Salmo salar (Atlantic salmon): 106566667
Help
Entry
106566667 CDS
T04363
Symbol
dcaf1, vprbp
Name
(RefSeq) DDB1 and CUL4 associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sasa01001
]
106566667 (dcaf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106566667 (dcaf1)
Enzymes [BR:
sasa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
106566667 (dcaf1)
Protein kinases [BR:
sasa01001
]
Serine/threonine kinases: Other
Other
106566667 (dcaf1)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106566667 (dcaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WDR55
WD40
LisH
Beta-prop_WDR19_1st
ANAPC4_WD40
WAPL
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
106566667
NCBI-ProteinID:
XP_013990386
UniProt:
A0A1S3LHG5
LinkDB
All DBs
Position
ssa13:complement(16441363..16465775)
Genome browser
AA seq
1569 aa
AA seq
DB search
MASASASVDSKAELTALLEHWLEKWEGEQQASTPDLVNILTKISELVERETEEYHKADPD
PFDDRHPGRADPECILGHLLKILFKDDDFMNALVNSYVMTSRELTLNTAACRLLQNIMPG
LETAVVFQEKEGIVERLFKWAQEAEQPLMIYATGLLAGAMENQDIAANYREENSVLVPLM
LQRLRELQARDTENRKEFKRPSPRKALGEPLLPLDEETVDGGFEDTPFSSGNNGMERVEK
GPEEDREANPFPPENNRTEKGPEEDIEENPYPSNESDNSSHKTSCCTSSSIKGLMKPVSA
PQSLSHRDFPDGRAEGSSHLKRRAERENGRKVKQKLNFSLPEPERNFSELSNSSWSEMSP
WVIGNNYHLYPLTPEMEQRLILQYLTPLGEYQELLAVFMQMGACELLIHYMDLKQTNDVQ
LTFEALKYLASLLLHKKFAAQFVAHGGVQKLLEIPKPSMAATGVSLCLYYLAYNQDAMER
VCMLPHSILSDVVSYTLWLLECSHASGCCHATMFFSISFAYRAVLELFDRQDGLRRLVNL
ISTLEILNPEDQAALLSDDQIFSSRQTAKHTCMALRRFFEAHLAIKVEQVKQSLQRTEGG
APIHPQPYYKACSYTHEQVVEMMEFLIEYGPVRLYWEPAEVFHKLSCVQLLLQLISIACD
WRTYYGRSDTVRYALDILSILTVIPKTQLLMAESVAVPDGEGGNAVSTVGMSVVLLVAEG
EVFVNDAEIQKSALQVVINCVCAPDKRMSSIGKFISGTPRRRLPQTTKSSESVLSKMWNV
VQSNNGIKVLLSLLTVKMPITDADQIRALACKALVGLSRSSSVRQIISKLPLFSSGHIQQ
LMKEPVLQDKRSEHVKFCKFAAELIKRVSGKPLMIGTDVSLAWLQRANVVAQSRISFPEK
ELLLLIRNHLVAKGLHDTATTLTKEADLPMAILPHPSSSALLPVVVPPPPASPAPALPRT
PRLANGVAARLASHGSHPSMPLSVQPRPSTSQLLALPPAAPPLLTPHQSNGSPLIGRIVF
TRERPSPCPVPASCKKPRVLRQKSDYGAFSQSPAMKKQLDRHLPSPPALDSIITEYLREQ
HARCKNPVTTCPPFSLFTPHQCPEPKQRRQAPTNFTSRNTRRVVYPKYGGVDGGCFDRHL
IFSRFRPMSVFREADEDESGFMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHS
SAITHLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGT
KEHIAHIYDIQTGQKTLTLNYPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSTRAIHKF
DKFNMNISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQA
DDDDDIMEMQTKTPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSV
NTDTVCRLYEVGRQRLAEEEEDEDDQEDDDQDDDDDDDDDSDDDMDTDPLIAELDNDNGE
DEEDEDGNNELSLSDDEVSRLLEGDGEEEEDDDDDDSDDDEEDGDLALDNTDSSDNSDLE
DDIILSLNE
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcatctgccagcgtggattccaaggcagagctgaccgctctgctggagcat
tggttggagaagtgggagggggagcagcaggctagcacaccagacctggtcaacatcctc
accaagatctcagagctggtggagagggagactgaggaatatcacaaagctgatcctgat
ccttttgatgacagacaccctgggagagctgatccagaatgcatcttgggtcacctgctt
aagatcctgttcaaagatgatgacttcatgaatgcgctggtgaatagctatgtgatgacc
agcagagagctcacccttaacacggcagcctgtcgcttgctgcagaacatcatgcctggg
ttggagactgctgtggtctttcaggagaaggagggcatagtggagaggctgtttaaatgg
gcccaggaggctgagcagcccctgatgatctatgctacgggcctgctggctggagccatg
gagaatcaggacatcgctgccaactacagggaggagaactcagtcctggtgcctctaatg
ctgcagcggctacgtgagctgcaggccagggacactgagaacaggaaggagtttaaacgg
cccagtcccaggaaggccctgggggaacctctccttcctctggatgaggagactgtcgac
ggaggcttcgaggacaccccgttctcctctgggaataacggcatggagagggtggagaag
ggaccagaggaggacagagaggcgaaccccttccccccggagaataacagaacagagaag
ggaccagaggaagacatagaggagaacccctaccccagcaatgagtctgacaactcttcc
cacaagaccagctgctgcaccagctcgtccatcaaaggcctgatgaaacctgtgtctgcc
ccgcagtctctgtcccaccgggacttcccagacggcagggcggagggcagcagtcacctc
aagaggagggcggagagggagaatggacggaaggtgaaacagaagctgaacttctccctg
ccggagccggagaggaacttcagcgagctgtccaacagcagctggtctgagatgagcccc
tgggtgatagggaacaactatcacctttaccctctgaccccggagatggagcagaggctc
atccttcagtacctcacccctctgggggagtaccaggagctgttggctgtcttcatgcag
atgggagcctgtgagctgctcatccattacatggacctgaagcagaccaacgatgtacag
ctcacctttgaggctctcaagtacctggcctccctgctcctacataagaagtttgcagcc
cagtttgtggcccatggaggagttcagaagcttctggagatccccaagccttccatggcc
gccacaggggtgtccctgtgcctctactacctggcctacaaccaggatgccatggagagg
gtgtgtatgctgccccactccatcctgtctgacgtggtgagctacactctgtggctgttg
gagtgttcccacgcctcgggctgctgccacgccaccatgttcttctccatctccttcgcc
taccgagccgtgctggagctcttcgacaggcaggacggcctccgacgcctcgtcaacctg
ataagtacgttggagatcttaaaccctgaagaccaggcggccctgctgagtgatgaccag
atcttctccagcaggcagacagccaagcacacctgcatggccctgcgcaggttcttcgag
gcccatctggccatcaaggtggagcaggtcaagcagtccctgcagcggactgaggggggc
gctcctattcaccctcagccctactacaaggcgtgcagctacacccatgagcaggtggtg
gagatgatggagttcctgatcgagtacggcccagtcagattgtactgggagccagctgag
gtcttccacaagctgtcctgtgttcagctgctgctgcaactcatctccattgcttgtgac
tggaggacctactatggcaggagtgacacagtgcgttatgccctggacatactgagcatc
ctgacggtgatccctaagacccagctgctgatggctgagtctgtggccgtgccagatggg
gaggggggtaatgcagtctccaccgtgggtatgagtgtagtcctgttggtggcggaggga
gaggtgtttgtgaacgacgccgagatccaaaagtctgctctgcaggtggtcattaactgt
gtgtgcgctccggacaaacgcatgtccagcatcggcaagttcatctcgggcactcctcgt
agacgcctgccccagaccaccaagagcagcgagagcgtgctcagcaagatgtggaacgtg
gtgcagtccaacaacggcatcaaggtgctgctgtccctgctgacggtaaagatgcccatc
acagatgcagatcaaatccgggccctggcctgtaaggccctggtgggtctgtcccgctcc
agctcagtcagacagattatcagcaagctgcctctcttcagcagcggacacatccagcag
ctcatgaaggagcctgtgctccaagacaaacgcagcgaacacgtcaagttctgcaagttt
gcggcagagctcatcaagcgagtgtctggtaaacccctcatgatagggacggatgtctcc
ctggcctggctgcagagggctaatgtggtagcccagtccaggatctccttccctgagaag
gagctactgctgttgatccggaaccacctggtggccaaaggcctgcatgacacggccacc
acgctcaccaaggaggccgacctccccatggccatcctcccccacccatcttcctcagct
ttgcttcctgtcgttgttccccctcctcctgcctctcccgcccctgccctcccccggacc
cctcggctggccaatggggttgcagcgcggttggcgagccacggctctcatccttccatg
ccgttgtcagttcagccccgtccctcgacatcgcaactcctcgcactccctccagccgcc
cctcccctgttgacccctcaccaaagcaacggctctcccctaattggtcggatcgtgttc
acgcgagagcgcccgtcgccgtgccccgtgcctgccagctgtaagaagccgcgggtgctg
aggcagaagtcagattacggtgccttcagccagagtccagccatgaagaagcagctggac
agacacctgccctctccccccgccctggacagcatcatcacagagtacctgagggagcag
cacgcgcgctgcaagaaccctgtcaccacctgcccccctttctccctcttcaccccccac
cagtgccccgaacccaagcagaggcgccaggccccaaccaactttacctcccgaaacaca
cgcagggtcgtctaccccaagtatggaggggtggacgggggctgcttcgacagacacctc
atctttagcaggtttcgtcccatgtctgtgttcagggaggcagatgaggatgagagtggg
ttcatgtgttgtgccttctctgcccgtgagcggttcctgatgctggggacgtgtacgggc
cagctcaaactctacaatgtgttcacaggccaggaggaggccagctacagctgccacagc
tctgccatcacgcacctagagccatcacgggatggttctctgttgttgacatctgcatca
tggagttatcctctgtctgcactgtggggcatgaagtcagtgttcatcatgaagcattcc
ttcttagatgaccattatgtggagttcagcaaactctcacaagaccgagttattggcaca
aaggaacacatagctcacatttatgacatccagacggggcagaagaccctgaccctcaac
tacccggacctggccaataactacaagaggaactgtgcgacctttaaccccactgacgac
ctggtgctgaacgacggcgtactgtgggacgtgcgctcgactcgtgccatccacaagttt
gacaagttcaacatgaacatcagtggagtgttccaccccaacggcctggaggtcatcgtc
aacactgagatttgggacctgcggacttttcacctcctccacacagtgccagctctggac
cagtgtaggatcgtcttcaacaacaacggcacggtcatctacggagcgatgctccaggca
gatgatgatgatgacattatggaaatgcagacgaagactccttttggctcctccttcagg
acgttcaacgccactgactacaaacccattgccaccattgacgtgaagaggaatatcttt
gacctctgcacagacactaaggactgctacctggctgtgattgagaaccaggactcggtc
aacacagacacggtgtgcagactgtacgaggtgggacgccagagactggctgaagaggag
gaggatgaagacgatcaggaggatgacgatcaagacgatgacgatgatgatgatgatgac
tctgatgatgacatggacacggaccctctgatcgctgagctggataacgataacggggag
gatgaggaagacgaagatgggaacaatgaattatctctctccgacgatgaggtgtctcgc
ctgctggagggcgatggagaggaggaggaggatgatgatgatgatgactcggatgacgat
gaggaagatggggaccttgccctggataacacagacagctctgacaactctgaccttgag
gatgacatcatcctgtccctgaatgagtga
DBGET
integrated database retrieval system
