Salmo salar (Atlantic salmon): 106566444
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Entry
106566444 CDS
T04363
Name
(RefSeq) perforin-1-like
KO
K07818
perforin 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106566444
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Gene cluster
GFIT
Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
106566444
NCBI-ProteinID:
XP_013989963
UniProt:
A0A1S3LHF2
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Position
ssa13:complement(7557564..7560506)
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AA seq
524 aa
AA seq
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MTASVVLSPLSHLVFLGLLALYRLDGVFTCRLGTPEECANCSFVPGYKLAGMGYDIVTLR
QKRASVFDVNSYLANSCMVCVNPLMGGELQKLPLHMKDWRAESDCKKKTLSSYYYSVSSL
VDDIAFFIENDWKAGLKLENVDLQLAGSKSKVHGFASSHSNADKSSFSFQQFTCSVYSFS
VPSKPPLSLDFQRRIASLPYHYTSNSEAYKDIIDTYGTHYISDGDLGGMMKRVTAIRTCL
AALNKVFVSDVETCLSMGLDLDIPVGLPVDLGLNLLGGQCSKVATNSDSATGYSMGFLSH
HTEVNGGKTLNGVASMRNANIDSFLKWMKSLNELPEMVSFSLQPLYQLVDDNQTRADLQT
AISQYVIDKGIKRKKTENQACRDSPNLSADCCPLLAGRGKLTVFVDRGFSLRGDGMAEPE
GYVKLWCSGQHRQTRWITTYDPLWHTHFNFDYVNTQSSLELQVWDKDPGERDDDLQGGCS
VNLEQGSHGHSCELSNGSFTFSYTLTCDKHLTGDKCDQYYPSPN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgtcagtcgtcctctctcccctgtctcacctggtgttcctgggtctcctggct
ctgtatcgtttggatggagtgttcacctgtcgtctggggaccccagaagaatgtgccaat
tgttcctttgtgcctggctacaaactggctgggatgggctatgatattgtaacactgaga
caaaaacgggcctctgtatttgatgtcaatagttacttggctaactcatgcatggtatgt
gtgaacccacttatgggaggtgagcttcagaaactccccttgcatatgaaggactggagg
gccgaaagtgactgcaagaagaagactctgagttcctactattactccgtcagctctctt
gtggatgacatagccttctttatagagaatgactggaaggccgggctcaaactggagaat
gtagacctgcagttagcaggcagcaagtccaaggtgcacggctttgcatcctcacactca
aacgcagacaagtcttccttctcatttcaacagtttacctgctctgtctacagtttcagt
gtgcccagtaaacccccacttagcctggatttccagcggcgcatagcttctctgccatac
cattacacatccaacagtgaggcgtacaaggacatcattgatacctacggaacccactac
atcagcgatggagaccttggagggatgatgaagagggtgactgccattcgcacctgtcta
gcagccctaaacaaggtctttgtgtccgacgtggaaacatgtctgagtatggggttggac
ctggacatacctgtaggactgcccgtagacttagggctaaatcttttgggtggacagtgt
tcaaaggtcgctaccaactctgacagtgcaacagggtatagcatgggcttcttaagccac
cacacagaagtgaacggtgggaaaaccttaaatggagttgcttccatgagaaacgctaat
atagatagtttcttaaaatggatgaaaagcctaaatgagcttccggaaatggtatccttc
tccctgcagcctctttatcaactggtggatgacaaccagacgagagctgatctacaaaca
gcaattagtcagtatgtgatcgacaaagggattaagagaaaaaagacagagaatcaggca
tgcagggattcacctaacctctctgctgattgctgccctctgttggcagggagaggcaaa
ctaacagtctttgtggaccgtgggtttagtctgaggggtgatgggatggccgaaccggag
ggttacgtcaaactgtggtgttcaggtcagcacaggcagacccgctggatcactacctat
gatccactttggcatacacatttcaactttgactatgtaaacacccagtcctctctagag
ctccaggtgtgggataaggacccaggggaacgtgacgatgacctccagggtgggtgttct
gtaaacctggagcaggggagccacgggcatagctgtgaactcagtaatgggagtttcaca
ttctcttacacattaacttgtgacaaacacctgactggtgataaatgtgaccaatactac
ccctccccaaactag
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