Salmo salar (Atlantic salmon): 106565722
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Entry
106565722 CDS
T04363
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00510
N-Glycan biosynthesis
sasa00513
Various types of N-glycan biosynthesis
sasa01100
Metabolic pathways
sasa04141
Protein processing in endoplasmic reticulum
Module
sasa_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
106565722
00513 Various types of N-glycan biosynthesis
106565722
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106565722
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GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
HSM3_N
Mfa_like_2
Motif
Other DBs
NCBI-GeneID:
106565722
NCBI-ProteinID:
XP_013988611
UniProt:
A0A1S3LCC6
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Position
ssa12:complement(74246359..74256949)
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AA seq
640 aa
AA seq
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MTCLYIIGVDMAQPRVFCLVLLTVALGAQALTPSHHLSLSDVERLKGLLSQPFTDLASAY
YSIVXLSKLGASVADENDACQFLKAQLDPMSVDSLFFAAEASQAISDCEMPVSNETRDIL
LAAVSEDSTVTQIFRAVSALSSLGLPLASQEVVAALVARIAKEDNVLAITTALQTATRLS
QQAELGGILEEIEDLAARLDDLGGVYLQFEEGLEATALFVTAAYTLSDHTDTEPPLKEDQ
VIQLVNSVFSKKSWDSLSEAFSVACAAAALSSNRFHVPVIVSTQGPATVSHSQPILHLLV
TDILSNPLASANVLVESAQAVASKSVVLSQAPFSLRDGIFELNFMASQPASGYYQFTVAV
TGDSRLVANQVELKVKVSTEVAITNMDLSVVDKDQSIGTKTSRVDYPFKAKGSFTADSHQ
NFAMTFQLVDVITGVELTPHQTFVRFHNQKTGQEVVFVAEPDSKNLYKFELDTAERKSEF
DSMSGTYVLHLIVGDATLENPILWNVADVVLKFLDEEAPAAIQSKTLYMPKPDIQHLFRE
PEKKPPTVVSNTFTALVLSPFLLLLILWFKLGANISNFSLSPSSVLFHVGHACMLGLMYV
YWTHLNMFQTLKYLAIIGSLTFLAGNRMLAQKAVKRLASK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacctgtctatacatcattggagtggacatggcccagcctcgtgtgttctgcttggtc
ctcctcaccgtggctctcggggcccaggcgctgaccccatcccatcacctctccctgtca
gacgtggagagacttaaaggcctcctgagccaacccttcacagacctggcatcagcatac
tactccattgttngtttgagcaagcttggagcctcagttgctgatgaaaatgatgcctgt
cagtttctgaaggcccaattggaccccatgagtgtcgactccctcttctttgctgctgag
gccagtcaggccatctcagactgtgagatgccagtatccaacgagacccgtgacatcctt
ctggcagcagtcagcgaggactctacagtgacacagatcttcagagctgtcagtgccctc
agttccctggggcttcctctggcttcacaggaagtcgtcgctgccctcgtcgcccgtatt
gccaaggaggacaacgtcttggcgatcactactgcactccagactgccacccgtctctcc
cagcaggctgagctcggaggaatcctggaggagattgaggatctggcagcacgattggat
gacttgggtggagtgtacctccagtttgaggagggacttgaggcgaccgccctctttgtg
acagcagcctacacactgtcagaccatacggacacggagcctcctctgaaagaggaccag
gtgatccagctggtgaactctgtgttcagtaagaagtcctgggattccctgtctgaggcg
ttcagcgtagcctgtgctgctgctgccctctccagcaaccgcttccacgtgccagtcatc
gtcagcacccaggggcctgccacagtctcccacagccagccaatcctgcatcttctggtg
acagacatcctgtccaatcctcttgcctcagccaatgtgctggtggaatctgctcaagct
gtagcctctaagagtgttgtactcagccaggcacctttctccctcagagatggcattttt
gaactgaacttcatggctagccagccagccagtggatattaccagtttactgtggctgtc
accggggacagccgattggttgccaatcaggttgagctgaaagtgaaggtgtccactgag
gtagccatcactaatatggacctctctgtagtggataaggaccagagcatcggcaccaag
acatccagggtcgactatcccttcaaggccaagggctcctttactgcagacagccatcag
aactttgccatgactttccagttagtggatgtcatcactggagtagagctcacgccccac
cagacctttgtgaggtttcacaatcagaaaactggccaggaggttgtgtttgttgctgag
cctgacagtaagaacctttataagtttgagctggacacagcagagaggaagtctgagttt
gactccatgtctgggacctatgtcctccacctcatcgtgggagacgccaccttggagaac
cccattctgtggaacgtggctgatgttgtcctgaagttccttgatgaggaggccccagca
gccatccagtccaagaccctttacatgcccaaaccagatattcagcacttgttccgggag
cctgagaagaagccacccacagtggtgtccaacaccttcacagccctcgtcctctcaccg
ttcctcctgctgcttattctgtggttcaaactcggggccaacatctcaaacttcagcctc
tcccccagctctgtgctcttccatgtgggccacgcatgcatgctgggtctgatgtacgtc
tactggactcacctcaacatgttccagaccctcaagtacctggccatcatcggcagtctc
accttcctggctggaaaccgcatgctggcccagaaagcagtgaagagacttgcaagtaaa
tga
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