttagcggcctgcgtatcattgat gtcacctctcagaggatacgcatcacatggtcaccggtctccagggcaactggctacaag attacctggcgcagtggaaatggagtggagtcctcccgcacggtggccgctgatgtcact tccttcaccatcgacagccttcaggaagactcttcctaccgggtgtcagtctcctcactg attgggtctcgggaagggtaccccacctccctgaacaccagaacagactcagaccaggtg gtggtgggaacagtgacttcactcaaagcccaagagtcccgcggtgaggtcgtcagagta acatgggtgggcgtgcagggagcaacagcctatcgtgtggcttggaagcgaattgacggt ggggaggagaggagccagctggtaggtggtgacctcacagcggtggacctggagcagctg gacccaggggctcagtacgaggtgcaggtcatggccctggttcagaacagagagggatcc ccagtctctgtcagagtcacaacacctggggaacctgttgctgtagaccgggtggaaggg gtcagggtgctggaggctaccccaggggtgctgcgtctggtctggagaggaatggctggg gtcacagggtaccgcatctactggagatcagccctgggtgaggctgaatcgagccgtctg ataggtcgagatgcgacctcgtttgacctggatggtctgcggcctggggtgagctacaca atgaggctggctgccatcttcagggacagagagagtcaagctgtcactatcactgcctcc acagctcccctacagcctgtaacaggtctgcgtgtggcagagattacccagaattctgtg ttgttaggctgggttccactgactggtgccacaggatatatcctgcgctggaaagaggag agagatactggtccgggtcaatccaccacgctgcctgggtcatccagctcctacagggtg acagggctacgtctgggcctgagataccgcttcaccctgcagcccaacttccagagggag gtgggccctgagacctcagtggacgaacgcactgtgtgtgtgggtggtcgtctcgacgtg gtattcctggttccaggttccagggatcgggccagcctggctgattctctgctctccctc ctgaccagcgctgccggctccctcaccaccattggagaacgggactcacagctggggatt gtagtgtacagcgcccgacccaaggtctggttcctgctcaatcgccatagcaacagtgag acgctgcttcaggagatcctgtccacgccttttgaggacggcccagggaatgctataggc caggcaatgacgttcaccagacagttccttctcagccccacagctggtcgtagacccaga gttcctggtgcggtggtgatcattgcagatgaaaaatcctccgacaacgtcactggccca gccagtgttgtcaaagcctcaggtgtgacggtgctggcggtgggtataggtagggcggac tctgaggagctgcgccaggcagtgacagatggcagcacccagaaccttctatatgcccgt gatgccacccagctgggcaccctgcacgccgacctggctgacctgctgtgtggcgtcgcc aggataccagagggagtggggccagtgacagagcagtgtaccgtacagtgtcctcggggt gaccggggagagcgaggaggaaagggagagagtggaagagatggtgctgacggacgcaaa ggagagcctggtcgtgatggtttgcctggcagggatggccccagggggcctgaggggcga cagggtcagcctggccgaagtgaggacccctcagtgggggtcagaggggagaagggggag aggggttttcctggtctggatgggagtccagggttgccagggcgaccagggtccccaggc cctggaggtgtgccgggttcacaggggctaccgggtgtcagaggagatcccggtgatcct ggggttacaggagcaccagggacaaagggtgacaggggcgacaggggtgagccagggtca gctgtttcaggaggaggtctgcccgggaggaaaggggaaccagggatcccaggagtacca ggtaccctagggcgtccagggaatgacggggccaagggctttgtgggacctgcagggacc cctggacaggatggtcgcccagggataccaggcacccccggcctctccatcaagggagac aagggcagcaccggagagaggggacctccaggagtgggcagtggcttggctgtgaagggg gagaagggatcaccggggtctactggaaacccaggagctcagggttccagaggatctaca ggacaacaaggagccaaaggagacaagggggagagtgcagaggggttgccaggaccggct gggaaggcaggagagcctggtgatcggggtccccgtggccctgctggaagcattggactc aagggggaccggggccagccaggtgagcctggatcacaaggtgacaggggggagagagga cctgctggcttggcagcggagaggggggagagtggacagccaggctctacaggggctcca ggcctgaggggtttgcctggcgccagtggactaccaggggagaagggcagtgagggcgct aaaggagaacctggccggagtgggccaggattaagtgggaagaaaggtgaacagggtgag ccgggtctgccaggtccagaggggcccaggggccagaagggcgattcagcccagaaaggt gaaaaaggatccccaggtgctggctctcctggccaggctggatctaaaggagagcagggg gatcggggactctctggcttagctggaagaatggggatcaagggagattcaggtgaacca ggagagagaggggagacaggacgggccggacctgcaggaaagaatggcatcccagggaaa gagggagccaaaggagacaagggcgacgaaggcactcccggggagtctggactcccaggg aaggcaggggagagaggacttaggggccttgcgggtcagcctggacgagcaggagagaag ggagacctgggagaccctggagagcacggacgtaatggcagcccaggacctatcggacca agaggagagaaaggagttgagggagctcaaggccccccaggacctccagggaaagtgggc gatacagtgcaaaagcttaaaggagaaagaggagaaaagggagatgctggtgacccggga gagcatgggggcaaaggtcagaagggcgaggcagggtcctcaggggccgcggggctccgg ggtctcgagggacagcgtggacctccagggtcgagaggtgacacaggagagagaggaggc ccaggagacaagggagagagaggtgcgtctgggctggatggacgcaacggtctggatggc aaaccaggggcaccaggagcggccggcctgaggggagacccagggaaactaggagatcca ggaagagatgggctgccaggactaagaggtgtacagggcctcccaggccctattgggccc gctggaaatccaggcacacctggcaaagcaggagaaaatggaaaaccaggggctgctggg aaaatgggtgaggatggcgtaccaggggaagatggcagaaagggtgacaaaggagaggct ggggtttctggaagagacggccgtgacgggctgaagggggaccggggccttggcgggcct gcagggccaactggtctatctgggccccaaggggtccctggcaccatcggacctccagga caggtggtctatgcgaagggagctccaacaccatctatccctggccctcaggggcctcca ggaaccccaggtgtgcctggaatcccagggaccgtaggagctagaggggagagaggagca gtgggcagtaaaggtgaaaggggtgatccaggagaggacgggcaaccgggcaggcctgga acagcagtggatgtgcagaaggccctctctaaccttggcattgagatgcaggacctgaag gtgcttgtggataacagtaatgtgccgggcaagagtgtgctggagaaggctgagaagggc cagagaggagacaagggagaggccgggcagagaggaccagcagggatagatggtgcccgc gggctgtctggggagaggggtgtgaagggagagcagggggaacgggggcctgtaggggcc acaggacccacagggagggccattggagagaagggcccagtgggacccccaggacaggct ggagagcctggaaaacctggaatacctggagtaccagggagagccggagaactgggagag gctggacgacctggagataagggggagagaggagagaagggtgacaaaggagaggctggg aaaaacgggctaggtggctcagtgggacctcctggaccaaagggtgctgctgcagtagcg ggtgaagctggactccccggagcaaggggcctccctggggttacaggaccgaagggagag cctggcgcctcagggccacagggatccaaaggcgacaggggtattgcagggctccgtgga gataaaggtgatcggggtccatctggagaacagggacgcgatggttttcagggggcagca ggagaacctggcaaaccgggacaggatgggaagccgggcctgcctgggttccctggagtg ctggggagaccgggaaaccctggagaacctggaattagagggccaactggtccgatcggt accaatggacctccaggtccgtcaggggtaaagggtaatcaaggagtacctggggttggc gttcagggacttcctggtcccgaaggcagcatgggagtgcctggacctgcagggcctcct ggagctgtgggtccatctgggcctccaggtctaccagggcagacaggggaggggggcaag ccaggtgtcccaggaagagacgggatacctggaaaagagggaacaccagggttgccaggg aaacagggtatcgctggactaatggggtccgcggggttgaagggggagcagggggacagt ggccccccaggaaaggctgtagcaggaccccctggtgtgaaaggagcacagggacctcct ggtgtgaccttacctgggacagtgggagagagcgggctgccagggctacggggtgagagg ggagacaagggtcctgcaggcatcaaaggggacaggggagctgctggagaaaatggggag cctggagaagatgggggcagaggaccagcagggcctaaaggagacaagggagagagaggc atcggactggcagggcctcctggtcagctgggacctcaagggttaaatggggacacaggt ctcccgggcccagcaggccctccaggagcccagggcgtagcagggacccctggtctggcc ggcctgagaggagagaacggaactccaggacccccaggacctctaggacccaggggtatc caaggctttactggtcaggcagggacccctggagctcctgggcctcccggaccccctggc ctagttggttcaccgggcactgctggaggcaaaggggataagggagcgattggagccgga gtacctggattgagaggcgagagaggagacccaggacccaggggggaggagggtcgaggt ggtcagaacggggagagaggaccagcgggctctccaggtggcaaaggaggcaggggagat aagggtgaattggggctgcaaggtggcaaaggagaaaagggtgatactctcctggtggga ggacctacaggagagaaaggaaataaaggagagacgggtgaccgagggcccaaaggggtg cagggggagaaaggcttgaaaggcaatgacggcccagctggggagcagggtctgaggggt gagccaggagacaggggctctacagggttccagggagccagaggtccaggaggacagaag ggagaggcgggacagcctggtgtacctggagaatcaggtacaccaggaaaagatggaatg ccaggctttagaggggataagggagacgtgggaataactggaatgcgtggaattaagggt gaccgaggatcaaagggggcgtgtggatcagacggaccgaaaggagaaaagggagattca gggatccatgggaggtcagggttgcctggaaggaaaggtgagcagggagacttggggcct ccaggggccattggaacccctggcaaggagggactgatcggccccaagggtgaccgaggc attgatggagtactaggacccaaaggaacgcagggagagaagggcgaaaggggcccctcg ggtatccctggccctccgggccccacaggagtggacggggcctctggactgacagggcct caggggcccgctggagctaagggcccagaagggctccaaggacagaagggggagaggggg cctattggtcctgccaagattggtccacgtggtatcccaggtataccaggagaaagaggc gggcagggcgagttgggtctagatggagccaagggagacagaggagagccaggcttgacg gaggatgagattcgtgcatacgtccgcacagagatgagccaacactgtgcttgtggaggt attgttgtgacagaaaccctgcccagccccagggtacgtcctgctccagagcaacagctg gcccggaagggcaagcagggcaaggacgggcgtgagctgcgtgtagtggtgaacaccaac gaccccgactacgaacacttctactctatagagagttacgacgaccccatggccatggag cagagcatccacctgactcccactgccaatcagagccatggtgagagagtcactgttgac cctctgaaaacaaagaggcccaggagagaggtcaaagggcaagctccagtggatccttgt gtgttgcccctggaggagggaaactgtgggagatttactctgcgctggtactttaacagc caggtccaggcctgccgacccttcatctacagcggctgtgagggcaacgccaaccggttc ctccagcaggagacctgtgaggagcgctgccttggggaggacacaggtgatgttcctttg aagaaggggcgatga

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