Salmo salar (Atlantic salmon): 106566735
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Entry
106566735 CDS
T04363
Symbol
cdh4
Name
(RefSeq) cadherin 4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106566735 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106566735 (cdh4)
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Major cadherins
106566735 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF5527
Motif
Other DBs
NCBI-GeneID:
106566735
NCBI-ProteinID:
XP_013990549
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All DBs
Position
ssa13:complement(19685376..20188866)
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AA seq
935 aa
AA seq
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MKTVSILMLTAALQLATFWGTNGKLASKAPCRPGFSQSFYSVLISRDVLQGRSILQADST
VSSPKVSFDDCMANEGVVFQSSDPRFSIGADGSIYTQREVTSLTAPVQFTVTASGPHVWE
TTVKLALMGQPTPSPPGNQVTEEEGKGGERKEEEEVKAPPEFQAPPTVIMFPRQQEISSK
GLRRQKRDWVIPPVNVPENSRGPFPQMLVSIRSDQDRNISIRYSITGVGADQPPNEVFSI
DPVAGKMFVTKPLDRERRSSYHLRAHAVNMNGERVESPIDLYIYVIDMNDNRPEFKNQVY
NGSVDEGSKPGTFVTHLAAFDHDDNTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVT
VAAGLDREKVSQYSIIVQATDMEGNLNFGLSNTATAIISVTDINDNPPELTSRTFSGEVP
ENRINVAVANLTVIDRDQPRSPNWNAVYRIISGDPIGHFTIITDPHTNDGMVTVVKPVDF
EQNRAFMLTVVVNNQAPLASGIQSSLQSTSGVTISVVDINEPPFFPTNPKSIRFEEGVPA
GTSLTTFSASDPDRFMQQSIRYSKLADPAEWLSINTTNGQIVTTATLDRESIYVKNNIYE
ATFLAVDNGSPMASGTGTLQIYLIDVNDNAPSLLPRESQICERINRNAGINITAADSDTD
PNVGPFVFELPTFPASIRRNWTVSRLNGDYARLSLRIQYLKPGVYEVPVIVSDSGNPPLS
NRSVIKVKVCPCDENGDCTLVGAVAAAGLGTGAIIAILICIIILLSMVLVFVVWMKRREK
ERQTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPLGVRRVDE
RPIIPESQYPIRPAVPHPGDIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVS
SLNSSSTGDQDYDYLNDWGPRFKKLADMYGGGEDD
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgtctccattctcatgctgacagcagccttacaactggccacgttttggggg
actaatggaaagctcgcgtccaaagccccctgcagacctggcttctcacaaagtttttac
tccgtgcttatttcaagggatgtactgcaaggccggagcatacttcaagcagattccacc
gtgtcatctccgaaagtgagttttgatgactgtatggcgaatgagggggtggtctttcag
agcagtgaccccaggttcagcattggtgctgacgggtccatctacacccagagagaggtg
accagcctgaccgcaccggtccagttcacggtcactgccagcggtccacacgtgtgggag
accacggtcaaactggccctgatggggcaacccactccctcaccgccaggcaatcaggtc
acagaggaagagggaaaaggaggggagaggaaggaggaagaggaggtcaaagcaccacca
gagttccaggctccacccactgtcatcatgtttcccaggcaacaggagataagctccaag
gggctgcggagacagaagagggactgggtgattccaccagtcaacgtgcctgaaaactcc
agggggcccttcccacaaatgcttgtcagtatccgttcggaccaggaccggaacatctcc
atccgatacagcatcacaggggtgggagccgaccagccacccaatgaggtgttcagtatc
gaccctgtcgccggcaagatgttcgtcaccaagccgctggacagagagaggagatcatca
taccatcttcgtgcccatgcagtgaacatgaatggtgagcgggtggagagccccatagac
ctgtacatctatgtcatagacatgaacgacaaccggcctgagttcaagaaccaggtctac
aacggctctgtcgacgagggctccaagccaggtacgtttgtgacgcacctggcagccttc
gatcatgatgacaacaccacggccaatgggatggtgcgctaccgaatcctttcccagacg
ccacacagccccatccccaacatgttcaccatcaacagcgagaccggagacattgtcacc
gtggcagcaggcctcgaccgcgagaaagtgtcccagtacagcatcatcgtccaggccacg
gacatggagggcaacctaaactttggcctgtccaacacggccaccgccatcatctctgtc
acagatatcaatgacaatccacccgagctcacctccagaactttttcgggggaggttcca
gagaaccggatcaatgttgcggttgccaacctgaccgtgattgaccgcgaccagccacgc
tcgcccaactggaacgctgtatacaggatcatcagtggtgaccccataggtcacttcacc
atcatcaccgacccacacaccaatgacggcatggttaccgtggtgaagccggtggacttt
gagcagaacagggccttcatgctgacggtggtggtcaataaccaggccccgctggccagt
gggatccagtcgtccctccagtccacatccggggtcaccatctctgtggtagacatcaac
gaaccgcccttcttccccaccaaccccaaatccatccgctttgaggagggtgttcctgct
ggcacctctctcaccaccttctcagccagcgaccctgaccgcttcatgcagcaaagcatc
aggtattctaagctggccgacccagctgagtggctgtccatcaacaccaccaacggtcag
atcgtcaccacggcaaccctggacagagagtccatctacgtcaaaaacaacatttacgaa
gccaccttcctcgcagttgataacggctctcccatggccagcggtacaggaaccctccag
atctatctgatagatgtgaatgacaacgctccatctctgctgccccgcgagtctcagatc
tgtgagcgcatcaaccgcaacgccggcatcaacatcacggctgcagactcagacacggac
cccaacgtaggaccctttgtattcgagctgcccaccttccccgccagcatacgacgcaac
tggactgtgtcacgtctcaacggtgactatgcccggttgagtttgcggatccagtatctg
aagcctggggtgtatgaggtgcctgtgattgtgagcgactcggggaaccctcctctctcc
aacaggtccgttataaaggtcaaggtgtgtccgtgtgatgagaacggagactgcaccctg
gtcggggctgtggctgccgctggactggggactggagccatcatagccatactcatctgt
atcatcatactgctcagtatggtgctagtgtttgtggtgtggatgaagcgtagagagaag
gagaggcagaccaaacagctgctgatcgacccagaggacgatgtcagagataacattctg
aaatacgacgaggaaggagggggagaggaggaccaggactatgacctaagccagctgcag
cagcctgactctctggagcacatcatcagtaagcccctgggggtacggagggtggacgag
cgccccatcatccctgagtcccagtatcccatccggcctgcggtcccccaccctggagat
atcggggacttcatcaacgagggtttgcgggcggcagacaacgaccccacggcccctcca
tatgactccctcctggtgtttgactacgagggcagtggctccacggctggctccgtcagc
tccctcaactcctccagcacaggggaccaggactacgactacctcaacgactggggcccc
cgctttaagaagctggccgatatgtatgggggaggggaagatgactag
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