Salmo salar (Atlantic salmon): 106566209
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Entry
106566209 CDS
T04363
Name
(RefSeq) poly(rC)-binding protein 3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106566209
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
106566209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
106566209
NCBI-ProteinID:
XP_013989556
UniProt:
A0A1S3LF31
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Position
ssa12:87281737..87340726
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AA seq
488 aa
AA seq
DB search
MRLPVSHSHINMNCEQDFEEGGMNVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARI
NISEGSCPERIITITGPTDCVFRAFTMITLKLEEDLSTLVANGTVTSKPPVTLRLVIPAS
QCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNSTERGVTISGTQDAVIQCVKLICTVIL
ESPPKGATIPYRPGPSPGTVMIAGNQVFETSDYGSHPLFHVAQGGLDLQQMYAVQNQYGI
PHSELAKLHQLSMQQQGLAAQMSQQQANSVMPAGMESNSQTTSQELLIPNDLIGSIIGRQ
GTKINEIRQASGAQIKIGSQLDSTSDRAVTITGTPISINLAQYLITSCLETAKSTAQSSS
MSTSADLTMAYTQPPSPASSSAAAAATLAAMGCPGMSHPHAAVPMMGNPYGALPLSSLLG
MQSMKSLQSMPYLALSNPAANAAAAQAQAQAQAQAQAQAQAQAQIYTAKISSANGIGKKP
ERQKFAPY
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctacctgtgtctcattcccacatcaacatgaactgtgagcaggactttgaagag
gggggcatgaacgtcaccctcacgctacggctcctcatgcacggaaaggaagtcggcagc
atcattggaaagaaaggagagacagtaaagagaatacgagaagagagcagcgctcgtatc
aacatctcagagggttcgtgtccagagaggatcatcaccataacaggacctacagactgt
gtcttcagagcattcactatgatcactctcaaactggaagaggacctttcaactctggta
gccaatggcacggtcaccagcaagcctcccgtcaccctacgattggtcattcctgccagc
caatgtggctctctcatcgggaagggcggctccaagatcaaggagatcagagagaccacc
ggggcacaagtacaggtagctggggaccttctgcccaactccaccgagagaggagtgacg
atatctggaacccaagacgccgtcatccagtgtgtcaaactcatatgcactgtcattctc
gagtcacctccgaagggagccactatcccgtatcgacccggcccctccccgggaacagtc
atgatcgccgggaaccaggtgtttgagacatctgactacgggtcacatcctctcttccat
gtggcccagggagggctggatttacaacaaatgtacgctgtacagaaccaatatggcatt
ccacattcagagttggccaagcttcaccagttgtcgatgcagcagcaaggcctggccgcc
cagatgagccagcagcaagccaactctgtcatgcctgcaggaatggagtccaattcccag
accacatcacaggaactgctcattcctaatgacctcatcggctccatcatcgggcgtcag
ggaaccaagatcaatgagatccgccaggcgtcaggggctcagataaagattggtagccag
ctggacagcaccagtgatagagccgtcaccatcacagggacccccatctctatcaacctg
gcccaatacctcatcacctcctgtttagagaccgccaaatccaccgcccagtcttcctcc
atgtcgacctctgctgacctcaccatggcctacacccaacccccctcccccgcctcctcc
tcagccgctgctgctgccaccctggctgccatgggctgccccggcatgtcccacccccac
gctgcagtccccatgatgggcaacccctacggggccctccccctctccagcctcctcgga
atgcaatccatgaaatccctccaatccatgccctacctggctttatccaaccctgccgcc
aatgcagccgccgcccaggcccaggcccaggcccaggctcaggctcaggctcaggcccag
gcccaggctcagatctatacggcgaagatttcttccgccaatgggatcgggaagaaacca
gagagacagaagtttgcgccgtactga
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