Salmo salar (Atlantic salmon): 106566251
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Entry
106566251 CDS
T04363
Name
(RefSeq) stabilin-1-like
KO
K19020
stabilin-1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106566251
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sasa00536
]
106566251
Glycosaminoglycan binding proteins [BR:
sasa00536
]
Hyaluronan
Cell surface receptors
106566251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
FXa_inhibition
cEGF
EGF_Teneurin
EGF
Motif
Other DBs
NCBI-GeneID:
106566251
NCBI-ProteinID:
XP_013989617
UniProt:
A0A1S3LF90
LinkDB
All DBs
Position
ssa12:90396536..90520109
Genome browser
AA seq
2208 aa
AA seq
DB search
MERLLELNKEGAHKGRLSRTILLFVRDCMLTMSQKGPFTAFVPLLILPLAGVTDESVCQR
YLVRGQYLYKSLDRTDVYTASGLQLRFKPNKQFILVKFPETLYTVIQQDIPAANGIIHII
DQTIMPRNILPDSPKDEQFADKTIGEILTKDGKYNRFLSLVDNCGTTLPLRGPGPLTVFV
PTNDAVDKFRDGRLIYMLFHAQNKLQELLKHHIYSQAALTVDQLAGMGMIQTMANQILLV
NITNDGQVLLGGKPLQVTNIMASNGVIHMIDGILVPPSIVPILPKRCDVTENKIIVGPCV
RCSYLYESHCPEGSIELQSHMKDCDYEVYPFNPTLNKGCAKYCNTTIERAECCSGFYGPE
CKTCTGGFQTPCYGKGTCFDGIHGNGSCRCEEGFKGVACHICSDPNKHGEKCDQDCRCLH
GVCDNRPGSKGACRGGSCLEGYSGDYCDKEAKACNSDGLSEHCHVHAFCIFTGSHTTCEC
MSGYEGDGHSCILVNPCLKADRGGCDFNAQCVYSGPANVSCVCNEGWTGDGLVCTEVDNC
LLETRGGCHKDADCKSLGPGQSECTCMRGYMGDGTVCDLINPCQKNNGGCHSLAKCEPVD
GENVICVCPEGYVGDGITCYGMMQEELEMNINLYGFYRLIQRTSQFDLSGNITALVPSRD
VVRNLTTSEQDFWFSRYRLPYLLKAHFLQGIFSIEDLDKKVNQRLPTLHLPTTWEVKTVG
GEVRIENATILTPNIPSINGYIHIINTVLFPPLSDIPPEPPGLMQFLNTTPTFSLFTQAA
LLYNLTEEIGVYDYTLLLPTDAAVRNYLSQTNATQLGEEVLKYHVILHEQLFPDHLRDGM
LKDTLLGKAYQIMFHLGKNNETLANDVLLDGSHSETRNGVILAVPQVLHVHKNRCIQDVI
LRVRGRCSACDEKPRCFLSYKPAIREYPQNMRSNCKYRKRVGSRRRSVAGCIIDCLKTTQ
DHSCCPGYFGHFCFKCPGELDNWCSRNGRCKDGNLGTGECLCNEGFHGTACETCEPGRYG
KDCKSECSCAHGKCLDGVTGNGRCVCYKGWRGVNCSKEIVSDACGGICDDNANCKETDGP
RCQCVAGFTGNGTVCTEVNLCATGNGGCAQIANCTKTLPGERTCTCPEGYTGDGVWCLEI
DGCLVNNGGCSRLAECIKTGPNRVACNCLFGFSGSGHFCYRFNPCQTDNGGCGKYARCRY
MGNGERNCSCIGGNIGDGFDCRGRTRTEIFRQSEAALYRRIMTVSDVRSLYGDGPFTTFI
PPANSNFSIEAWESQGRSSDLANYHMVSCETLMLSDLKTTSKAVAVSGHQLTFSLKDGSV
YINDDARIVSSDYVTADGVIHYIDKVLTPYDLKDQKTIPSKLNFTEAGELYGYIKFSKLV
QDANMLNLVESSIHQPLTMLWPSDAALSSLSEERQHWLYSLDHRDKLTAIIKAHIIRNIK
KMTLTSSTTYRTMHGSTFTFSCNKKVVGDIMVNDNMARILDRFMLFNGGVAYGIDQLLEP
PGLGAHCDGLEDRTIYSRCGSCLSPRLCPHGTEDTGKTEVCNFINPYSMLYPRRHNVMYD
HDFSLYPSMSRHHMGQRMGCKRMCKSQAWVMSCCKNHYGRDCQVCSGGLEAPCGDHGDCD
DGRLGSGRCRCHDGFRGIACELCELKRYGTNCTACNCTDQGQCEEGMEGDGSCSCTEGWT
GDRCHLKIEKKLVCSPECHSNAVCLPENICLCQSQYVGDGLNCTAPDMCAEYNGGCHEHA
ACLQTDLQVNCTCLSGYEGDGSVCSPINRCVAETNGGCSDFATCLFTGPNERQCECLDGY
VGNGLQCLEKLVPPVDRCLEENGGCDPQATCKDLHYHSNTAGVFPMRSSGGKYQLNYTDA
ELACQAEGASLATFSQMADAQQLGMHLCVAGWIQGKKVGYPTRFPSVKCGDNHVGIVLYK
DPVDPSSKYDAFCYRQSDVSCVCGSGYVGNGDFCNGDLASVVATNLNYSVFYNILLKYAS
ASTEGEVLLDFLSSSSSYATLFVPLNAGFSENETLSDRDVEYHISTNNSITFYEDLKHDG
VIPSRLGYNLSVAISPSNTTQQNQEPQTLKLVNQRLVLTWDIPAYNGIIHVIEGPLRAPP
LPVHHAQSSGHAHGGGTVATSILVTCLIVCVIAGLTYYVFKHKNDAFRFHYFKNEEEGDK
PALVSIPNPLYSGYRAFNQPFGINEQCEEAETTAAAEPAEQVPQLLDL
NT seq
6627 nt
NT seq
+upstream
nt +downstream
nt
atggaacggctattggagctgaacaaggagggggcacacaaggggaggctctctagaacc
atcttgctatttgtgagagactgtatgctgaccatgagccaaaagggacctttcaccgct
ttcgtccctctactcattttgcctctagcaggcgtgaccgacgagtctgtgtgtcaacgt
tacctggtgaggggtcagtacctgtataaaagcctggatagaaccgacgtctatactgca
agtggactacaactcaggttcaagcccaataagcaattcatattggtgaagtttcctgag
actctctacacagtcatccagcaggacatcccagcagccaatgggattatccatatcatc
gaccagacaatcatgcccaggaacatcctccctgacagcccaaaggacgagcagtttgct
gataagaccatcggtgagatcctgacaaaggatgggaaatacaaccgcttcctctcgctg
gtggacaactgtgggactactctgcctctgagaggtcctggtcccctcactgtgttcgtc
ccgaccaacgatgctgtggacaagttcagagacggcaggctgatatatatgctgttccat
gcccagaacaaacttcaagagctactgaaacaccatatctactcccaggctgcgttgacc
gtggaccagctggcagggatgggtatgattcagactatggccaatcagatccttctcgtc
aacatcaccaacgatggccaggtgctgctgggcgggaaacctcttcaggttacaaatatt
atggcgtccaatggtgtgatccatatgatcgatgggattctagtcccgccctcgatcgtc
cccatcctgccgaagagatgtgatgtcacagagaacaaaatcatcgtgggcccgtgtgtg
aggtgcagctatctctatgaatcccattgccccgagggaagcatagaactgcaaagtcac
atgaaggattgtgactatgaggtatatcctttcaaccccacgctcaataaaggttgtgct
aaatactgcaacactactattgagagagcagagtgctgcagtgggttctacggacctgag
tgtaaaacatgtacaggaggtttccagacaccctgttatggtaaaggcacttgttttgat
ggtatccacggtaacgggtcgtgtcgctgcgaagagggcttcaagggggtcgcctgtcat
atctgttccgaccccaacaaacacggagagaaatgtgaccaggactgccgctgtctccat
ggtgtttgcgataaccgcccaggcagtaagggtgcgtgtagagggggctcttgcctggag
ggttactctggagactactgtgataaggaggctaaggcctgtaactctgatggtctatct
gaacactgccatgtccacgccttctgcatcttcaccggcagccacaccacgtgtgagtgt
atgtcggggtatgaaggagatggacactcctgcatcctggtcaacccctgcctgaaggct
gacagaggaggctgtgactttaacgcccagtgtgtgtactcagggccagcaaacgtgtcg
tgtgtttgtaacgagggctggacaggagacggcctggtctgtactgaggtggacaactgt
ctcctggagaccagaggtggctgccataaggatgcagactgcaagtctctaggcccagga
cagagtgagtgtacctgtatgaggggttacatgggggatgggacagtctgtgatctcatc
aacccttgtcagaaaaacaacggaggatgccattctctggctaagtgtgagccagtggat
ggagaaaacgtcatctgtgtctgtccagaagggtacgtcggagacggaatcacatgctac
gggatgatgcaagaggaactggaaatgaatatcaatctgtatggtttttaccgcctgata
cagaggacgtcacagtttgacctgagcgggaacataacggctctggtgccttccagggac
gttgtccgcaatctaaccacctccgagcaggacttctggtttagccgctacaggctcccg
taccttctaaaagcccatttcctccaggggatattctccatagaggacctggacaagaag
gtcaaccagcggttacccactctacacttgcctactacatgggaggtcaaaactgttggt
ggggaagttaggatagagaatgcaaccatcctcacccccaacatcccttctatcaacgga
tacatccacatcattaatacggttctgttcccccccttgtcagacatcccaccagaaccc
ccaggcctgatgcagttcctcaacaccacccctaccttcagtctctttacacaggcagca
ctgctctacaacctgacagaggagatcggtgtctacgattatacactcctacttccaact
gacgccgccgtccgaaattacctgagccagactaacgctacacaactgggtgaagaggtg
ttgaaataccacgtcattcttcatgaacagctgttcccggatcatctgagggatgggatg
ctgaaggacacattacttgggaaggcctaccagatcatgttccacctgggcaagaacaat
gagactttggccaatgatgttctgctggatgggagccacagtgagacgagaaacggagtg
atcctggccgttccccaagtcttacatgtccataagaaccgatgcattcaagacgtgatc
ctgcgggtcagagggaggtgctcagcctgtgatgaaaaacccagatgtttccttagctac
aagccagccattagggagtaccctcagaacatgaggtctaactgcaagtacaggaagagg
gtaggatctaggaggaggtccgtggctggctgcattattgattgtttgaagacgacgcag
gaccactcgtgctgcccgggatactttggtcacttctgttttaaatgccctggggagctg
gacaactggtgctcaaggaacggaaggtgtaaggatgggaacctagggactggggagtgt
ctttgcaacgagggtttccatgggacagcctgtgagacctgcgaaccgggacgctacggc
aaggactgcaagtcagaatgcagctgtgctcatgggaagtgtctggatggagtgacagga
aacgggaggtgtgtctgctacaaaggctggagaggagtcaactgctccaaggagatcgtg
tctgacgcctgtggcggaatctgtgatgataatgcaaactgtaaggagacagacggtcct
agatgccagtgtgttgcaggcttcacaggcaacggaaccgtctgcacagaggtgaacctg
tgtgccactgggaacggaggctgcgctcagattgccaactgcaccaagactttacctggg
gagaggacctgcacctgtccagaaggatacactggagacggggtgtggtgtctagagata
gacggttgtttagtaaacaacggtggatgttccagattagcagagtgcatcaaaacagga
ccgaaccgggttgcctgtaactgtttatttggcttctctgggagtggacatttctgctac
cggttcaacccctgtcagactgacaacgggggctgtggaaagtacgccaggtgtcgttat
atgggcaacggagagaggaactgctcctgcattggaggaaacataggagatggctttgac
tgccgtggcagaacccgcacggagatatttcgccagtcagaagcggcgttgtaccgtcgc
ataatgacggtgtctgatgtgaggagtctgtacggggatgggcccttcactacattcata
cctcctgcaaacagcaacttctcaatagaggcatgggagtcacagggccgcagctcagac
ctggctaactaccacatggtgtcctgtgagactctgatgctctctgacctcaagaccacc
tcaaaggctgtggccgtctccggacaccagctcaccttcagcctcaaggatggctctgtg
tacattaatgatgatgctaggatagtctccagtgattatgtgacagctgatggtgtgatc
cactacattgacaaggtcctcaccccatatgacctgaaggatcaaaagaccataccatcc
aagcttaacttcactgaagcaggtgaactatatggatacatcaagttcagcaaactggtg
caggatgccaacatgctgaacctggtagagagctccatccaccagcccctgaccatgttg
tggccatctgacgctgctctcagctctctgtccgaagagagacaacactggctctacagt
cttgatcacagggacaaactcacagccatcatcaaagctcacattatacgcaatatcaag
aagatgaccttgacgtcgtccactacctaccggacgatgcacggatcaaccttcaccttt
agctgtaacaagaaagtcgttggggacatcatggtgaatgacaacatggcgaggatcctg
gaccgtttcatgctgtttaacgggggcgtcgcgtatggcatcgaccagctactggaacct
cccggtctgggtgcacactgtgatggactggaggacaggactatatacagtcgatgtgga
agctgcttgagtccccgcctctgtccccatggaactgaagatacgggcaagactgaggtc
tgcaacttcatcaacccctactctatgctctaccctcgacgccacaatgtgatgtatgac
catgacttcagcctctacccctctatgtcgaggcaccacatgggccagaggatgggctgt
aaaaggatgtgtaagagtcaagcctgggtcatgagctgctgtaagaaccactatggaaga
gattgccaagtgtgttctggtgggttggaggcaccctgtggagatcacggggattgtgat
gatggccggctgggttctggacggtgccggtgccacgatggcttcagaggaatagcctgt
gagctgtgtgaactcaaacgctatggaaccaattgtacagcgtgtaactgcacagatcag
ggccagtgtgaggaggggatggagggagatgggagctgttcctgtaccgagggctggact
ggagaccgctgccacctcaaaatagagaagaagctggtgtgttctccagaatgccatagc
aacgctgtgtgtctgcccgaaaacatctgtctctgtcagtcacagtatgtgggggacggc
ttgaactgcactgctcctgatatgtgtgcggagtacaacgggggctgccacgagcacgca
gcctgtctccagacagacctgcaggtcaactgtacatgtctgtctggctacgagggtgac
ggctctgtctgctcacctatcaacaggtgcgtcgcagagaccaacggaggatgcagtgac
ttcgctacctgcctgttcacagggcctaatgagcgtcagtgcgagtgtcttgatgggtac
gtggggaacgggctacagtgtctggagaagttggtcccacccgtcgatcgctgtctagag
gagaacggaggatgtgacccccaggccacgtgcaaggacctgcactaccacagtaacact
gctggagtgttccccatgcgttccagtggagggaagtaccagctgaactacacagatgct
gagctagcctgtcaagccgagggggcttcgctcgccaccttctctcagatggctgatgca
caacagctgggaatgcacctatgtgttgctggatggatacaagggaagaaagtgggctat
ccaaccaggtttccatcggtcaagtgtggtgacaaccatgttggtatagtgctatacaaa
gaccctgtggaccccagcagcaaatacgacgccttctgttacagacagtcagatgtgtcc
tgtgtgtgtggaagtgggtacgtaggaaacggggacttctgtaacggagacttggccagt
gttgtggctaccaacttaaactactctgtattctacaatatattgctgaagtatgcaagc
gcgtctacagagggagaagttctgttggactttctgtccagcagttcatcctatgccact
ctgtttgtgccactcaacgctgggttctctgagaatgagacgttatcagaccgagatgtg
gaataccatatttccactaacaacagcatcacgttctacgaggacctgaaacacgatgga
gtaatcccatccagactgggatataacctctcagtggccatttctcccagcaacaccaca
cagcagaaccaggagccccagacgttaaagctagtgaaccagaggctagtgttgacctgg
gacatcccagcatacaatggaattatccatgtcatagagggcccactcagagccccgcca
ctaccggtgcaccatgcccagtcatcaggccacgcccacgggggcgggactgtggccacc
tccatcctggtcacctgtctgatagtctgcgtcatcgctggcctcacctattacgtcttc
aaacacaagaacgacgccttccgcttccattactttaagaatgaagaggagggggataag
cctgctctggtgtctattcccaacccgctctacagcggttacagggccttcaaccaaccc
tttggtatcaatgaacaatgtgaagaagctgaaacaacagcagcagcagaaccagcagaa
caagttcctcaactactggatttatga
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integrated database retrieval system