Salmo salar (Atlantic salmon): 106566120
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Entry
106566120 CDS
T04363
Symbol
shmt2, GLYM
Name
(RefSeq) serine hydroxymethyltransferase 2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00260
Glycine, serine and threonine metabolism
sasa00630
Glyoxylate and dicarboxylate metabolism
sasa00670
One carbon pool by folate
sasa01100
Metabolic pathways
sasa01200
Carbon metabolism
sasa01230
Biosynthesis of amino acids
sasa01240
Biosynthesis of cofactors
sasa04981
Folate transport and metabolism
Module
sasa_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
106566120 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
106566120 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
106566120 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
106566120 (shmt2)
Enzymes [BR:
sasa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
106566120 (shmt2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
106566120
NCBI-ProteinID:
XP_013989447
UniProt:
A0A1S3LER1
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Position
ssa12:complement(82136982..82169862)
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AA seq
521 aa
AA seq
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MCLTTIFRSCRGISSQSCTLATRTFTAFLPLCLRAPVALSSVGARRGQHAATRSVEQEAP
WTGQDSLAQDDPEMWDLLRKEKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPG
RRYYGGAEVVDQIELLCQKRALETFDLDPALWGVNVQPYSGSPANFAAYTAVLNPHDRIM
GLDLPDGGHLTHGYMSDTKRISATSIYFESMPYKLNPATGLIDYDQLEMTARLFRPKLII
AGTSAYARLIDYARIKKLCTEVKAYLLADMAHISGLVAAKAVPSPFKYADMVTSTTHKSL
RGARAGLIFYRKGVRSVDKKGREIQYDLEDRVNFAVFPSLQGGPHNHAIAGVAVALKQAQ
TPMFREYIGQVMRNSKAMAEALLSKGYTLVSGGTENHLVLVDLRPKGIDGARAERVLELV
SITANKNTCPGDKSALAPGGLRLGAPALTSRQFKETDFVQVVEFMDEGFKIALDVKKKTG
KLADFKNFLLEDPETVARMAELRKRVEAFARPFPMPGFEDH
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgacaaccattttcaggtcttgccgaggaatttcaagtcaaagctgtactttg
gccactcggacattcactgctttcttgccattgtgcctgcgtgccccggtggccctgagc
agcgtgggggcgaggaggggccagcatgcggctacccgtagtgtggaacaggaggcccca
tggactgggcaggacagtctggcccaggacgacccagagatgtgggacttgctgcggaaa
gagaaggaccggcagtgtcggggactggagctcattgcctctgagaacttctgcagtcgg
gctgcgctggaggcccaaggatcctgcctcaataacaagtactcagagggctacccaggc
aggaggtactatggtggagctgaggtggtggaccagatagagttgttgtgccagaagaga
gccctggagacctttgacctggaccctgccctgtggggggtgaacgtccagccctactct
ggctctcccgccaacttcgctgcctacaccgccgtcctcaaccctcacgaccgcatcatg
ggcctggacctgcctgatggtggacatctgacccatggttacatgtctgacaccaagagg
atatctgctacctccatctattttgagtccatgccctacaagctcaatcctgccacaggg
ctcattgactatgaccagctggagatgactgcccgtctcttccggcccaagttgatcatt
gcaggcaccagcgcctacgctcgcctcattgactacgctcgcatcaagaagttgtgtacg
gaggtgaaagcctacctgctggctgacatggcccacatcagtggtctggtggctgccaag
gctgtcccctcgcccttcaagtatgctgacatggttacgtccacaacacacaagtccctc
cgaggagccagggctggtctgatcttctaccgtaagggtgtgcgttctgtggacaagaag
gggagggagatccaatatgacctggaggaccgggtcaacttcgctgtgttcccctctctg
caggggggaccccacaaccacgccatcgctggggtggccgtcgcactcaaacaggcccag
acaccgatgttcagagaatacattggccaggtgatgcgtaactccaaggccatggctgag
gccctactgagcaaagggtacacgctggtgtcaggggggacggagaaccatctggtgctg
gtggacctgaggcctaagggcatcgatggagccagagcagagagagttttggagctggtg
tccatcacagccaacaagaacacctgccctggggacaagagtgccctggcgcctgggggc
ctcaggctaggtgccccggcgctgacctccagacagttcaaggagacagactttgtccag
gtggtggagttcatggatgaaggctttaagatcgccctggacgtcaagaagaagactggg
aaacttgcagactttaagaacttcttgttggaggatccagagacagtcgcccgcatggca
gagctgaggaaacgagtggaggccttcgcacgtcccttccccatgcccggcttcgaggat
cactag
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