Salmo salar (Atlantic salmon): 106566812
Help
Entry
106566812 CDS
T04363
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106566812
03036 Chromosome and associated proteins [BR:
sasa03036
]
106566812
Membrane trafficking [BR:
sasa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106566812
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
106566812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
WD40_CDC20-Fz
IQ_SEC7_PH
Beta-prop_Vps41
CFAP43_N
DUF7675
DUF6059
Motif
Other DBs
NCBI-GeneID:
106566812
NCBI-ProteinID:
XP_013990705
UniProt:
A0A1S3LIP3
LinkDB
All DBs
Position
ssa13:complement(27124595..27155499)
Genome browser
AA seq
1365 aa
AA seq
DB search
MASLPPPIPQTSVPMSNRASKMEDDEEEEGMKFDFDNSDEECSTTPDNSVSAMAKGFEAT
VMVGLASKRNTMGPSSAQDPTVKPRLNGWPSAGKEDQSMHSLPHSNSSEMVGRRSPEGHS
ELGVSGDTEGSGRRNSIYEAGSMNECYYTPILKKAAHIDTQTGKPPPILNVGGPGDAASP
ENENVSRPEGLQGPDGLACTDSPPSPTSPDNVMTDPTHRHDMTNSTSPDDIIMTSSEAIF
RTSRPEVIYDDVPCESLLSPLEDDIYEDVQRPESHHGTNNGWSDSEFESYDEQSDSETKI
PTVARSSSKLSQDMWRLKERCAKTKQDLAMRSCDFKVQMLMKAARNGTKDGLEKTKLAMM
RKVSFLQKKETTEESDDDAGYLDVTVSDVKHPPPQLSPMPKGLTTQQIIRRHIIGSIVQS
ERSYVDSLKRILVEYQKPLLEPEARILSDKKVRPIFYRLREILQCHSMFQIALASRVAEW
DLSEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMALIKKACISKPAFLEFLKKKQVSSPD
RITLYGLMVKPIQRFPQFILLLQDMLKNTPRAHPDRLPLQLALTELETLAERLNEQKRVA
DQVAEIQQLARSIGDRQLSKLLNSDQRQLILCEVLIETVYGEKGQVLKSKERKVFLLNDT
LICANINVKGPPDISSLVPIGPKYTVKWSAPLLQTQVVEVGQESFQSKDTGKRPNVANVP
GKVFLGPPRLYQELEELQHDLSVVENITLLVGTLQGTYQNLNTTVGQDWCLALQRLIHIK
DEQIQCANKCRLRLAVPGKPDKSGRPVSFMVVFNTPSPLSKISWVNRLHLAKIAKREENM
PGWVFAEDDGKTRHPFWCPLLACRLPIFSSKTQDQKLETALHNPVQCALLAFSAASTSLP
QGYLWVASGGDRNHGQVEIFSLNRSTPRMVKSIQMGAPVLCLDHVMEPCPTEEEEGEAAV
KSTARTGNTICVGLQDGNIHVYGTVDTSTQCLLTFSNPDSCPVLCLKHSASFLFAGLGNG
KVSVYARKSGEGLWDPESCRLVTVGSGPIRTLLTLENVVWASCANHVTVIQGSSLHTQSF
DAHPEPAVSVSHMVRAGGGVWMAFSEGSSIRLFHTETLEHLQEINISTRSTFLSPGQQGN
VRVTSLLICQGLLWVGTAQGIIVTLPVPKLEGIPKITGKGMTSLNAHCGPVDFLVVTSST
LSPDMLKRDSVCETVDQANGGAGGGEGGEWRNELSQESLSQPDCSSPHGEPAKGMLLQYR
LRSTTQLPGKLLTAEPDQSPCDAPPETPEHSPEDGSIYELSEDPEVWVRGQPPAREGRGK
DKVTSAAVFSGGRGFRRLGEETIAANGDPDEITLMVWQLPLTVSP
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctacctccccccatccctcaaacctcagtgcctatgtccaacagggcctct
aagatggaggatgatgaggaagaggaaggtatgaagtttgactttgacaacagtgacgaa
gagtgcagtacgacaccagacaactctgtctctgccatggccaagggctttgaagccact
gtgatggtggggcttgcatcaaaaaggaacacaatgggccctagttctgcccaagaccca
acagtaaagccaaggctcaatggatggccatctgctggaaaggaggaccagagcatgcac
tcactccctcattccaatagctcagagatggtgggaagaaggtctcctgagggccactct
gagctgggagtgtcaggagacacagagggttctgggagaagaaatagcatttatgaagca
ggatctatgaatgagtgctactacacccctatcttaaaaaaggctgcccacatagacact
cagacagggaaacctccccctattcttaatgtaggaggtccaggtgatgcagcaagtcct
gaaaatgaaaatgtgtctcgtccggagggcctgcaaggtccagatggtctggcctgcaca
gacagcccacccagccccaccagtcctgataacgtcatgactgatccgacccaccgccat
gacatgaccaactcgaccagccctgatgacatcatcatgactagttcagaggcaatcttt
aggaccagtcgtccagaggtcatctatgatgacgtgccctgtgagagcctcctctctcct
ctggaagatgacatctacgaggacgtccagaggccagaaagccatcatggcaccaacaac
ggttggagcgacagtgagtttgagagctatgatgagcagtcagacagcgagaccaaaata
cccactgttgcccgaagcagtagtaagctttctcaggacatgtggcggctgaaagagcgc
tgtgccaagacaaagcaggatctggccatgcgcagctgtgacttcaaggtccagatgctg
atgaaagcagcgagaaatggcaccaaggacggactggaaaagacaaagttagctatgatg
cgtaaagtctctttcctgcagaaaaaagaaaccacggaggagagtgacgatgacgctggt
tatctggacgtgacggtgtctgacgtgaagcacccgccgccccagctgagccctatgcca
aaggggcttaccacccaacagattattagacgccacatcattggctccatcgtacaaagt
gagaggagttatgtggactctctcaagagaatcttagtggagtaccagaagcccttgctt
gagccagaggctcggatcctgagcgataagaaggtccggcccatattttaccgactgcgg
gagatcctgcagtgccactcaatgttccaaatcgccctggcatcccgtgtggccgagtgg
gacctcagtgagaagatcggagacctctttgtggcctcgttttccaagtcaatggtacta
gacgtgtacagcgactacgtcaacaacttcactaacgctatggcgctcatcaagaaagcc
tgcatttccaagccagctttcctggagtttctcaagaagaagcaagtgtcaagtcctgac
agaatcactctttatggccttatggttaaaccaatccagcgcttccctcagttcatcctg
ctgctacaggacatgctgaagaacactccccgggcccaccctgaccgcctgcccctgcag
ttggccctcaccgagctggagacgttggccgagaggctgaacgagcagaaacgagtcgct
gaccaggtcgctgaaatccagcagctggcacgcagcattggtgaccgtcaactgagcaag
ctcttgaactcagaccagaggcagctgatactgtgtgaggtactgattgagacagtgtat
ggggagaaaggacaggtccttaagtccaaggagcgcaaggttttcctgctgaacgacacc
ctcatctgtgcaaacatcaatgtcaagggtccccctgatatcagcagtctagttcccatt
ggtcctaaatacacagtgaagtggagtgcccccttgctgcagacgcaggtagtggaggtg
ggacaggagagcttccagagcaaagatacagggaaacggccaaacgttgctaatgttcca
ggtaaagtgttcctgggccctcccagactgtaccaggagctggaggagcttcaacacgac
ctgtctgtggttgaaaacatcaccctgctggtggggactttacaaggcacctaccagaac
ctgaacacaacagtagggcaggactggtgccttgcactgcagaggctcatccacatcaaa
gatgaacagatccagtgtgccaacaagtgccgcctgcggctggctgtgccaggcaagcct
gacaaatctggacgaccggtcagtttcatggtggttttcaacactcccagtcccctcagt
aagatctcctgggtcaaccgcctacacctcgccaagatagccaagagggaagagaacatg
ccaggctgggtgtttgcagaggatgatggcaagactagacatccattttggtgtcccctg
ctagcctgccgacttcccatcttctcctccaaaacacaagaccaaaagctggagacagcg
cttcacaacccggtccaatgtgccctgctggcattctctgcagccagcacctctctgcca
cagggctacctttgggtggccagtggaggtgaccgcaaccacggtcaagtggaaatcttc
tctctgaaccgctccacgccgcgcatggtcaagtccatccagatgggggcgccagtcctg
tgtctggaccacgtgatggagccttgtcccaccgaagaggaagagggggaggctgctgtc
aagagcacagccaggactggcaacaccatctgtgtaggcctgcaggatggcaacattcat
gtgtacggtaccgtggacacttcgacccagtgcctgctgaccttctccaacccagacagt
tgtccagttctgtgtctgaaacactctgcctccttcctgttcgctgggctggggaatgga
aaagtgtctgtttacgctcggaagagtggagaggggttgtgggaccctgagtcgtgcagg
ctggtgactgtgggcagtggccccatccgcaccctcctaaccctagagaatgttgtgtgg
gccagctgtgccaaccacgtcaccgtcatccagggctccagcctccacacacagagtttt
gacgcgcacccggagcccgccgtcagtgtgagtcacatggtgcgggcggggggaggggtg
tggatggccttctccgagggctcatccatccgcctgttccacacggagacactggagcac
ctgcaggagatcaacatctccacacgctccaccttcctcagcccagggcagcagggcaac
gtccgggtcaccagcctactcatctgccaggggctgctgtgggtgggcactgcccagggc
atcatcgtcaccctgcccgtgccgaaactggagggtatccccaaaataacaggtaaaggg
atgacgtctctaaacgctcactgtggccctgtggatttccttgtggtcacctccagcacc
ctgtccccagacatgctcaaacgggattctgtctgcgagactgtagaccaggccaatggg
ggagcgggaggaggagagggtggggagtggaggaatgaattgtcccaggagtcactctcg
caacctgactgctcctccccccacggagagcccgccaagggaatgctgcttcagtatcgc
ctccgctcaaccacccagctgcctggcaagctgctgacagccgaacccgaccagagccca
tgtgacgccccaccggagaccccggagcacagccctgaggacggctctatctacgagctg
agcgaggaccctgaggtatgggtgcgggggcagcccccggccagggaggggcgcgggaag
gacaaggtgacctctgctgccgtcttctccggaggcagggggttccgtcgacttggggag
gagactatagcagccaatggggacccagatgaaattacgctcatggtttggcaactccca
ctaacagtgagcccatga
DBGET
integrated database retrieval system
