KEGG   Salmo salar (Atlantic salmon): 106566652
Entry
106566652         CDS       T04363                                 
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39-like
  KO
K13091  RNA-binding protein 23/39
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sasa03041]
    106566652 (RBM39)
Spliceosome [BR:sasa03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    106566652 (RBM39)
SSDB
Motif
Pfam: RRM_1 RBM39linker RRM_occluded RRM_5 RRM_7 RRM_8 CDC45
Other DBs
NCBI-GeneID: 106566652
NCBI-ProteinID: XP_013990363
UniProt: A0A1S3LHE5
LinkDB
Position
ssa13:complement(16884964..16894842)
AA seq 546 aa
MADDFDIEAMLEAPYRKDEIKSSSANGHEERSSKKKKRSHSRSSRSPSSGKRRSKSKDRK
KSRDRKRSKSREKKRSRSKERRRSGSHSRERAGRYRGRRSPFLGPKFNGGPGGKIGPPHA
NKLSRRRSRSRSPFKKDKSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVG
KVRDVRMISDRNSRRSKGIAYIEFLEANSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAA
MANNLQKGNAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETARSKGYGFIS
FADAECAKKALEQLNGFELAGRPMKVGNVTERTDSSTASSFLDNDELERTGIDLGTTGRL
QLMARLAEGTGLQIPPAAQQALQMSGSMHSSSIHFGNMAAGTDIQARLNPPPEAIANPAL
NLGPSMNQAMNLPTQPLATHCLQLSNMFSPQSENEPGWDIEIQDDVMEECNKHGGIVHIY
VDKNSPQGNVYVKCPTIPTAMAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTATQL
LMPSRR
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggcagacgattttgacattgaggctatgctagaggctccatacagaaaggatgagatc
aagtcctctagcgctaatggacatgaggagcgcagtagtaagaagaaaaagaggagccac
agtaggagtagtcggagcccgagctctggcaagcgcagaagcaagagcaaagacaggaag
aagagccgggaccggaagaggagcaagagtcgggagaagaaacgcagccgcagtaaggag
cgccgccgcagtggctcccatagcagggagcgtgccgggcgctacagaggacgccgcagc
ccctttttggggccgaaatttaacggtggtccaggagggaagattggcccaccacatgcc
aacaaactaagtcgtaggcgctcaagaagtcgtagtcccttcaagaaagacaagagtcca
gtaaggcaaccaattgacaacctgaccccagaggagagggatgcccgtactgtgttctgt
atgcagctggcagccagaatccgaccacgagatctggaggacttcttctctgctgtgggg
aaagtgagagatgtgaggatgatctctgacagaaactccaggaggtcaaagggtatcgcc
tacattgagtttctggaggcgaattcagtcccgctggccattggcttgactggacagaga
cttctaggagtgcccatcattgtccaggcctctcaggctgagaagaacagagcagcagca
atggccaacaaccttcagaagggtaatgctggccccatgcggctgtacgtgggctctctg
cacttcaacatcacagaggacatgctgcgaggcatcttcgagcctttcggaaggattgag
agcatacagctgatgatggacagtgaaactgcacgatccaaaggatatggtttcatctca
tttgcagatgcagagtgtgctaagaaagcactggagcagctgaatggctttgagctggcc
ggacggcccatgaaggttggtaacgtgacagaacgcaccgactcctccaccgccagctcc
ttcctggacaacgacgagctggagaggacgggcatcgacctgggcaccaccgggcgcctg
cagctcatggcccggctggcagagggtactggtcttcagatccctccagctgcacagcag
gctctacagatgagtggttccatgcactcgtcttcaatccacttcggcaacatggcagct
ggtacagacatacaagccaggctgaacccaccccctgaagctattgccaaccctgccctg
aacctgggtccaagcatgaaccaggccatgaacctcccaactcaaccactggctacacac
tgcctacagctgtccaacatgttcagcccacagtcggaaaatgagcctggttgggacatc
gagattcaggatgacgtcatggaggagtgcaacaaacatggtggaattgtccatatatac
gtcgacaaaaactcccctcagggcaacgtgtacgtaaaatgccccactatcccaacagcg
atggctgcagtgaatgccctacatggacggtggtttgcaggtaaaatgatcactgcagcg
tacgtacccctcccaacctaccataaccttttccctgattcagtaacggccacccagcta
ctgatgccttcgcggcgataa

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