Salmo salar (Atlantic salmon): 106565638
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Entry
106565638 CDS
T04363
Symbol
ap5b1
Name
(RefSeq) adaptor related protein complex 5 beta 1 subunit
KO
K19022
AP-5 complex subunit beta-1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106565638 (ap5b1)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
106565638 (ap5b1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
DUF190
Motif
Other DBs
NCBI-GeneID:
106565638
NCBI-ProteinID:
XP_013988435
UniProt:
A0A1S3LC71
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Position
ssa12:60289596..60293404
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AA seq
984 aa
AA seq
DB search
MTTALKTSQHIVLKAIFGSTMSANWPERISAFLRSPSQFLCSTTSDIFLAEVLHELRDDR
ASDQIKVLLLSPLLEHPTLLCPSVSVGEETALELMSVFAQCSPKSLPLRCNVLLALTSVL
LCSCCVSSHTSASQDFLDLLLQMAQDTNDAQAGAALHPLRTTACDCLRELEACLPGLLSQ
RLELLSSLRQQENSRLHQAYTGLHALALRNAVYLLTQQKGAGAGDLKAALGSNEGFVWGE
GADSAHPNSVSHSDLALFSPLTLGPMGKVPSLQTGLDCKELRSLLSSLLEESYLLTSLSQ
AALLRCLVEVLAMVPAVSPTIFRAQLLRLLGTCKVCLLHTTLLMKAAFTDSLFSAEDEAF
LLKRLVGLSQHPLLSTPEKLFYMDCILHFPENRPISSGDESLPVLLTPRLAAALVPTVFN
DSVSMLARLNLLSLVYLEEGEEDREGQGGRGLAYLYDHLTSLLRIVENQASREMVVTFFR
ASFLFLLHFCHVERYSEDLSQKLCDLYLRRTQLAPHFINLADRTQDRLEESGWAVALLRA
LQRTITEAPLSQLTLQDLRWHLRILARVAEEGEVLQRATLNFLLCVITSSSSALCVSGDW
RLGNGVLGVCRRLLLHPSLDSLLTPLADLLQHLTCHYGETDIQDHARLYYTLLTTLSQEK
LAGVLAQRGTERGRQAKVRSLSAIMGETEELTSGLTVHQTERPLLRLVKLDKHEPDECKP
EHKPDSEPACETESSPGQGGIEDYRAQFESSSFASEITLQYHLTHTGVHDPHFDKLFSIR
LHFDLTDGHYEEVSDISVPCLFRTRKPPTVRLRLKPKQPYHTTLRASAIFTTEDGLSWHS
PLADLHVAFPEVFLPLLAPLGWAREKKQRVFEGIWGEICSEQSEGDLTNAATSLFCDQLE
ESAVGELVEKHFQRYLVSDLDKGRCKVLFFLPPQSHVLLKVITEEDAVQVHIATDNWKLL
PYINSYLEDITKEIHSTQQVNGDV
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgctttgaagacatcacaacacattgttttgaaggctatattcggttcaacc
atgtcagcgaactggcccgagaggatctccgcattcttgcgcagcccgtcccagttcttg
tgcagcacgacatcggacatcttcctcgctgaggtcctgcacgagctgcgagatgacagg
gccagtgaccaaatcaaggtcctgctgttgtccccgctacttgagcaccctactctgctg
tgcccctctgtctctgtgggcgaggagaccgccctggagctcatgtctgtgtttgcccag
tgctcccccaaatccctcccgctccgctgcaacgtcctcctggccctcacctccgtgctc
ctctgctcctgctgtgttagctctcacaccagcgcctcccaagacttcctggaccttctc
ttacagatggctcaggacaccaacgacgcgcaggctggggctgcattacaccccctgagg
acaacagcctgcgactgcctgagggagctggaggcttgcctcccgggcctactatcccaa
cgcttagagctcctgagcagcctgaggcagcaggaaaactccaggcttcaccaggcctac
acggggctccatgccctggcactgaggaatgctgtgtatctactcacccagcagaaaggg
gctggggctggagacctgaaggctgcactggggagcaacgaggggtttgtgtggggggag
ggtgcagactccgcacacccgaactctgtgtcacactcagacttggccctcttctcgccc
ctcactctgggccccatgggaaaggttccttccctgcagacgggcctagactgtaaagag
ctgagatcgctactctcctccctcctagaggagtcctacctgctcacatccctatcccag
gctgccctgctgcgatgtctggtggaggtgcttgccatggtgcccgccgtctccccgacg
atattcagggcacagctgctgcgtctattgggcacatgcaaggtgtgtcttctgcatacc
actctgctgatgaaggctgctttcacagacagcctgttcagcgcagaggatgaagccttc
cttctaaagcgtctcgtcggcctgtcccaacaccccctactgagcacgcctgagaagctc
ttctacatggactgcatcctgcacttcccagagaaccgaccaatcagcagtggcgacgag
agcctgcctgtgctcttgacccctcggctggccgcagccctagtgcccactgtgttcaat
gatagtgtcagcatgctggctagactgaacctactctctctggtctacctggaggaagga
gaagaagacagggagggacagggggggagaggcctggcctacctgtacgatcacctgacc
tcccttctccgtatcgtggagaaccaggccagtagggagatggtggtgaccttcttcagg
gcttccttcctctttctccttcacttctgccacgtggagcgctactctgaggacctgtct
cagaagctgtgtgacctgtacctcagacgcactcagctggcccctcacttcatcaacctg
gctgaccggacccaggaccggctggaggagtcaggctgggctgtggcactgcttagagcc
ctgcaaagaaccatcacagaggccccgctgtcccagctcaccctgcaagacctccgctgg
cacctcaggatcctggcccgcgtggcagaggaaggggaagtcctccagagggccactctc
aactttctgctgtgcgtcatcacttcctcttcatccgcgctgtgtgtgagcggggactgg
cgtctggggaacggtgtgctgggggtgtgtcgacgcctgctcctgcaccccagcttggac
tcccttctcacaccgctggctgatctcctacagcacctcacctgtcattatggtgaaaca
gacatccaggaccacgcccgcttgtactacaccctcctcaccactctctcccaggagaag
ctggctggggtgttggcacagaggggaacagaaagggggcggcaggccaaagtgcgctcg
ctgtctgccatcatgggcgagaccgaggaactgaccagcggtctgaccgtgcaccagaca
gagcgaccgctgctgaggctggtcaaactggacaaacatgaaccagatgaatgcaaacca
gagcataaaccagacagtgaaccagcctgtgagactgagagttccccaggacagggtggg
atagaggactacagagcccagttcgagagttccagcttcgcctctgaaatcaccctccaa
taccacctcacacacactggagttcacgacccccattttgacaagctcttcagcatccgc
ttgcactttgacctcacggatggccactatgaggaagtgagtgacatcagcgtgccttgc
ctgttcaggaccaggaagccccctacagtgaggctgaggctgaagcccaagcagccgtac
cacaccaccctgagagctagcgccatcttcaccacggaggacggcctctcctggcactcc
ccgctggcagacctacatgtggccttccctgaggtgtttctgcccctcctcgcaccccta
gggtgggccagggaaaagaagcagagggtgtttgaggggatctggggtgaaatatgctca
gagcagtctgagggggatttgaccaatgctgcaactagcctgttctgtgatcagttggag
gagtcggctgtgggtgagctggtggagaagcactttcagagatatctggtctcagacttg
gataaaggcaggtgtaaagtgctgttcttcctcccaccccagtctcacgtgctgctgaag
gttatcacagaggaggatgccgtccaggttcatattgctacagataactggaagcttctg
ccttatattaactcttatctagaggacattaccaaagagattcacagcacacagcaagtc
aatggtgatgtctga
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