Salmo salar (Atlantic salmon): 106566652
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Entry
106566652 CDS
T04363
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106566652 (RBM39)
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
General mRNP proteins
106566652 (RBM39)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
CDC45
Motif
Other DBs
NCBI-GeneID:
106566652
NCBI-ProteinID:
XP_013990363
UniProt:
A0A1S3LHE5
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Position
ssa13:complement(16884964..16894842)
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AA seq
546 aa
AA seq
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MADDFDIEAMLEAPYRKDEIKSSSANGHEERSSKKKKRSHSRSSRSPSSGKRRSKSKDRK
KSRDRKRSKSREKKRSRSKERRRSGSHSRERAGRYRGRRSPFLGPKFNGGPGGKIGPPHA
NKLSRRRSRSRSPFKKDKSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVG
KVRDVRMISDRNSRRSKGIAYIEFLEANSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAA
MANNLQKGNAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETARSKGYGFIS
FADAECAKKALEQLNGFELAGRPMKVGNVTERTDSSTASSFLDNDELERTGIDLGTTGRL
QLMARLAEGTGLQIPPAAQQALQMSGSMHSSSIHFGNMAAGTDIQARLNPPPEAIANPAL
NLGPSMNQAMNLPTQPLATHCLQLSNMFSPQSENEPGWDIEIQDDVMEECNKHGGIVHIY
VDKNSPQGNVYVKCPTIPTAMAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTATQL
LMPSRR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgattttgacattgaggctatgctagaggctccatacagaaaggatgagatc
aagtcctctagcgctaatggacatgaggagcgcagtagtaagaagaaaaagaggagccac
agtaggagtagtcggagcccgagctctggcaagcgcagaagcaagagcaaagacaggaag
aagagccgggaccggaagaggagcaagagtcgggagaagaaacgcagccgcagtaaggag
cgccgccgcagtggctcccatagcagggagcgtgccgggcgctacagaggacgccgcagc
ccctttttggggccgaaatttaacggtggtccaggagggaagattggcccaccacatgcc
aacaaactaagtcgtaggcgctcaagaagtcgtagtcccttcaagaaagacaagagtcca
gtaaggcaaccaattgacaacctgaccccagaggagagggatgcccgtactgtgttctgt
atgcagctggcagccagaatccgaccacgagatctggaggacttcttctctgctgtgggg
aaagtgagagatgtgaggatgatctctgacagaaactccaggaggtcaaagggtatcgcc
tacattgagtttctggaggcgaattcagtcccgctggccattggcttgactggacagaga
cttctaggagtgcccatcattgtccaggcctctcaggctgagaagaacagagcagcagca
atggccaacaaccttcagaagggtaatgctggccccatgcggctgtacgtgggctctctg
cacttcaacatcacagaggacatgctgcgaggcatcttcgagcctttcggaaggattgag
agcatacagctgatgatggacagtgaaactgcacgatccaaaggatatggtttcatctca
tttgcagatgcagagtgtgctaagaaagcactggagcagctgaatggctttgagctggcc
ggacggcccatgaaggttggtaacgtgacagaacgcaccgactcctccaccgccagctcc
ttcctggacaacgacgagctggagaggacgggcatcgacctgggcaccaccgggcgcctg
cagctcatggcccggctggcagagggtactggtcttcagatccctccagctgcacagcag
gctctacagatgagtggttccatgcactcgtcttcaatccacttcggcaacatggcagct
ggtacagacatacaagccaggctgaacccaccccctgaagctattgccaaccctgccctg
aacctgggtccaagcatgaaccaggccatgaacctcccaactcaaccactggctacacac
tgcctacagctgtccaacatgttcagcccacagtcggaaaatgagcctggttgggacatc
gagattcaggatgacgtcatggaggagtgcaacaaacatggtggaattgtccatatatac
gtcgacaaaaactcccctcagggcaacgtgtacgtaaaatgccccactatcccaacagcg
atggctgcagtgaatgccctacatggacggtggtttgcaggtaaaatgatcactgcagcg
tacgtacccctcccaacctaccataaccttttccctgattcagtaacggccacccagcta
ctgatgccttcgcggcgataa
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