Salmo salar (Atlantic salmon): 106565902
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Entry
106565902 CDS
T04363
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5-like
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106565902
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106565902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
HDA2-3
ResIII
PHD-1st_NSD
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
106565902
NCBI-ProteinID:
XP_013989046
UniProt:
A0A1S3LDL2
LinkDB
All DBs
Position
ssa12:62900756..62950219
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AA seq
2062 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDEIPDEDEEGEHNTVPLTPLDSFFSDDDSLKQLKKKKPKKMK
EGKMPKVKKRKKEGGGGGGIGVGGNDPEEQVSEREDDHPLRRPEIGSESESSTYAPAPTT
KKKKKKPKEKKEKKPKRKKREEEEEDDDDDDGDDDDDDDDDENNKEPKSSSQLMQEWGLE
DVQYGFTEEDYTTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGSKWREFSANNPFKGT
SATAVAAAVAAAVEMVTVASPISVKEVTTLPSSQPGPIRKAKTKDGKGPGVRRKTKTVKE
VKKKSKGKKTKSKKKASSSEEDFGLEESDFDDVSIHSASVRSDTSGNAKKKARKGRKKRK
REDGDGYETDHQDYCEVCQQGGEIILCDTCPKAYHLVCLDPELEKAPEGKWSCPHCEKEG
IQWEAKDDDDDEEEVAVEEEDDHLEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPN
GEWLCPRCMCPPLKGKVQRILHWTWGDPPLPTEVPPGPDGEVVDPLVKPPLKGHPERELF
VKWAGLSYWHCSWVSELQLELYHAVMYRNYQRKNDMDEPPPYDYGSGEEELNNEKRKSKD
PQYAAMEERFYRYGIKPEWMVIHRILNHSYDKDGDVHYMIKWRDLPYDQCTWEVDDFDVP
EYNHSKHSYWDHREQMIGDDQRPLVVRKGKKGKEEEEKRREREIPPDAPIIDPTIKFEHQ
PWYINATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSK
GPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAVIRENEFTFEDSTVKTGRKVF
RMKKDSAIKFHVLLTSYELITIDQTILGSINWACLVVDEAHRLKNNQSKFFRILNGYKIY
YKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML
RRLKADVFKNMPSKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDL
KKCCNHPYLFPVAAMEAPVLPNGSYDGNQLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQM
TKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL
ATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLT
HLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEMEAAARAMGSHQKLWDIKDGDEGSV
IHYDDNAISKLLDRSQNATEDTEIQNMNEYLSSFKVAQYVVKDEDAEEEPQREIIKQEEN
VDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDDLSDNHSEYSV
GSEDEDEDFEERPEGGRRHSRRQLKSDRDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAI
MRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLS
RQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPLGLELKKLTESLSSDPNTPVPASPA
ATPQPPGTPVPPEKMDSISGPTEDKETTELEYKKLPELETNLSTESSSQVEKTDKAADSD
ETVKGSTEDKPVSSEESNERTDTPSTLPEPSTNPKEPPSKQTELSSNQSSPKAEPCRETE
KSLDKGDSDPAPAKPEEKELKPVFSDEPKSEDMPVPEGRLNGEKEAQEETEDIRREVEKN
GFKMRFMFNIADGGFTELHTLWQNEERAAVSSGKMYDIWHRRHDYWLLAGIVTHGYARWQ
DIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQD
PNHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKGLSSPSVYTAAGLKHCLQ
TQDLVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGNEPPPQQP
FGQGSFACSQMYSTGFGGSFRGPAGGAMVNYSQMPLGPYVSVSNGPPPPSSHLDKKSCDP
LRDVTTPDLKSGKPSDVICIED
NT seq
6189 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtcgttaagcaatgaagacgagggacaagacgacatggattttgaagacgag
ataccagatgaggatgaggagggtgaacacaacactgtcccgctcacacctctggacagc
ttcttctctgacgatgactcccttaaacaactgaagaagaagaaacctaaaaagatgaag
gagggcaagatgcccaaagtcaagaagaggaaaaaggagggaggaggaggtggcggaata
ggagttggtggcaatgacccggaggagcaggtctcagagcgggaggatgaccatccactg
cgacgtccagagattggctcagagagcgagagcagtacctacgcccccgcccccaccaca
aagaagaagaagaagaaacccaaggagaagaaagagaagaaacccaaacggaagaagaga
gaagaggaggaggaggatgatgacgatgatgatggcgacgacgatgatgatgatgatgat
gatgaaaataataaggagcccaagtcatccagccagctgatgcaggagtggggtctggaa
gatgtgcagtatggcttcacagaggaggactatacaaccctcaccaactacaaggctttc
agccagttcctcaggccacttattgccaagaagaaccctaagatccccatgtcaaagatg
atgacagtgttagggtccaagtggcgcgagttcagcgctaacaaccccttcaaaggcacc
tccgcaaccgctgtggctgcagcggtggctgctgctgtggaaatggtcactgtggcctcg
cccatctctgttaaagaggtcactaccctaccaagctctcagcctgggccaatcagaaaa
gccaaaaccaaagatgggaaggggcctggggtaagacggaaaacaaagactgtaaaggag
gtaaagaagaaaagtaaagggaagaagaccaaatcaaagaagaaagcatcctcgagtgag
gaggactttgggctggaggagtcggactttgatgatgtcagcatccacagtgcctcggtg
cgctctgatacctcggggaatgccaagaagaaagcccggaagggtcggaaaaaaaggaaa
agagaggatggggacggctatgagacagaccaccaggactactgtgaggtgtgccagcag
ggaggggagatcatcctgtgtgacacctgtcccaaagcttaccacctggtgtgtctggac
cctgagctggagaaggcccccgagggcaagtggagctgcccccactgtgagaaggagggc
atccagtgggaggccaaagatgatgacgatgatgaggaggaggttgcggttgaggaagag
gatgaccacctggagttctgcagagtgtgtaaagatggaggggagctgctgtgctgtgac
acctgcccctcctcctatcatatccactgcctcaaccctcccctgcctgagatacccaat
ggggagtggctgtgcccacgctgcatgtgcccacctctgaaggggaaggtacagaggatt
ctccactggacttggggggatccccccttacccactgaggtgccccctggccctgatgga
gaggtggtggacccgctggtcaagccccccctgaagggccacccggagagggaactgttt
gtcaagtgggctggtctctcctactggcactgctcctgggtcagcgaactacagttagag
ctgtaccacgcggtgatgtaccgtaactaccagcggaagaacgacatggacgagccccct
ccttacgactacggctctggggaggaggagctgaacaatgagaagaggaagagtaaagac
ccgcagtacgctgccatggaggagagattctaccgctacggcatcaagccagagtggatg
gtcatccacaggatcctcaaccacagttatgataaggatggagatgtgcactacatgatc
aagtggagagacctgccctatgaccagtgcacctgggaggtagatgactttgacgtccct
gagtataaccacagcaaacactcctactgggaccacagggagcagatgattggtgatgac
cagcgccccttagtggtgagaaagggaaagaagggtaaagaggaggaggagaagaggagg
gagagagaaatcccccctgatgccccaattatagatcctaccatcaagtttgaacatcaa
ccctggtacatcaatgccactgggggcaccctgcatccataccagctggagggtctgaac
tggttacggttctcctgggcacagggcacagacactatcctggcagacgagatgggcctt
ggcaagactgtccagaccatcgtgttcctctactcactctacaaggagggtcactccaaa
gggccatacctggtcagtgctcccctgtccaccatcatcaactgggagagggagtttgag
atgtgggccccagacttctacgtggtcacttacactggggacaaagatagccgagcggtc
atcagggagaacgagttcacttttgaggacagtacagtcaagacaggccgcaaggtcttc
cgtatgaagaaagacagtgccatcaagttccatgtgttgctgacatcatatgagctgatt
accattgatcagaccattctgggctctattaactgggcctgtctagtggtggacgaggcc
cacagactgaagaacaaccagtcaaagtttttcagaatcctcaacggttataagatctac
tataagctgctactgactggtactcctctgcagaacaacctggaggagctgtttcacctg
ctcaacttcctcaccccagagagattcaataacctggagggctttctggaggagtttgca
gacatctccaaggaggaccagatcaagaagctgcatgacctgctgggcccacacatgctc
aggagactgaaggctgatgtcttcaagaacatgccttccaagacagagctcattgtacga
gtggagctcagccccatgcagaagaagtactacaagttcatcctgacacggaactttgag
gcgctcaactccaagggcgggggcaaccaggtgtcccttctcaacatcatgatggacctg
aagaagtgttgcaaccacccctacctgttccccgtggcagccatggaggcgccagtgtta
cccaatggctcttatgatgggaaccagctggtcaagtcctcaggcaaactcaccctgctc
cagaagatgctgaagaaactcaaagatgaaggacacagagttctcattttctcccagatg
actaagatgctggatctgcttgaggactttctggaatacgagggctacaaatatgaacgc
atcgatggaggcatcacaggggggctacgacaggaggctatcgaccgcttcaatgcaccg
ggtgcacagcagttctgcttcctgctctccacccgagctggaggcctgggcatcaacctg
gccacggcagacaccgtcatcatctacgactcagactggaaccctcacaacgatatccag
gcattcagcagggcccaccgtataggtcagaacaagaaagtgatgatctatcgcttcgtg
acacgggccagcgtggaggagcgcatcacccaggtggccaagaggaagatgatgttgacc
caccttgtggtgagacccggcctgggctccaagaccggctccatgtccaaacaggagctg
gacgacatcctcaaatttggcactgaggagctcttcaaggatgagatggaggcggcagct
cgggccatgggttcccaccagaaactgtgggacataaaggatggagatgagggtagtgtc
attcactatgatgacaatgccatctccaagctgctggaccgtagccagaatgctacggag
gacactgagatccagaacatgaacgaatacctcagctccttcaaggtggcccagtatgtt
gtcaaagacgaggacgcggaggaggagccccagcgggagatcattaagcaggaggagaat
gtggatccagactactgggagaagctgctgaggcaccactatgagcagcagcaggaggac
ctggcccgcaacctgggaaaaggcaaacgcatccgcaagcaggtcaactacaacgacacg
tctcaggaggaccaagagtggcaggatgatctttcagacaatcattccgagtactccgtg
gggtccgaggacgaggacgaagatttcgaggagaggccggaaggtgggcgcaggcactct
cgcagacagctgaagagtgacagggacaaacctctgccacccctgctggcacgtgtaggg
ggcaacatcgaggtgctggggttcaacacccgtcagcggaaggccttcctcaacgctatc
atgcgctggggcatgcctcctcaggacgccttcaactctcactggctggtcagagacctg
agagggaagagtgagaaagagttcagggcctatgtgtccctgttcatgagacatctttgt
gagccgggggcagacggggcggagacctttgcagacggtgtcccacgagaggggctgtcc
cgccaacatgtcctcaccaggatcggggttatgtctctggtcaggaaaaaggtccaggag
tttgagcatgtcaatggaaagtacagcactccagacctgatcccacttggactagagttg
aagaaactgactgagagtctgtcctctgaccccaacacccctgtccctgccagccctgca
gccacaccccagcctccaggcactcctgtcccaccagagaagatggactcaatctcaggg
cctactgaagacaaggagaccacagaactagagtacaagaagctaccagaactggagact
aatctaagtacagagtcatcttcccaggtagagaagacagacaaggctgctgacagtgat
gagacagtgaagggcagcacagaggacaaaccagtctcctcagaggagagtaatgaaagg
acagacacaccctccacacttccagagccatccaccaatcctaaagagcctccatccaaa
cagacagagctgtcgtccaatcaaagctcaccaaaagcggagccttgtagagagacagag
aagtctttagataaaggagacagtgatcctgccccagccaaacctgaggagaaggaactg
aagccagttttttcagacgagcccaagagcgaggacatgccagtgcccgagggccggctg
aatggtgagaaagaagcacaggaggagacggaggacatcaggagggaggtggagaagaac
ggcttcaaaatgaggttcatgttcaacattgccgacggaggtttcacagagctacacacc
ctgtggcagaacgaggagcgggccgctgtgtcatctgggaagatgtatgacatctggcac
cgtcgccacgactactggctgctggctggcatcgtaacacatggctatgcccgctggcag
gacattcagaacgacccacgttatgccatcctcaatgagcccttcaagactgagatgcac
aaggggaactacctggagatgaagaacaagttcctggctcgccgctttaagctgttggag
caggctctggtgatagaggagcagttaagaagggcagcgtacctgaatatgacccaggac
cccaaccacccggctatggccctgaatacccgctttgctgaggtggagtgtctggctgag
tcccaccagcacctgtccaaggagtctctggctgggaacaagccagccaacgctgtgctg
cacaaaggtctgtcatctcccagtgtgtacacagcagcaggactaaaacactgtctacaa
actcaagatctggtactgaaccagctggaggagctgctgagtgatatgaaggcagatgtg
acgcggcttcccaacatgttgtcccggatccccccggtgtctgcccgtctgcagatgtct
gagaggagcatcctcagccgcctcaccagccgtggcaacgaacctccgccccaacagccg
ttcggccagggctcatttgcctgttcccagatgtacagcactggttttgggggcagcttc
cgggggcctgcgggaggagccatggtcaactacagccagatgccgctgggaccctacgtc
agtgtgtccaacggccccccacccccgtccagccacctggacaagaagtcctgcgacccg
ctgagggacgtcaccacccctgacctcaagtcaggcaagcccagtgatgtcatctgtatt
gaagattag
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integrated database retrieval system
