Salmo salar (Atlantic salmon): 106566842
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Entry
106566842 CDS
T04363
Name
(RefSeq) paired box protein Pax-8-like
KO
K09293
paired box protein 8
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106566842
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
106566842
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
HTH_Tnp_IS1
DUF6115
Motif
Other DBs
NCBI-GeneID:
106566842
NCBI-ProteinID:
XP_013990778
UniProt:
A0A1S3LIL5
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Position
ssa01:128961406..128974404
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AA seq
474 aa
AA seq
DB search
MWKTYTELSRPEAVKFLARSDLIGHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPC
DISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAW
EIRDRLLAEGVCDSDTVPSVSSINRIIRTKVQQPFNLPLDGKGLSPGHILIPSSAVTPPE
SPQSDSLGSTYSISGLLGIPQPSQEGKRSHDDSDQESCRHSVDSQGSGGVPRKQLRPEHF
PPQHLDCGFDHHHYPPDSFSSAAASKTEQTVYPLSLINGSLEDGKTSLSTSSAAIGRNLA
AHQGYTVVADPLQPLPLCLKQEMSPEVTSTSPSPNVVTNSAFLELQSLQAPVSISSSCSS
SNHFPHAFNSFSHHAPVYSQFSSQSLIAGRDMVSSTLPGYPPHIPSSGQTGYSTSAITGM
VAGADYSGQTYTHSPYTSYSEAWRFTNSSILGSPYYYSSASRTAPPSTAAYDHL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagacatacacagagctgtctagaccagaagctgtcaaatttctagctagatcc
gacttaattggtcatgggggtcttaatcaactaggcggaatgtttgtgaacggccgtccg
cttccggaggtgatccggcagcgcatcgtggacatggcccaccagggcgtgcgtccctgt
gacatctcccgccagctccgtgtcagccacggctgtgtcagcaagatcctgggacgctac
tacgagactggcagcatcaagccaggtgtgattgggggctccaagcccaaggtggccact
cctaaggtggttgataaaatagcagattacaaacgccagaaccccaccatgtttgcctgg
gagatcagagacaggctgctggcagagggggtgtgtgacagcgacacagtgcccagcgtc
agctccatcaacagaataattcgaaccaaggtgcagcagccattcaatctgcctctggat
ggcaaaggcctaagcccaggacacatactcatccccagttcagccgtcactccccctgag
tcaccccagtccgactccctgggctccacctactccatcagtggcctgttggggatacca
caacccagccaggagggcaagaggagccatgacgacagtgaccaggagagctgtagacac
agtgtggactctcagggcagcgggggcgttcctagaaagcaactgagaccagagcacttc
ccaccgcagcacctggactgtggcttcgaccaccaccactatcccccagactccttcagt
tctgctgcagctagcaagaccgagcagactgtgtaccctctctcgctcatcaatggcagt
ctagaagacgggaagaccagcctctcaacatcgagtgctgctattggtcggaatctggca
gcgcaccagggctacactgtggtggcagaccccctacagcccctcccactttgtctgaaa
caggaaatgtccccagaggtgaccagcacaagcccctctccaaatgtggtgaccaactca
gcttttctggagctgcaatcgctgcaagcccctgtgtctatcagtagcagctgcagcagc
tccaaccatttcccccatgccttcaactcattctcccatcatgcaccagtgtacagccag
ttcagcagccagtctctcatagcaggaagggacatggttagctccactctccccggctac
cctcctcacatcccctccagtggccagacaggctactcaacctccgccatcactggcatg
gtagcaggtgcagactactctggccagacctacactcactccccctacacctcctacagt
gaagcttggagattcaccaactccagcattttgggttcaccctattactatagctcggcc
tcccgcaccgctccaccatccactgcagcctacgaccatctctag
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