Salmo salar (Atlantic salmon): 106566831
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Entry
106566831 CDS
T04363
Name
(RefSeq) TBC1 domain family member 25-like
KO
K24799
TBC1 domain family member 25
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106566831
Membrane trafficking [BR:
sasa04131
]
Others
Specific organelles associated proteins
Auto phagosome
106566831
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
UFL1_C
Motif
Other DBs
NCBI-GeneID:
106566831
NCBI-ProteinID:
XP_013990760
UniProt:
A0A1S3LIV3
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All DBs
Position
ssa13:complement(26401014..26409682)
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AA seq
910 aa
AA seq
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MATDEERGVVRVKVKKCEGLLPVEFRSFAVDPQITSLEVLQHILIRAFELNGKRNFGISY
LSRDRGGLEVYLSLLSDWDLDAAFVSAAKPYLQLKMDIKPAEDSPVMEDWDIISPKEVIC
SDQLPGDRRSLAAAALPFTQSLLSQVTDNALALHPVSHLFYQPVTAALSQMMGRTLSRVQ
QALSWSYGEEVKPFKPPLSDAEFHSYLNGQGQLSRPEELRLRIYHGGVEPSLRKVVWRYL
LNVYPDGLTGQERMDYMKRKTREYDQLKGEWSARVSPEDLEFIRGNVLKDVLRTDRAHPY
YAGSEDSPHLTALTDLLTTFAITHPQVSYCQGMSDIASPILAVMDNEAHAFICFCGIMKR
LEGNFRQDGQLMSVKFQHLKLLLQYSDPEFYCYLVSRGADDLFFCYRWLLLELKREFAFD
DALRMLEVTWSSLPPDPPETEVELFGPPLETDQTRMTSESGVEKRPAFAGEEEGEQKEKQ
RRRHMLRPSREEADGGRKIDMEEGEREDRGARREGEGNFDMPYVGKEKVHNNAPVPPFEK
QNSFGEFKYYNARNKDSFDFVERDPLERPVEMEASLHPVSNPPARQGTEDSEEDPGERAP
LITDDDKSSSPETEERSSPNGQTASPVSPFPHGLPSWKNGSSLSPGSTPSPSSWRGASPD
TPSPRYTSPILPNGRVESPEKATRGFASFASVPNGTGANSPATPTGRSLVSSPLLTRSLL
SSPILSFGRALPSLPVSTVNKSFPSNLPSPCSKASSTAPNTPNSTKPENTTIKPCSLPPP
QEFGKGNPFMLFLCLSILLEHRDHIIKNSFDYNELAMHFDRLVRRHNLGRVLQRAKALFA
DYLQSEVWDSEEGDEVSSDSPTTVTAAFHSPPPSATRPLFTPLSSSPNSTYNLADTIPSP
SSPVSLSPSS
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgatgaggagaggggcgtagtgcgtgtcaaagtcaagaagtgtgaggggctg
ctgccagtggagtttcgctcatttgctgtggatcctcagataacatcacttgaggtgcta
cagcacatcctcatccgagcctttgagttaaatggcaaacgcaactttggaataagttac
ctatcccgggaccgtggaggtttggaagtgtatctttcgctcctgtctgactgggattta
gatgctgcatttgtcagtgcagctaaaccttatctacagctcaagatggacattaagcct
gccgaagacagtcccgttatggaagactgggacataataagccccaaagaagtgatttgt
tctgaccagcttcccggggatagaaggtccttggcggctgcggccctccccttcacccag
tccctactgtcccaggttactgacaacgctctcgctcttcaccctgtcagccatcttttt
taccagccagtcactgctgccttgagtcagatgatgggtcgaacactgtccagagtacaa
caggccttgagctggtcttacggggaggaagtgaagcctttcaagccccctttgagcgat
gcagagttccacagttacctcaacggccagggccagctttcccgaccagaggaactgagg
ctacgcatctatcatggcggggtagagccttcactacgcaaggttgtgtggcgttacctc
ctgaacgtgtaccccgatgggctgaccggtcaggagaggatggactacatgaagagaaag
actagggagtacgaccagctgaagggggagtggtcagctagggtcagtccagaggacctg
gagttcatcaggggcaacgtactgaaggacgtcctgaggaccgaccgggcccatccctat
tacgccggctccgaggacagcccccatctcaccgctctcaccgacctgcttaccaccttt
gccattacacatccacaggtgtcgtactgccaaggcatgagtgacatcgcttctccgata
cttgccgtcatggacaatgaggcacatgcattcatctgtttctgtggcatcatgaaacgc
ctagagggaaatttccgccaggatggccaactcatgtccgtcaagttccagcatctgaag
ctgctactgcagtactcagaccccgagttctactgttatttggtgtcccgcggagctgat
gacctgttcttctgttaccgctggctgctcttggaactcaaacgggagtttgccttcgac
gatgctctgaggatgctggaggtcacctggagttccctgcctcctgatcctcccgaaacg
gaagtggagctttttgggccgcccctagagacagaccagaccagaatgacatctgagagt
ggtgttgaaaagaggcctgctttcgcaggtgaagaagaaggggagcagaaagagaagcag
cggagacgacacatgttgaggccttcaagagaggaggcagacggcgggagaaagatcgac
atggaggaaggagagcgggaggacagaggagccagaagagagggtgaggggaacttcgac
atgccttacgtaggaaaggagaaggtgcacaacaatgcgcctgttcctcccttcgagaag
cagaatagttttggtgagttcaaatactacaatgcacggaacaaggacagctttgatttc
gtggagagagacccactagagcgtcctgttgagatggaagcctccttgcaccctgtatca
aatccaccagcccggcagggcaccgaggacagcgaggaggatccaggggagagagcacct
cttataacggatgatgacaagtcctccagtccagagacggaggagaggagctcccctaat
ggacaaacagcctctccggtctccccatttcctcatggtctaccaagctggaagaatggt
tcctctctgtctccaggctccactccctccccctcaagttggagaggtgcctccccggac
accccatcaccaaggtacacctcccccattttacccaacggaagggttgagtcgccagag
aaagccacaagaggatttgcttcctttgcctcggtgccgaacggaaccggagctaactct
cccgctacccccacagggaggtccttggtttcctctcccctactgactagatcattgctc
tcctcccctattttgtccttcgggagagctcttccttcgctgccggtcagcacagtgaac
aagtcctttcccagtaacctcccttctccttgcagcaaagcctccagcactgcgcccaac
actccaaattcaaccaaaccagagaataccaccatcaaaccttgttccctgccaccgcct
caagagtttggcaaagggaatcctttcatgttgttcctgtgcctgtcaatcctgttggag
catcgagaccacattataaagaacagctttgattacaacgagctggccatgcactttgac
cgccttgttcggcgacacaatctgggcagggtgctgcagcgcgccaaggccttgtttgca
gactacctgcagagtgaggtgtgggattcggaggaaggagatgaggtcagctcggactca
cccaccacagtcactgctgctttccactccccgcccccctctgccaccaggcctcttttt
acccctttgtcatcctctccaaactccacctataacctggctgacactataccttcccct
tcttcacctgtctccctctctccctcctcttga
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