Salmo salar (Atlantic salmon): 106565727
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Entry
106565727 CDS
T04363
Name
(RefSeq) contactin-4-like
KO
K06762
contactin 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106565727
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
Contactins
106565727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
V-set_CD47
Tissue_fac
C2-set
Pur_ac_phosph_N
C2-set_2
fn3_2
fn3_4
Motif
Other DBs
NCBI-GeneID:
106565727
NCBI-ProteinID:
XP_013988624
UniProt:
A0A1S3LDQ0
LinkDB
All DBs
Position
ssa12:73693284..73942568
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AA seq
1029 aa
AA seq
DB search
MMLLWKLLVLKSLMGCLAESSVLQSPVFTKQPGSIVFPVDSQENNRDVVFSCEAQGSPSP
LYRWKLNGTAITPKSGSHYSLSGGNLRISHLNKDQDAGTYQCLASNSFGTIVSREASLTF
AYLGNFKTHRRNSVSVREGQGVVLLCGPPSHSGDLTFSWIFNEYPSFVKQDTRRFISQET
GNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGIMGEYEPKIEVQFPEIVH
VAKGLTVKLECFALGNPVPSINWNRVDGIPFSRKVDVRKASGVLEIPYFQQEDAGTYECV
AENSRGKNTVKGKLSFYAPPHLIEKPEDVQKPIDDSLVWECKATGKPKPSYRWMKNGENL
ESLEERIQVANGALSISRLTLSDIGMYQCVAGNKHGEVYSNAELRVIAVAPDFSQNQLRS
PTMVKEGGDVLIECRPKMSPWGVISWRKGSEALRESHRVSILDNGNLRIQNSTRPDAGLY
TCVARNQFGVASSSGTLMVKEPTIITTAPSTLDVTVGESIVLPCQVTHDPSLKLMFTWFF
NEQLIHFGNHGGYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAADLVVRG
PPGPPTSIHVEEISDTTASLSWRPGPDNHSPITTYTIQARTPFSLGWQAVTTVPEVVGGR
SLTATVIDLSPWVEYEFRVLASNAIGTGEPSKPSKQARTKETSPKVTPANVSGGGGSRSE
LVITWEPVPEELQNGGGFGYVVAFRPSGTTGWMQAAVPSSEASKYVFKNESIQPFSPFQV
KVGVYNNEGEGPFGPVITIYSAEEEPGRAPTRIRAKSLSASEIEVSWKALPWNTSKRRVL
GYELRYWEKREKEEAASVQRTVGNQTSAIIRGVRGSNTYYVTVRAYNTAGAGPPSVTVNV
TTKKPPPSQPPVKVMWNTLNSKIVLNWEQVKALENESEVTGYKVLYKRNRHSRPSVMETN
TTSVELSLPMNEEYFIQIKPFGEGGEGSSSRQITIPRIPGPNAIGSATKVSTLSALSTIA
LSFTARTSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctggtgctgaagtcactcatggggtgcctggcagagagc
agtgtcctgcagagcccagtgttcaccaagcagcctggcagcattgtgtttcctgttgac
tcccaggaaaacaacagagacgtggtgttcagctgtgaggcccagggaagcccatctccc
ctttatcggtggaaactgaatggcaccgcgatcactcccaaatcaggctcacactatagc
ctgtctggaggcaacctccgaatcagccatttaaacaaagaccaggatgctggaacatat
cagtgcctcgcctccaactcttttgggaccatcgtgagccgagaggccagtctaaccttt
gcatacttgggaaacttcaagacccaccgaagaaactcagtgtcagttcgcgagggacag
ggggtggtgctgctgtgtggtcccccatctcactctggagatctgacattctcctggatt
tttaatgagtatccctcgtttgtgaagcaggacacacgacgctttatctcccaggagacg
gggaatctatacatcgctaaagtggagccttctgatgtgggcaactacacctgtgtggtg
accaatactgtcaccaaaaccagagtccagggcccgcccacgcctttggtgctccgcagt
gatggtataatgggtgaatacgagccgaagatcgaagttcagtttccagagattgtccat
gtagccaaaggattgacagtgaaactggaatgttttgcattaggaaaccctgtcccctct
ataaactggaatagagtggacggaatccccttttctaggaaggtggacgtgaggaaagcc
agcggcgtcctggaaatcccttatttccagcaggaagacgcgggcacatacgagtgtgtg
gcagagaactccagggggaagaacactgtaaaaggaaagctttcattctacgcccctcca
catctgatagagaaacctgaggatgtgcagaagcccattgacgactctctggtgtgggaa
tgcaaggccaccgggaagcccaagccctcctataggtggatgaagaacggagagaacctg
gagtcactggaggagcgcatacaagttgccaatggagcgttgtcaatcagccggctgacg
ctgtccgacattggaatgtatcaatgtgtggctggaaacaaacatggggaggtatactcc
aatgcagagctcagagtcattgctgttgccccagatttctcccagaaccagctgaggagc
cccaccatggtgaaggagggaggagacgtgctgatcgagtgccggcccaagatgtccccc
tggggcgtgatctcctggaggaagggcagcgaggctcttcgagagagccacagagtttcc
attctggataacggaaacctccggatacagaattcaaccagaccagatgcaggcctttac
acgtgtgtggcaagaaaccagtttggagtggcaagcagctccgggactctcatggtcaaa
gagccgaccattataacaacggcaccgtccaccctggacgtgactgtaggagagagcatc
gtgctgccgtgtcaggtgactcatgacccgtctctgaaactcatgttcacctggttcttc
aacgagcagctgatccactttggcaaccacggcggatactttgaaaaagtgggcggtcag
cattcggctggggacatcatgattcggaacatccagctgagacatgcagggaagtacacc
tgtgcagtgcagaccaaggtggacagtatctccatcgcagcagacctggtggtccgaggt
cccccaggcccacctaccagcatccatgtagaagaaatcagtgacaccacagcctctctc
tcctggagaccggggcctgataatcacagtccaattaccacatacactatccaggccagg
acacccttctccctgggctggcaggctgtcaccacagttcctgaggtggtggggggccgc
agtctgacagctacagtaatagacctgagcccctgggtggaatatgagttcagagtcctg
gcaagcaacgccattgggaccggggagcccagcaaaccatccaaacaagcaaggacaaag
gagacatctccgaaggtcacaccagctaatgtgagcggaggtggaggcagtcgctcagaa
ttagtcatcacttgggagcctgttcctgaggagctgcagaacggaggagggtttggctat
gtggtggccttcagaccgtccggaaccacaggctggatgcaggctgccgtgccctcatca
gaagcctccaaatatgtctttaagaacgagagcatccagcccttctcccccttccaagtg
aaggttggagtgtacaacaatgaaggggaaggcccattcggacccgtcatcaccatctac
tctgcagaggaagagcctggaagagcgcccaccaggatccgtgccaagagtctgtctgcg
tctgagattgaggtttcatggaaagccctgccttggaacaccagcaagagaagagttcta
ggctatgagttgaggtactgggagaagagagagaaggaggaggcagccagtgtccagagg
acggtagggaaccagacgtcagccattatccgaggggtgagaggaagtaacacttactac
gtcacagtgagagcgtacaacacggccggggctgggcctcctagtgtcactgtcaatgtc
accaccaagaaaccaccgcccagccagcccccggtgaaagtgatgtggaacacattgaat
tccaagatagtcctgaactgggagcaagtcaaggccctggaaaatgagtcagaggtcact
ggctacaaagtgctctacaagcgtaaccgacacagccgccctagtgtcatggaaaccaac
acgacgtcggtggagctctccctgcctatgaatgaggagtacttcatccagatcaaacca
tttggggaaggaggagaggggagcagtagcagacagatcaccatccccagaatacctggt
cccaatgcaattggctcggcgaccaaggtctctactttatcagccctcagtacaatagca
ttgtctttcacagcgcgaacatcgttatga
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