Salmo salar (Atlantic salmon): 106565679
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Entry
106565679 CDS
T04363
Name
(RefSeq) integrin beta-7-like
KO
K06590
integrin beta 7
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04514
Cell adhesion molecules
sasa04672
Intestinal immune network for IgA production
sasa04810
Regulation of actin cytoskeleton
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106565679
04514 Cell adhesion molecules
106565679
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106565679
09142 Cell motility
04820 Cytoskeleton in muscle cells
106565679
04810 Regulation of actin cytoskeleton
106565679
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
106565679
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106565679
04515 Cell adhesion molecules [BR:
sasa04515
]
106565679
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106565679
Cell adhesion molecules [BR:
sasa04515
]
Integrins
Integrin beta subunits
106565679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_2
I-EGF_1
EGF_integrin
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
106565679
NCBI-ProteinID:
XP_013988519
UniProt:
A0A1S3LDF1
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All DBs
Position
ssa12:59153718..59160122
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AA seq
689 aa
AA seq
DB search
MDIINPRSDPVFLKNNDLSSNSDNVVQLKPQNLLFKLRVGVPQTFNVSFKRAEGYPIDLY
YLMDLSFSMKDDLDTIKNLGQDILYALKKVTQKVRIGFGSFVDKVALPYVSQVKAKKNNP
CPNRLNTCQPAFSFQNILRLTEDADKFKTRVSDQIISGNLDSPEAGFDAIMQAAVCQSVI
GWNNVTRILVYTSDDTFHIAGDGRLAGIFEPYDGMCHLNDTGFYDSTKYDYPSVGQLARV
LAANNIQLIFAVTEDSVAAYKALSKLIPQSVVGVLKNDSSNVVLLISEAYNNLSSTILLE
HHEAPSGLDLTYRSHCTPEKGDNTPWQRRGECMNVKLNQQVNFTVSLNISTCLKEKQTFS
LKLQGISETLKVSVETLCDCDCQDREEQSSHCNENGTLTCGICSCDEGHLGQRCDCERPK
DMTSADSMAATCRQDNSSQLCSGHGSCECGKCICWGTHHDKFCQCDDNSCARHNNMLCGG
NGQCDCGTCKCNANYTGSACDCSTLTDQCRTVGKLCNGQGTCQCNQCQCTKDFFGINCSK
IADACPKFLECVTCELNNKKSSGLMSNCSQLCGSVKLTWMKGPQEFPCSKDTISYKVELL
PDGNILIFYADLPRSIDRTYVIIGSSVSSIIFIGIAVILISRLMLEFHYRREYDSFLKAK
EAEVWEDTKNPLFQDATTVVMNPMHIQED
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatcaacccccgatcagatccagtctttctgaagaacaatgatctcagcagc
aactcagacaatgtggtccaacttaagccacaaaacctcctcttcaaactcagagttgga
gtccctcagaccttcaatgtgtcattcaagagagccgagggctaccccatagacctgtac
tacctgatggacctgtccttctccatgaaggacgacctggacaccatcaagaacctaggc
caggacatcctctatgcgctgaaaaaagtcacccagaaggttcgcataggcttcggctca
tttgtagacaaggtggctctgccatacgtcagccaggtgaaggccaagaagaataacccc
tgtcccaaccgcctgaacacctgtcaacctgccttcagcttccagaatattctgagactc
acagaagacgcggacaagttcaagaccagggtcagcgaccagatcatctctggaaacctg
gactcccccgaggcaggctttgatgcaatcatgcaggcagctgtctgccagagtgtgatt
ggttggaacaatgtcacccggatcctggtctacacatcagatgacaccttccacattgcc
ggggatggcaggctggctggtatattcgagccttatgacggcatgtgccatctcaatgac
actggcttctacgatagcactaaatatgactacccttcggttggccagcttgccagggtc
ctggcagccaataacatccagctcatctttgctgtcaccgaggacagtgttgctgcctac
aaggcattgagtaaactaatccctcagtcagtggtgggagtcctgaagaacgactccagc
aacgtggtcctgctcatctcagaggcctacaataacctgtcctccaccatcttactggag
caccatgaagctccctcaggtctggacttgacctacagatcccactgcacccctgaaaaa
ggggacaacaccccatggcagaggaggggcgagtgcatgaatgtcaagctcaaccagcag
gtcaacttcacggtaagcctgaacatttcaacatgtctgaaggagaagcagacgttttcc
ctaaaactgcagggcatcagcgagaccctgaaggtctctgtggaaaccttgtgtgactgt
gactgccaagacagagaagagcagtcctcacactgcaatgaaaatggaacgctcacctgc
ggcatctgcagctgtgatgagggtcacctgggtcagaggtgtgattgtgagcggcctaag
gacatgacctctgccgactctatggccgcaacatgtcgccaagacaactcctcgcagctg
tgcagcgggcatgggagctgtgagtgtggaaagtgtatctgttggggcacccaccacgac
aaattttgccaatgtgatgacaacagctgtgcccgccacaacaacatgctctgcggtggt
aatgggcagtgtgactgtggaacctgtaagtgtaatgccaactacacaggctctgcatgt
gactgttccacactcaccgaccagtgcaggactgttgggaagctgtgcaatggccaggga
acatgccagtgtaaccagtgccagtgcaccaaagacttctttggcataaactgctcaaag
attgctgacgcatgcccaaaattcctggaatgtgtgacatgtgaattgaacaataagaag
agtagcggcctaatgagtaactgcagccaactctgtggctcagtcaagctcacttggatg
aagggaccccaggagttcccctgcagtaaagacaccatctcctacaaagtagagctgttg
cctgatggcaacatcctgatcttctacgcagatctgcctcgctctattgacaggacttac
gtgatcatcggcagctctgtgtccagcatcatcttcatcggcatcgcagtgatcctcatc
agcaggcttatgctagagttccactaccggagagagtatgacagcttcctcaaagcaaag
gaggccgaagtctgggaagatacaaaaaatcccttgttccaggatgccacgaccgtggtt
atgaaccccatgcacatacaagaggactga
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