Salmo salar (Atlantic salmon): 106566140
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Entry
106566140 CDS
T04363
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106566140
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
106566140
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Homez
Motif
Other DBs
NCBI-GeneID:
106566140
NCBI-ProteinID:
XP_013989469
UniProt:
A0A1S3LG13
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Position
ssa01:130153748..130159633
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AA seq
706 aa
AA seq
DB search
MSYHPVDTIGSPFRRSMDSRTTYGRSTGTPSSGFRSQSWSRASPGSTMTSSYKRSVNMPV
ARAYSSTLLSSADSVDFNQTNGDYKRSNEKEQLQGLNDRFAGYIDKVHYLEQQNSQIEEE
IQTLRQKQVSQSQLGDLYDQELQELRSMLEQIHQDKAQIQLDTDHVEDDIQRIRDRFDEE
ARIRDETEGIIRALKKDMTDSDLVKSELEKKVQSLHDEIAFIRNNHEEEVSDLFAQVQAS
QVTMERKDIQKTDITEALREIRTQLEGHSNQNLQQVEDWFMCRYSKLTDAAEQNKDAIKS
ARDEIADYRRQLQSKTVELESVRGTRESLERQLNDIEDRHNSDLSSLQETIHQLDNELKG
TKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRHTVTSSKKSKYEPP
KLKVQHKFVEEIIEETRVEDEKDEMDQDLAEIAQELSAALETEATDEGEDEGEEGGEEAE
GEEGEGGEGESEEVVASTEAQVSSSTHAEEEEEDKEGGDVEEEGEKEEEDEKGEEGEGDK
EDDTEGGDEGEGEGELEETVLCSKAPESKSSPDKEKGSGGEEETGEGEEEGDDQDEDAGS
DKGSKDGDDKDEEDEKKGKDEKEDKTDEKAAVAKAEAPKTEAPKSEAPKVEVQKSEAPKP
SKPDSLKRLSSTEAVLYRGCPLQRLSSTEAVLYRGCPLQRLSSTDI
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccacccggtggacacgatagggagtccattcaggagaagtatggatagtagg
accacctacggccgctccactggcaccccctccagcgggttccgttctcagtcctggtcc
cgggcaagcccaggctccacgatgacctcctcctacaagaggagcgtcaatatgccggta
gcccgagcgtacagctccacactcctcagctccgccgacagcgttgatttcaatcaaacg
aacggagactacaagcgctccaacgagaaagagcagctccaggggctcaacgaccgcttc
gccggttacatcgacaaggtgcactacctggagcagcagaacagccaaatcgaagaggag
atccagacgctgcggcagaagcaggtgtcgcaatcccagctaggcgatttatacgaccag
gaactccaggagctgcgctccatgctggagcagattcaccaggataaagcgcagatccag
ctcgacacggaccacgtcgaggatgacatccagagaattagggaccgtttcgacgaggaa
gcccgcatcagggatgagacggaaggcatcatccgggcgttgaaaaaagatatgaccgac
tctgatttggtgaagtcagagttggagaagaaagttcagtcactgcatgacgagattgcc
tttatccgcaacaaccacgaggaagaggtgagcgacctgttcgcccaggtgcaggcgtcg
caggtgaccatggagaggaaagacatccagaagacggacatcaccgaggcgctccgggag
atccgcacccagctcgagggccactccaaccagaacctgcagcaggtggaggactggttc
atgtgccgctattccaagctcactgatgctgcggaacaaaacaaagatgcaatcaagtcc
gcccgtgatgagatagcagactaccgccgccagctccagtccaagaccgtggagttagag
tccgtccgtggaaccagggagtcactggagaggcagttgaatgacatcgaggaccgacac
aacagcgacctgtccagcctgcaggagaccatccaccagctggataatgagctcaagggc
acgaagtgggagatggcgcgtcatctgcgcgagtaccaggacctgctcaatgtcaagatg
gccctggacattgagatagctgcatacaggaaactcctagaaggtgaagagacccacttt
agcactttcccttaccgccacaccgttacctcctctaagaagtccaagtatgagcctccc
aaactgaaagtccagcataagtttgtcgaggagatcatcgaggagaccagggtagaggat
gagaaggatgagatggaccaagacctggctgagatcgcccaggagctttctgccgctctg
gagacagaggccacagatgaaggagaggatgagggagaagagggaggagaagaagcagag
ggagaagagggagaagggggagagggtgaatcagaagaggttgtagcctccactgaagcc
caagttagctccagcacacatgctgaggaggaagaggaggacaaagaaggtggtgatgta
gaggaagagggagaaaaagaagaagaggatgagaaaggagaagagggtgagggtgacaag
gaagatgatacagaaggtggtgatgagggagaaggagagggggaattagaggagacagtc
ctgtgctctaaagccccagaatcaaagtcctctcctgacaaagagaagggaagtggagga
gaagaggagacaggagagggagaagaggagggagatgatcaagatgaagatgcaggtagt
gacaaaggatccaaagatggagatgataaggatgaggaagatgagaagaaaggaaaggat
gagaaagaagacaaaacagatgagaaggcagctgtagccaaggcagaggctcccaaaaca
gaagcccccaagagtgaggccccaaaagttgaggtccagaaatctgaggccccaaagccc
tccaagccagactccctaaaaaggctgtcctctacagaggctgtcctctacagaggctgt
cctctacagaggctgtcctctacagaggctgtcctctacagaggctgtcctctacagagg
ctgtcctctacagatatttaa
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