Salmo salar (Atlantic salmon): 106565730
Help
Entry
106565730 CDS
T04363
Name
(RefSeq) contactin-3-like
KO
K06761
contactin 3/4/5/6
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106565730
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sasa00537
]
106565730
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
Contactins
106565730
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sasa00537
]
Others
106565730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
Pur_ac_phosph_N
C2-set_3
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
106565730
NCBI-ProteinID:
XP_013988636
UniProt:
A0A1S3LCF2
LinkDB
All DBs
Position
ssa12:complement(73147220..73232146)
Genome browser
AA seq
1030 aa
AA seq
DB search
MMLLWKRLLLLSIIGCLAAHAQDVLFQGPRWRTEPSDLILPNNSPDQEATITCEAEGKPS
PEYRWSLNGTLIDLGSDYRRHMSGGNLIINSLDRDQDTGIYQCTAFNTWGIILSCRATLQ
FAYLDNFKTQTARSAVNVREGQGVVLLCGPPMHSGELTFAWIFNEYPYFVQQDSRRFISQ
ETGSLYIAKVEPSDVGNYTCVVNNSITKGKVLSSPTPLVLRNDGAMGEYEPKIEVNFPDT
VPAAKGSTVKLECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPHFQQEDTGTYE
CVAENSRGKNAARGRIAFQAKPHWLQTMIDGALSIEDNLFWECKANGKPKPSYSWLRNGD
NLMAEGRVQIENGALSIAALNLSDAGMYQCVAENKHGIIYSSAELMVLASPPSFSKNPLK
PLLKARSGSEVVLECKPQASPRAISLWKKSNEIVQKNERITLLANGTLKIVNATRRDAGS
YTCIAKNQFGTASTTGRLLITEPTRITQRPANMEIIVGESIVLPCQIASDPALDVSFSWE
FNGQLIDFHRDADHFDRVGGSISGDLMIRNIQLNHGGKYVCVIDTDVESLSASAILVVKG
PPGCPDTVAVEEITDSTAQLSWSPGRDNGSPITGYIIQARTPFTVGWQAVDTVPEVINGN
TLTATVVGLNAWVEYEFRVVARNSVGMGEPSPASAKTRTEDTMPDTAPTDVGGGGGTKSE
LVITWEPVPEELQNGEGFGYIIAFRPLGAITWTRVVISTPGVARYIFRNDTIPPFSPFDV
KVGAYNKRGEGPFSSIATVFSAEEVPIEAPKRVWGRSVSAATIEVIWEALPVTPERVLGY
EVVYWEDDTKPDTVGKVRTSGNYSAVNVTGLSANTQYYLAVCAFNTAGTGPQSTHINATT
KKPAPGQPPLNVEWTMIGSLLTLHWGPVIAMETEAEVIGYLVLLRRHRYNDVNSIITNKT
RMELTLSPNDNYLIQIKALSEGGEGVGSEPIHIHKLSMGARGSGASSLNPLLLSHFSAFL
ISALLLNTSW
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgatgttactatggaaacgacttctgctactgtcaatcattggttgccttgccgctcat
gcacaagatgtcctgtttcaagggccaagatggaggacagagcccagtgacctcattctc
cccaacaactcccctgaccaggaagccaccattacatgtgaggcagaggggaaaccctcc
ccagagtacagatggtcgcttaacggaacactcattgatcttgggagtgactaccggcgt
cacatgtctggaggcaacctgatcattaacagtctggacagggaccaagacacggggata
taccagtgcactgccttcaacacatgggggatcatcctcagctgccgagccactctacaa
tttgcatacctagataacttcaagacccaaactgcacggagtgctgtcaatgtccgagag
ggccaaggagtggttttgttatgtggaccacccatgcattctggagagctgacgtttgca
tggatcttcaatgagtacccctattttgtccagcaagatagtcgtcgattcatctcccag
gagacaggaagtctgtacatcgctaaagtggagccttctgatgtgggcaactacacctgt
gtggtcaacaatagcatcactaagggcaaagtcctcagctctcctacaccactggtcctg
aggaatgacggagcaatgggtgaatacgaaccgaaaatagaagttaatttccctgacact
gttccagctgcgaagggatccacggtaaaactagaatgcttcgcactgggaaacccagtc
ccagaaataagttggaggagaaccagcggcgtcccatttcccagtaaggtgaagatgaag
aactccaatgctgttctcgaaattccacatttccagcaggaagacacagggacgtatgag
tgcgtggcagaaaatagccggggaaaaaacgctgcacgaggtcgtatcgccttccaggcg
aaaccccattggctgcaaacaatgatcgacggggccctgtccattgaggacaacctgttc
tgggagtgtaaggcaaacggaaaacccaagccctcctacagttggctgaggaatggagac
aacctaatggcagagggccgggtgcaaatcgaaaacggggctctctccatagcagcatta
aacctgtcagacgccggaatgtatcagtgtgtggctgaaaacaaacatggcattatttat
tccagcgctgagctaatggtgttagcatcacctcccagtttctccaagaatccactgaag
cccctgctgaaagctcgctcaggcagtgaagtggttctggagtgcaagccccaagcctcg
ccccgggcaattagcctgtggaagaaaagcaatgagatcgtgcagaaaaacgagaggatt
actctgcttgccaacgggacactgaagattgtcaatgcaaccagaagggatgcggggagc
tacacatgcatcgctaaaaatcagtttgggactgcaagcaccaccggaagactccttatc
acagagcccaccagaatcacccagaggcctgctaacatggagatcattgttggtgagagt
atcgtgctgccctgccaaatagccagcgatccggccttggatgtgtctttctcctgggaa
tttaacgggcagctcatagacttccacagggatgccgaccatttcgacagagtaggaggg
agcatttcaggagatctgatgattcgtaacatccagctgaatcacggggggaaatatgtc
tgtgttatcgacaccgacgtggagagcttgtccgcttcggccatcttggttgtgaaaggt
ccccctgggtgcccggacacagtagcagtggaggagatcacagatagcacggctcagctc
tcttggagccccggcagggacaacggcagccctatcaccggctacatcatccaagcccgg
acccccttcactgtgggctggcaggctgtggacacagttcctgaggtgatcaatggcaac
acactgacagccactgtggtgggcctgaacgcctgggtggagtatgagttcagggtggtg
gcccgcaacagtgtgggcatgggagagcccagtccagcctcagccaagaccaggacagag
gataccatgcctgatacagctcccactgatgttggaggcggaggaggcacaaaatctgaa
ttagtgataacttgggagcccgtgcctgaggaactgcagaatggagagggcttcggttac
atcatcgccttccggccgctgggtgccatcacctggacacgagtggtcatctccacgccc
ggggtggcccgatacatcttccgcaacgacaccatcccgcctttctcgccgtttgatgtg
aaggttggggcgtacaacaaacgtggggagggccccttcagttccatagccacagtgttc
tcagcagaggaagtaccaattgaggctcctaagagggtttggggcaggagtgtatctgca
gctacaattgaagtgatctgggaagccctccccgtcacccctgaaagagtgctgggttat
gaggtggtgtactgggaagatgacaccaagcctgacacagtaggcaaagtgagaacctct
ggaaactactcagcggttaatgtgactggactgagcgctaacacacagtattatctagct
gtgtgcgcctttaacactgcagggacagggccacagtctacacacatcaacgccaccacc
aagaagccagcaccaggccagcctcctttgaatgtagagtggaccatgattggctctctg
ctcactctacactggggtcctgtgatagccatggagacagaggcagaggtcatcggatat
cttgtgctgttgagaagacaccggtacaatgacgtaaacagcatcataacaaacaaaacc
aggatggagctgacgctgtctcccaacgacaactacctgatccagatcaaggccctgagt
gagggcggtgaaggtgtgggcagcgaacccatccacatccacaaattaagcatgggcgca
cgaggctcgggagcgtctagtctcaatccactattgctgtctcatttctctgcattcctc
atcagcgctctcctcctcaacacctcctggtga
DBGET
integrated database retrieval system
