Salmo salar (Atlantic salmon): 106566645
Help
Entry
106566645 CDS
T04363
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106566645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
Motif
Other DBs
NCBI-GeneID:
106566645
NCBI-ProteinID:
XP_013990341
UniProt:
A0A1S3LHB8
LinkDB
All DBs
Position
ssa13:17177478..17369639
Genome browser
AA seq
1649 aa
AA seq
DB search
MSKVIQKKNHWITKVTECAVNRDARGELNVELRGGAENGEFPYIGEVREDVLVYKNGQLS
EGELLLEIEGLSVSGLPLYDVLIVMNRCKGPVRLKTVRQGNKLNKDLKHYLSLRFQKSSP
DHGLQQTIRANLYHHAVPCTTRAPRDGEVPGVDYNFLSVEDFLSLEQSGTLLEIGTYEGN
YYGTPKPPRQPVVGTVILSDAVLLDGPPGSQQSTPKRTKSYNDMQNAQVVPADYEDDDQA
TEMNNSFTGSLVRSLFPSPLLCTGNPSDQDESCGAVLRPYPARENAPSYGLNNVAASTSD
SGQQTHAQPQASPEDPLGPLPGNWEMAYTENGEVYFIDHNTKTTSWIDPRCLEKPLKPLE
ECEDDEEGVHTEEPDNELELPAGWEKIDDPVYGVYYVDHINRKTQYENPIVEAKRRMQLE
QPQPPEGERYIREWIEEHSSAGAPLAVYASNHLETYRDPQVPPPLPPPPGGTKRGKPFFT
RNPAELNGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAAVDGKMETGDVIV
SVNDIIVLGYTHAQVVKIFQSIPIGSMVDLALCRGYPLPFDPDDPNTSLVTSVAILDKEP
IIVNGQQSYDSPSSHGSQTGGPVNGTREPRALSPSAEVASNGSHGYSSSDVVTLASSIAG
QPELITVHMEKGDKGFGFTIADSLTGGGQRVKQIVDYPRCRGLKESDILMEVNKRNVQNM
THNQVVDLLSKCPRGSEVTMLVQRGVVPAKRSPKLVQQLERKDSQSSSQHSVCSHRSTHT
DSPSHPSSNMPSEAVGPPPAAPTQLLPGLPPLPTQDPGDGTMTLQKKPDPFKIWAQSRSM
YESRQPDCQEQEIFLWRKDTGFGFRILGGNEAGEPIYIGHIVKYGAADEDGRLRSGDELI
CVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKSSGYGVGKGEGDVPPSPASSHHSST
QAPSLTEGKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGSGSAVVPAALQPYDMEIQRGE
NEGFGFVIVSSVSRPDAGTTLAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILSVNGC
SITNKSHSDIVNLIKEAGNTVSLRIIPGDESSNASLLTNAEKIATITTTHTPQTATEPRN
NSKLKQAPPPPPPTQALPSQDAEFYSVDLERDSKGFGFSLRGGREYNMDLYVLRLAEDGA
AVRNGKMRVGDEILEINSESTKNMKHARAIELIKNGGRRARLVLKRGDGSVPEYDASHDG
HSPTPGAQNSPQVRTLPPNSRYHTSSESSYPPDLHKPSRHEDAGQGRDRDRMEHSGRHFN
HHHHHTWNNNHTTSRQHSPDNSTSGGNNKKSLGRKFKKSDSESGISKLLKTLRKDSSGKK
AAAAAAEKERERSASSSTLDQRYGRPRRGSLDRSPTRKRNTSPDRRRAKSMDRRAERAHR
DCTPEREYDDGGFLSHAATPERPLFDRRLLREPQTPGRAYMEATTPERPNNGASSLSRSR
GRTTDMKATTPEGPNNGASSLSLSRGRTPDRGSLKNGNLLRDSSAETRDESYGINGTPER
LYRSERDSSPNSSSSREELNYAAAPAPRLKNYYSTLKNNSSAHHNTGYNNAGLSNKAGQH
HNNAVGRAPNQFPEPKRRFYKESPKDLSI
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtaattcagaagaaaaaccactggatcaccaaagttaccgagtgcgctgtg
aatcgggatgctcgcggggagctgaatgtggagctgcgcggcggcgcggagaatggagag
tttccatacatcggcgaagttagagaggatgttttggtttataaaaacggacaactgtct
gagggggagttactgctggaaattgagggtttgtcggtgtctggattgccactctatgac
gtcttgattgtgatgaatcgttgcaagggtcccgtcaggttgaaaactgtccgacaaggt
aacaagctgaacaaggacttgaagcactacctgagcctgaggtttcagaagtcctccccc
gaccatggtctccaacagaccatcagagctaacctctaccaccatgctgtgccttgtacg
acacgcgcccctcgagacggggaagtccccggggttgattacaacttcctgtccgtggaa
gacttcctgagccttgagcagagtggaacactactggaaataggaacgtatgaaggtaac
tattatgggacgcctaagccgccgaggcagcccgtggttgggacagtgattctcagtgat
gctgtgctcctcgacggcccaccaggctcccagcagtccactcccaagcgcaccaagtcc
tacaatgacatgcaaaacgcccaagtagtacctgctgactacgaggatgacgaccaggcc
acagaaatgaacaacagttttacaggatcattagttcgtagtctcttcccctctcccttg
ttgtgcacaggtaaccctagcgaccaggacgagagctgcggcgctgttctacggccgtac
cccgcgcgtgagaacgctccgtcctatggtctgaacaacgtggctgcctccacctcggac
agcgggcagcagacacacgcccagccccaggcctccccagaagaccccctaggacccctg
ccaggcaactgggagatggcctacaccgagaacggagaagtctacttcatagaccacaac
acaaagaccacatcgtggatcgaccctcgctgtctggagaaacctctaaaacctctggaa
gagtgtgaggatgatgaagaaggggtacatactgaggaaccggacaatgagctagagctg
cctgctggatgggagaagatagatgacccagtgtatggggtttactacgtagatcacatc
aacaggaagacccagtatgagaaccccatagtggaggctaaacgcaggatgcagctggag
cagccgcagcctcctgaaggtgagcggtacattcgagagtggatagaggaacactcctca
gctggtgctcccctggccgtctatgccagtaaccacctggagacataccgtgaccctcag
gtcccgcccccacttccccctcccccgggagggaccaaacgagggaagccgttcttcacg
cggaacccagcggagctgaacggaacctttatcaacaccaaactgaagaagagccgccgt
gggttcggctttaccgtcgtcgggggcgacgagccggatgagttcctccagatcaagagt
ctagtcctggacggtcctgctgctgtggatgggaagatggagacaggtgatgtcatagtg
agtgtgaatgacatcatcgtgctgggctacacccacgcccaggtggtgaagatcttccag
tccatccccatcggctccatggtggacctggccctgtgtcgcggctaccccctgcccttt
gaccccgacgaccccaacaccagcctggtgacctccgtggccatcctggacaaggagccc
atcatcgtcaatggccagcagagctacgactccccgtccagccacggcagccagaccgga
ggccccgttaacgggacgagggagccacgggccctcagcccctcggcggaggtggcgtcc
aacggctcacacggctactcctccagcgacgtggtcaccctggcgtcgtccatcgccggg
cagcccgagctgatcactgtgcacatggagaagggcgataagggctttgggttcacaatc
gctgacagcttgacaggtgggggtcagagggtgaagcagattgtggactacccccgctgc
aggggcctgaaggagtcagacattctgatggaggtgaacaagaggaacgtccagaacatg
actcacaaccaggtggtggacctgctcagcaagtgtcccagaggcagcgaggtcaccatg
ctggtgcagagaggagtggtgccggccaagaggagccccaagctagtgcagcagctggag
aggaaggacagtcagagcagctcccagcacagtgtgtgcagccatcgcagcacccacaca
gactctcccagccacccctcctccaacatgcccagtgaggccgtaggcccccctccggcc
gcccccacccagctgctgcctggcctgcctcccctgcccacccaggaccctggagatggt
accatgaccctccagaagaagccagaccccttcaagatctgggcccagtccaggagcatg
tatgagagcagacagccagattgccaggagcaggagatcttcctgtggcggaaggataca
ggttttgggttccgcatcctgggaggaaatgaggccggagagccgatctacattgggcac
atagtgaagtatggagcagcagatgaggacgggcgtctgcgttcgggggacgagctcatc
tgtgtggacggcacggccgtggtgggcaagtctcaccagctggtggtgcagctgatgcag
caggccgccaaacagggccacgtcaacctcactgtccggcgcaagagctcaggatacgga
gtgggtaaaggggagggtgacgtgcccccgtccccggcctcgtcgcaccacagcagcacc
caggccccctccctgacagagggcaagcggaccccccagggcagccagaactccctcaac
acagtcagctccggcagtggctccaccagtgggatcggcagtgggggaggagggggctcc
ggcagtgctgtggtccccgcagccctgcagccatatgacatggagatccaacgcggagag
aatgagggcttcggattcgtcattgtgtcgtcggtctccaggcctgatgctgggactact
ttggctggaaatgcatgtgtggccatgccccacaaaatagggcgcatcatcgaggggagc
cctgcggaccgctgtgggaaactgaaggttggcgaccgcatcctgtccgtcaacggctgc
tccatcaccaataagtcccactcggacatcgtcaacctgatcaaggaggcagggaacacc
gtctctctgaggatcataccgggtgacgagtcctccaacgcgtctctgttgaccaatgct
gagaagattgccaccatcaccaccacgcacacaccccaaactgccacagagcctcggaat
aactcaaagttgaaacaggctcctcctccacctcctccaacacaggctctgccctcacag
gatgcagagttctactctgtggatctggagcgggacagtaaaggctttgggttcagcctg
agaggaggacgggagtataacatggacctttatgtgttgaggctggctgaggatggggcg
gctgtcaggaatggcaagatgagggtgggagatgagatcctggagatcaacagcgagagc
acaaagaacatgaagcatgcacgcgccatcgagctgatcaagaatggtggccggagggcg
cgcctggtcctcaagaggggcgatggatctgttcctgaatatgacgccagccatgacggg
cactctcccacacccggggcacaaaactctccgcaagtgagaaccctgccaccaaacagc
cgatatcacacctcatcggagtccagttatccaccagaccttcacaaaccatcacgccat
gaggatgctggacagggccgagacagggacaggatggagcactcgggccggcactttaac
caccaccaccatcacacctggaacaacaaccacaccacctccagacaacactccccggac
aacagcaccagcggcgggaacaacaagaagagtcttggccgcaaattcaagaagtctgac
tcggagagcggcatctcgaaactcttaaagactctgcgcaaggacagctctgggaagaag
gctgcagctgcagcggcggagaaagaacgagaacgctccgctagtagcagtactctggac
cagaggtatggtcgaccgcgccgcggctctctcgaccgctcgcccacccgtaaacgcaac
acttcccctgaccgacggcgggccaagtccatggaccgcagggcagagcgagcacaccgg
gactgcacacctgagagggagtatgacgacggagggtttctcagtcatgcagccactcct
gaacgaccactctttgaccgtaggctcctgagggaaccccagaccccaggcagagcctac
atggaggccaccaccccagaacgccccaacaacggggcttcctccctgtctcgctccagg
ggccgcacgactgacatgaaggccaccaccccagaaggccccaacaatggggcctcttcc
ctgtctctctccaggggccgtacgcccgacagaggcagcctgaagaacggcaacctcctg
agggactcgtcggccgagacgagggatgagagctacgggataaacggaacaccagagaga
ctctacaggtcagagagagactcatctccaaacagcagctccagcagggaggagctgaac
tacgctgcagcgcctgctcccagactgaagaattactacagcacactgaagaacaactcc
tctgctcaccacaacaccggctacaacaatgcaggacttagcaacaaggcaggacaacac
cacaacaacgcagtaggccgtgccccgaaccagttcccagagcctaagagaaggttttac
aaagagagccccaaggacctcagcatctga
DBGET
integrated database retrieval system
