Salmo salar (Atlantic salmon): 106566740
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Entry
106566740 CDS
T04363
Symbol
ss18l1
Name
(RefSeq) SS18L1, nBAF chromatin remodeling complex subunit
KO
K15623
protein SSXT
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106566740 (ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106566740 (ss18l1)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106566740 (ss18l1)
GBAF(ncBAF) complex
106566740 (ss18l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
106566740
NCBI-ProteinID:
XP_013990559
UniProt:
A0A1S3LJ65
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Position
ssa13:complement(19603090..19627159)
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AA seq
384 aa
AA seq
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MSVAFLSARPRSKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTANMGSMGPGGMGQNGGSGPIHSQSNLNDTMTPGLPPPSLM
QSQMSNVSMMQQQSATPHYPSSQTGAGQQHYQGQQTAMGMLGQSGQGNSMVSQRPMGTYR
PTQQGCALQYMGQDEFYGEQYGHTQSSSEPINQQYYPDGHGEYSYQQSSYGEQGYERPFD
ESSQHYYEGGNSQYSQQQAQYQHGSGQQQPFSQQQYPSQQGYSTQQQGYGPGQGASSQYS
QYQQGQGQAYSSYRSSQAAPGAQTQRPYAYEQVQLQLPPTPRFEEDGAVQPNIGVNMETT
SNKAPPPGQTGGQVRQGNSSVNAP
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcatttttatcggcgcgcccaaggagcaaaggggaggtgacacaacaaact
atacaaaagatgctggatgaaaatcaccatctgatacaatgtataatggattaccagagc
aaaggaaaaacagcagaatgcacacagtatcagcagatccttcacagaaacctggtctat
ctggccacgatagcagattctaatcagaacatgcagtcactgttacctgcgcctcctacc
gctaacatggggagtatgggtcctggagggatggggcagaacgggggcagtgggcccata
cactcccagagtaacctaaacgacaccatgacacctggcctgccccccccctccttgatg
cagagtcagatgagcaatgtttccatgatgcagcagcagtcggccacacctcattacccg
tcgtcccagactggggccgggcagcagcactaccagggccaacagactgctatgggcatg
ttggggcagagcggacaaggcaacagtatggtgagccagaggcccatggggacttaccga
cccacacagcaaggatgtgcactgcagtacatgggacaagacgagttctacggagagcag
tatggacacactcagagctccagtgagcccataaaccagcagtattaccctgatggtcat
ggcgagtactcctaccaacagtcgtcctacggcgaacagggctatgagaggccctttgac
gagtcctcacagcactactacgaaggaggcaactcccagtacagtcagcagcaagcccag
taccagcatggctcaggtcagcagcagcccttcagccagcaacagtacccctcacagcag
ggttacagcacacagcaacagggctatggtccaggtcagggtgcgtcgtcccagtactcc
cagtaccagcagggtcagggccaggcgtatagctcctaccgctcctcccaggctgcccct
ggggcacagacacagaggccctacgcttacgaacaggtacagctacagctacccccgacc
ccacgttttgaggaggacggtgctgtccaaccaaacattggggtcaatatggaaactacc
agcaataaggcaccacctcctgggcaaactggtggacaagttaggcaagggaacagttct
gtgaatgccccttaa
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