Salmo salar (Atlantic salmon): 106566460
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Entry
106566460 CDS
T04363
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19-like
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106566460
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106566460
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106566460
Peptidases and inhibitors [BR:
sasa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106566460
Ubiquitin system [BR:
sasa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106566460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
USP7_C2
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
106566460
NCBI-ProteinID:
XP_013989990
UniProt:
A0A1S3LGN1
LinkDB
All DBs
Position
ssa13:8418768..8453118
Genome browser
AA seq
1513 aa
AA seq
DB search
MASSSESGRRNGGQRSADDSTSKKKQKDRANQESREAKRAAAGANAEHKKDVFVDWKQNA
NEVIARLRCGDGVQRVEDVTTTFTDTYCQARFPDGRQWDCHLHEEIEGSCSKVQYKEKSG
FLLLVMHKKIPFHSWPSLMQNKKEKQPVKVEAKNGKDQKQLPLVKPVVKPEKSVPKTADM
AELSAQTSAPPAQCEQRRGKAERGVKRIMNYKPADKPESGVKAGGEGQTKPVSVSKGDLP
QEPSAKRTVHPPKDPTSEMPRDTHSKSTSNGKPHSPTGRDLQTSTAGDNRAELLGNGHEG
TTPEVAISHTQQELKVQMEDNKAPESDFKAGAEEVIIPAATVSSAQISPKAGASTNRTER
PGEAERTDSEMLVRQPPNEADQATETLTPTIQSGSGKPVTATATKQAEPPNSSSTQEEKR
DRSKEEPLEMKQEEAVPEPMVNLKLLKNDSYEKGTDLMVVNVYMKGIFRETARVIFREQD
FTLIFQTSDANFLRLHADCGANTVFKWQVKLRNLIQPEQSTYAFTPSRLDITLKKRHSQR
WGGLEAPATQGAVGGAKVAVPSAPSSQASQPGSSKHSLPAKEEPPWVGEGKPKPPRTVDG
CLDSVSSRTVSDHVPIKQEPAVTPKPTCMVQPMTHAPPAGSQRSVEEEEEEEEKVCLPGF
TGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRAFENEINCNNPLGTGGRLAIGFAVLLRA
LWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETV
DSDGRLDEVGEIKVVADEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLY
LPVPLPQKQKVLTVFYFAKEPHKKPMKFLVSVSKENSSTAEVLESISRSVRIKAENLRLA
EVVKSRFHRIFLPSNSLDTVSSSDMLFCFEVLSKELAKERVVVLRVQQRPQVPSIPISKC
AACLKPPLSDEEKLKRCTRCYRVGYCNQVCQKKHWSSHKVLCGPNIENVGLPFLVSVPES
RLTYARLSQLLEGYSRYSVNVFQPPFQSGRTSPEVTQCLADLPPPAETPEGVGSGEKARG
GGGGAGDSEQEDSSLVPESPLETAQASAHPAGDPDALSTHTTDSGFIEPSSGSQDSQGEK
ETSCEKAVRPEGKAAVTGYQQPSESASSHTSQFYITILHSNSKEQTLEEKEEAVLDLPED
SSLELVWKNNERLKEYVLVRSKELEFEEDPGSVNETARAGHFTLEQCLNLFTRPEVLAPE
EAWYCPKCQQHREASKQLLLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPIRNLDLSK
FCIGQKDDMQQPPIYDLYAVINHYGGMIGGHYTAYARLPSAQNSQRSDVGWRLFDDSTVT
MVEESQVVTRYAYVLFYRRRNSPVERPPRLLGPLGAESPTAAGATASQASLIWQELEQEE
EGVEEGPRGLFRPRLGRRRAARREEGVEGQVWRLLRQRIPHYSDDDCVRYFVLGTLAALL
ALLVNLLYRANWG
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcagtgagtcaggccggcggaatgggggtcagcgcagcgcagatgacagc
accagcaagaagaagcagaaggacagggccaaccaggagagcagggaggccaagcgagca
gcagcaggggccaacgcagagcacaagaaagatgtgtttgtggactggaagcagaatgct
aatgaggtgatcgcgaggctgcgctgtggagacggggtgcagagggtggaggacgtcacc
actaccttcaccgacacatactgtcaggcccgcttcccagatgggcgccagtgggactgt
catctgcatgaggagattgagggctcctgcagcaaagtgcagtacaaagagaagagtggc
ttcctcctgctggtcatgcacaagaagatccccttccactcctggccttcccttatgcaa
aataaaaaggagaagcagcctgtgaaagtggaggccaagaacggtaaagaccagaaacag
ctgcctctggtaaagcctgtggtaaagcctgagaagtctgtcccgaagacggcagacatg
gccgaactgtccgcccagacgtctgctccaccggcacagtgtgaacagaggcgtggcaaa
gcagagcgaggtgtcaaacgcatcatgaactacaaaccagccgacaagccagagtctggg
gtgaaggctggaggagaggggcagaccaagccggtcagtgtcagtaaaggggacctgcct
caggagcccagtgccaagcgcactgtccatccccccaaggaccccacctcagagatgccc
agggatacacactccaagtccacatccaatgggaaaccacacagccccactggccgggac
ctccagacatctacagctggtgacaatcgagctgagctgctaggcaatggccatgagggt
acaacacctgaggtagccatcagccacacgcagcaggagttgaaagttcagatggaggac
aataaggccccagagtctgattttaaggctggtgcagaagaggtaatcataccggcagcc
actgtgtccagtgctcagatcagccccaaggctggagcctccaccaacagaacagagagg
ccaggggaggctgagaggactgactctgagatgctagtgagacagcctccgaatgaggct
gaccaggccactgagactctaacaccaaccatacagtcaggatcagggaagcctgtgact
gcaacagccaccaagcaggctgagccccccaacagcagcagcacacaggaggagaagaga
gacaggtctaaggaggaacctctggagatgaagcaggaggaagcagttccagagccaatg
gtgaacctgaagttgttgaagaacgactcgtacgagaaagggacagacctgatggttgtc
aacgtgtacatgaagggtatcttcagagagacagccagggtgatcttcagggaacaggac
ttcacactcatcttccagaccagcgatgcaaatttcttgcgtcttcatgcggactgcgga
gcgaatactgtctttaagtggcaagtcaaactccggaacctcatccagcctgagcagtct
acgtatgccttcaccccgtcccgtttagacatcaccctgaagaagaggcacagccagcgc
tgggggggcctggaggcccctgcaacacaaggtgcagtgggtggcgccaaggttgctgtg
ccctccgcaccgtcctctcaggcaagtcagccgggcagcagcaagcactccctccctgcc
aaggaggagccaccctgggtgggggaggggaaacccaagccccctcggacagtggacgga
tgcctggacagtgtgtcatcccgcaccgtctcagaccatgtccccatcaaacaggagcct
gcagtcacgcccaagcccacctgtatggtccagcccatgacccacgcacctcctgccggc
agccagcgcagcgttgaggaggaagaggaggaggaggagaaggtgtgtctgccaggcttc
acaggcctggtcaacctgggcaacacatgctttatgaacagtgtcatccagtctctgtcc
aacacccgggaactcagggactactttcatgaccgggcgtttgagaatgagatcaactgt
aataacccgttggggacgggtggtcggctggccatcgggttcgctgtgctgctccgggct
ttgtggaagggtacccaccatgcgtttcagccctctaagttaaaggcgatcgtggccagt
aaggccagtcagtttacaggctatgcccagcacgatgcccaggagttcatggccttcctc
ctggatgggctccacgaggacctgaaccgcatccagaacaagccctacacagagaccgtg
gactcagacggacggctggacgaggtgggtgaaataaaggtggtggcagatgaggcgtgg
cagaggcacaagatgagaaacgactcgttcatcgtagacctcttccagggccagtacaaa
tccaagctcgtctgcccagtgtgctccaaggtttccataacctttgacccattcctctac
cttcccgtgcccctgccccagaagcagaaggtcctcaccgtgttctactttgctaaagag
cctcacaagaaacccatgaagttcctggtgagtgtgagtaaagagaactcgagcacagcc
gaggtcctggagtccatctctcggagtgtgaggatcaaggcagagaacctgagactggct
gaggtagtgaagagtcgcttccatcggatctttctcccatccaactccctggacacggtc
tcctcctcagacatgctcttctgcttcgaagtgctgtctaaagagctggccaaggagagg
gtggtggtgctccgagtccagcagaggcctcaggtccccagtattcccatctctaagtgt
gctgcctgcctgaagcctcctctctcggatgaagagaaactgaagcgatgtacccgctgc
taccgcgtgggttactgcaaccaggtttgccagaaaaaacattggtccagccacaaggtt
ctgtgtgggcccaacatagagaacgtggggcttcccttcctggtcagcgtccctgagtcc
agactcacctacgcccggctgtcccagctgctggaaggatattcaaggtattcagtgaac
gtgttccagcctcccttccagtctggcaggacgtccccagaggtcacccagtgcctggct
gaccttccccctccagcagagacccctgaaggtgtggggtcaggggaaaaggccaggggg
ggtgggggtggggcaggggactcagagcaggaggactcctctctggttcctgagtctcca
ctagagacagcccaggcctcagcacatccagccggagacccagacgccctctccacccac
accacagactcaggtttcattgagccctcctctggctcccaggactcccagggagagaag
gagacgtcctgtgagaaggctgtcagaccagaaggtaaagctgctgtgaccggctaccag
caaccatcagagtctgcgtccagccacacctctcagttctacatcaccatcctccactcc
aacagcaaggagcagacactggaggaaaaggaagaggccgttctggacctccctgaggac
tccagcctggagctggtgtggaagaacaacgagcgtctcaaggagtatgtcctggttcgg
tccaaggagctggaatttgaggaggaccctgggtcggtcaacgagacggccagggctgga
cacttcaccctggagcagtgcctcaacctcttcactaggcctgaggtgctggcaccagag
gaggcatggtactgtccaaagtgccagcagcacagagaggcctccaagcagctgctgcta
tggcgtctgcccaacgtcctcatcatccagctcaaacgcttctccttccgcagcttcatc
tggagggacaagatcaacgacatggtcgacttccccatcaggaacctggacctcagtaag
ttctgtattggtcagaaggacgacatgcagcagccgcctatctatgacctctatgcagtc
atcaatcactacgggggcatgatcggaggtcactacactgcctacgcacgcctgcccagc
gcccagaacagccagcgcagtgatgttggctggcgtctttttgatgacagtacggtgacg
atggtggaggagagccaggtggtgacacgctatgcctacgtgctgttctaccgccgtcgc
aactcccctgtggaacgaccacctcgcttactggggcccctgggggccgagtcccccacc
gctgcaggagccaccgccagccaggcatctctgatatggcaggaactggagcaggaagag
gagggtgttgaagagggcccccggggcctgttccgtcccaggctggggaggagaagagca
gccaggagggaggagggggtggaggggcaggtgtggcggctgctgcgccaaaggatcccg
cattattccgatgacgactgtgtccgatattttgtcctgggtaccttggctgctctacta
gcgttgttagtgaacctactctacagagccaactggggctaa
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integrated database retrieval system
