Salmo salar (Atlantic salmon): 106566690
Help
Entry
106566690 CDS
T04363
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106566690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106566690
03036 Chromosome and associated proteins [BR:
sasa03036
]
106566690
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
106566690
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
106566690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
MSL3_chromo-like
DUF4882
Motif
Other DBs
NCBI-GeneID:
106566690
NCBI-ProteinID:
XP_013990449
LinkDB
All DBs
Position
ssa13:21960149..21976672
Genome browser
AA seq
830 aa
AA seq
DB search
MSAKVELDVSAKEADPNPPTDSSDALSSNDSLLKKTHPQTTTALILPAPVPSTQKVEVSP
GAAEADNGATAGEVENPTLAPQVGGTCSIVHVLEWKEGMAILPSSNLKFCVSDCGTLEMI
SQGKISSAEPAVMVSGKIPDSKNRPTNKTDMVSPLSSVGGVAVEQERPIKIEPKTQGGPG
QQESCDPMAQRTYPEQLRREPMTDKRGGGTDKIPGGRVASLDPELLKPMKKRKRKDYLSL
SEEESELDGMDYLKTESRHNKAGAVEVHIGLWTWGQYLEETKAVAAPAKLFQESQRVPQC
KSSFRQGMKLEGIDPQHPSMYFVLTVAEVCGYRLRLHFDGYSDCHDFWVNANCPDIHPAG
WCESTGHKLYTPKDKSCKEEEFSWASYLKMSKAQVAPKEVFASPGRTDTECGFEVGMKLE
AVDRMNPSLICVATVTDVVDDRFLVHFDNWDDTYDYWCDASSPYIHPIGWCQERSLPLTP
PQDYPDPGRFSWPRYLDETGSTAVSAEAFKVRPAHCFQAEMKLEVVDKRSPGLIRVATVE
EVDTHRIKIHFDGWSHMYDEWMDSDHPDTHPVGWCESTGHPLKIPPPESNKTQHLDPREP
ATTGQSSFSSMPCKVISHSRSTKYSFHHRKCPTPGCDGSGHVTGRFTAHHCLSGCPLAER
NQGRLKTDLSDTEGSGAKRNILIFGQRTKKSRYHGRIGRPPKYRKSQHRGYQTIATEGMC
PSLFMSALSAHPDRTLSLCWEQHCKLLPGVQGIHATQVAAWTVEEVFGFVQKLTGCEEQA
CVFKEEMIDGEAFLLLTQTDIVKIMNIKLGPALKISNAILMFKSIDEGLK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaaagtggagctggatgtttcagccaaagaagcagatcccaatcctcccact
gactccagtgatgccctctcctccaatgacagcctgttgaagaagacgcacccacagacc
accacagcactcatcctgccagcccctgttcccagtacacagaaggtggaggtctctccg
ggtgctgctgaggcagataatggagccacagctggagaggtggaaaaccccactctagcc
ccccaggttgggggaacctgtagcatcgtccatgtactggagtggaaagaagggatggcc
atcttacccagcagcaaccttaagttctgtgtgagtgactgtggaacactggagatgatc
agccaagggaaaatcagcagtgctgaaccagcagtaatggtgtctgggaaaatacctgac
tccaaaaacaggccaactaacaaaacagatatggtgtctcctctcagctctgtgggtggt
gtggctgtggaacaagagaggcccatcaagattgagcctaagacccagggagggccagga
caacaggagagctgtgatcctatggcacagagaacctacccagagcagctacgcagggag
cctatgactgacaagaggggaggaggcacagataagattcccgggggcagggtagcatct
ctggacccggagctgctgaaacccatgaagaagaggaagaggaaggactacctgagtctg
tcagaggaagaatctgagctggatggaatggattacttgaagacagaaagcagacacaac
aaagcaggtgctgttgaagtccatattggtctgtggacatggggacagtatctggaggag
accaaagcagtggcagctccggccaaactctttcaagagtctcagagagtcccgcagtgc
aaaagcagcttccgccagggcatgaagttagagggcatcgacccccagcacccctccatg
tactttgttctgactgtggctgaggtttgtggctacaggctgcgtctccattttgacggc
tactcagactgtcatgacttctgggtaaatgccaactgccccgacatccacccggcggga
tggtgtgagagcactggacacaaactctacacccccaaagataagagctgcaaagaggag
gagttctcctgggccagctacctgaaaatgagtaaagcacaagttgcccctaaagaggtg
tttgccagccctggaagaacggatacggagtgtggttttgaggtgggcatgaagctggag
gcagtcgaccgcatgaacccctctctcatttgcgtggcgaccgtgactgacgtggtggac
gaccgcttcctggttcactttgataactgggacgacacgtacgactactggtgtgatgcc
agcagtccatacatccatcctattggctggtgccaagagaggagcctccccctcacgccg
cctcaagattacccagacccaggcaggttctcctggccaaggtacctcgacgagactggc
tctaccgccgtgtctgctgaggcctttaaagtgcgtcctgcccattgcttccaggctgag
atgaagctggaggtggtggacaaaaggagccccggcctgatccgggtggccacagtggag
gaggtcgacacccaccgcattaagatccattttgatggctggagtcatatgtatgatgag
tggatggactcggaccaccctgacacccacccggtcggctggtgtgagagtacgggtcac
ccgctaaaaatcccaccccctgagtccaacaaaacccaacaccttgaccccagggaacct
gcaaccacaggccagtccagtttctcctccatgccttgcaaagtaatcagccactccaga
tccaccaagtacagcttccatcacaggaagtgtccgacgcctggatgtgatggctcgggt
catgtgactgggcggttcacagcgcatcactgtctgtcaggctgcccattggctgagcga
aaccagggcagactcaaaaccgacctatcagatacagaggggagcggagccaagcggaac
atcttaatctttggccaaaggaccaaaaagtcccggtaccatggcaggattggtcgtccc
ccaaagtatagaaaaagccagcatagaggttaccagacgatagccacagagggtatgtgc
ccgtctctgttcatgtctgccctgtcggcccacccggaccgaaccctgtctctgtgctgg
gagcaacactgcaaactgctgccgggcgtccagggcatccatgctacacaggtggcagca
tggaccgtggaagaggtctttggatttgtccagaaactgactggttgtgaagaacaagcc
tgtgtcttcaaagaggaaatgattgacggggaggccttcctattactgacacaaactgac
atcgtcaaaatcatgaacatcaaacttggtcccgccctcaagatctccaacgccatttta
atgttcaagagtattgacgaaggcctcaagtga
DBGET
integrated database retrieval system
