Salmo salar (Atlantic salmon): 106566845
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Entry
106566845 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sasa01001
]
106566845
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106566845
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106566845
Protein kinases [BR:
sasa01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
106566845
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106566845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
106566845
NCBI-ProteinID:
XP_013990785
UniProt:
A0A1S3LIX7
LinkDB
All DBs
Position
ssa13:26136752..26156701
Genome browser
AA seq
1325 aa
AA seq
DB search
MADNKGEEDMESSSKLDSEPQGEDSGDPELKDVNPPISIETNLKEGEDSQSQENVSQMPK
PANDVVSGGGDASSNSAGTGEEDSISSNVSPVGNTNGGTTELKNVNAVIVIESNSKEGED
SQSQENISQVPTPANVSEGGDASSNSAGAVEEGSTSSSPVGNTNGGTTESSAAGDTAGTS
PTLTTDMSPPPTVPPANPVIPINLMDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPLPE
RQVTVQVPGPNGQPDTHIVNVMRCVVCCQDCKQSDIIDNYFVKDTTEASKTSDEKSAQMC
TSCEDNADTIGFCAECGEWLCKTCIEAHQRVKITKDHKIRKKEDVSEESVGVSEQRPVFC
PIHKQEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGIIETHMVKLQEKKTY
VHYSHSQVTSRIKEVTDTHKKVEHDIKIAVFTLINEINKKGKYLLQQLESVTKERSMKLL
TQQTDIANLARQILHVLNFTHSAINSGSSTALLYSKRLIIYQLRKVLKAGLEPVPQANGA
VRFFCDPTFWAKNVVNLVGNLVIEKMPQAQHPPNIMVGPISPGHGHPGHGKSPGQINLAQ
LRQQHMQQQAFAQQKQQQQHQHQQHQQQQQQHQQQHQQQHQQQHQQQHQQQQQQQQQQQH
QQQQQHQQRIQEQMRIASQISQQHPRQAVPQMVQQQPPRLISMQAQQRGPMNGGPNMYPP
HHLRLPPGQGRMPSSSAQPRMPNGQQYSPMMQPQLQRQMTVDSEMSDHRFRLLHLTGHSN
PGHAGPFPVASLHNVSAANPTSPTSASMASAHAHRGPASPIVGAIDLIPSVTNPENLPCL
PNIPPIQLEDAGSSSLDALLSRYILASTYPQLGLGPPGNMNLSHGPSTHSPGSSGLSNSH
TPVRPSSTSSTGSRGSCGSAGRPGPASGPMEQQVRVKQEPGAEKECGFSGTTTSNVKTEQ
GKDGGRSACMMSSSESRRTPPLPVLGSVTSGSSVQDILKKVGEHVKTEPQDQEACSGANR
PGNAPITTSSTSTVASAALLTNGKGAASAALRSPRTAQGTNQSGAGGKEDDPNEDWCAVC
NNGGELLCCDRCPKVFHITCHIPTLKCSPSGEWMCTFCRSLASPEMEYQPDDEPRGEKDN
SEQGLSPEDQRRCERLLLYVFCHDLSEGFQEPVPPSIPNYYKIIKKPMDLTLVKQKLQLK
HVQHYQSPKDFVSDVRLVFSNCAKYNEMSRIIQVYDEEKQSNVQADSEVAEAGKAVSLYF
EERLLELYPDESFPEVPEEPEVPEVPEEPQAPAGEEADLTEDSEDEFVQPKRKRLKTDEK
PMHIK
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaagaggatatggagagctcttccaaattagattcagaacct
cagggagaggatagcggagacccagaattgaaagatgtgaatccgccgatttccatagag
acaaatttgaaagaaggagaggattcacaatcccaggagaatgtttcccagatgcctaaa
ccagctaacgacgtcgttagcggaggaggggacgctagcagcaacagcgcgggcacaggg
gaagaagacagcattagcagtaatgttagcccagttgggaacaccaatggcgggacaacc
gaattgaaaaatgtgaatgcggtgattgtcatagagtcgaactcgaaagaaggagaggat
tcacaatcccaggagaatatttcccaggtgcctacacccgctaacgttagcgaaggaggg
gacgctagcagcaacagcgcgggcgcagtggaagaaggcagcactagcagcagcccagtt
gggaacaccaatggggggacaaccgagtcctcggctgctggggatacagctggaacctca
ccaacactcacaaccgatatgtccccacctccaacagttccaccagccaaccccgtcatc
ccaataaaccttatggatacttgcgctgtgtgtaaacaaagtctccagacccgtgactgt
gaacctaaactcttaccgtgtcttcactcattttgcttgaaatgtatcccactgccagag
cgacaagttaccgtacaggtgcctgggccgaacggacagccagacacccacatagtgaat
gtcatgcggtgtgtagtttgttgtcaagactgcaaacaaagtgacataattgacaactac
tttgtcaaggacaccaccgaggcctccaagacttcagatgaaaaatctgcacagatgtgc
accagttgtgaggacaatgcagataccattgggttctgtgcagaatgtggagagtggttg
tgcaaaacctgcatcgaggctcaccagagggttaaaatcaccaaggaccacaaaatccgc
aagaaagaggatgtctctgaagagtctgtaggtgtgtcggaacagaggcctgtgttctgt
cccatccacaaacaggagcccctgaaactcttctgtgaaacctgtgacacactcacctgc
cgggactgccaactgctggagcataaggagcacaggtaccagtttctggaggaggccttc
cagaaccagaaaggcatcatcgagacacacatggtcaaactgcaggagaaaaagacctac
gttcactactctcactctcaggtgacaagcaggataaaggaagttactgatacccataag
aaggtggaacatgacatcaagatagccgtgttcactcttatcaacgaaatcaacaagaag
ggcaagtatttactgcagcagcttgagagtgtgactaaggagaggagcatgaagctgttg
acccagcagacagacatcgccaacctggccaggcagatcctccatgtgctcaacttcacc
cactctgccattaacagtggcagcagcaccgccctgctttacagcaagaggctgatcatc
taccagctgcgcaaggtcctgaaggctggactggagccagtgcctcaggctaacggagct
gttcgctttttctgtgaccccacattctgggccaagaacgtggtcaacctagtagggaac
ctggtgatcgagaagatgccccaggctcagcaccctcccaacattatggtggggcccatc
tccccgggccacggccacccgggccatggcaaaagcccggggcagatcaacctggcccag
ctccggcagcagcacatgcagcagcaagccttcgcccagcagaaacaacagcagcagcac
caacaccaacaacaccaacaacagcagcagcagcaccaacaacagcaccagcagcagcac
caacagcagcaccaacagcagcaccaacagcagcagcaacagcagcagcaacaacagcac
caacaacagcagcaacaccaacagaggatccaggaacagatgcgtattgcctcccaaata
tcccagcagcaccccaggcaggctgtacctcagatggtacagcagcagcccccgcgcctc
atcagtatgcaggcccagcagaggggccccatgaacggcgggcccaacatgtaccccccc
caccacctgcgcctgcccccaggacagggccgcatgcccagctccagcgcccagccacgc
atgcccaacggccagcagtactcccccatgatgcagcctcagctgcagagacagatgact
gtagattctgagatgagcgaccacaggtttcgtttgttacatctcactgggcattcaaac
ccaggtcatgctggacccttcccagtggcatctctccacaacgtgagcgctgccaacccc
accagtcccaccagtgccagcatggccagcgcccatgcccaccgtggccccgccagcccc
atagtgggcgccatcgacctcatcccctccgtcaccaacccagagaacctgccatgccta
ccaaacatcccccccattcagctggaagacgcgggctccagcagcctggatgccctactg
agtcgctacatcttagccagcacataccctcagctgggcctggggccccccgggaacatg
aacctctcccacggaccctccacacactcccctggctcctcaggcttatcaaactcccac
acgcctgtgcggccatccagtacgtccagcacaggaagcaggggcagctgtggatctgcg
ggtaggccagggccagcaagcggcccaatggaacagcaggtcagagtcaagcaggagccc
ggtgccgagaaggagtgtggtttctcgggaaccaccacctccaacgtcaaaacggaacaa
gggaaggatggagggaggagcgcatgcatgatgagtagttcagagagcagacgtactccc
cctctccccgtgttgggctctgtgacttctggctcctctgtccaggacatcctcaagaag
gtgggggagcatgtcaaaactgagccccaggaccaggaggcctgcagtggggccaacaga
cctggcaacgcccctatcaccaccagcagcacatccactgtggcctctgccgcactgctg
accaatggcaagggagccgcgtctgctgccctgcgctctccacgcactgcacaggggacc
aaccagagcggtgcaggagggaaggaggatgaccccaacgaggactggtgtgctgtgtgc
aacaacgggggagagctgctttgctgcgaccgctgccccaaagtcttccacatcacctgt
cacatccccaccttgaagtgctccccgagtggagagtggatgtgcacgttctgccggagc
ctggcaagcccggagatggagtaccagcctgacgacgagcctcgtggcgaaaaggacaac
agtgagcagggcctgagtcctgaggaccagaggaggtgtgagcgcctcctgctgtatgtt
ttctgccatgatctcagtgaggggttccaggagcctgtccctccctctatccctaattac
tacaagatcatcaagaagcccatggacttgaccctggtgaaacagaagctacagttgaag
catgtccaacactaccagagcccgaaggattttgtctcggatgtgcgcctggtcttcagc
aactgtgccaagtacaacgagatgtctcgaataatccaggtatatgatgaggagaaacag
agtaatgtgcaggcggactcagaggtggcggaggcagggaaagctgtgagtttgtacttt
gaggagaggctgctggagctctatccagatgagagtttccccgaggtaccagaggagcct
gaggtaccagaggtacctgaggagccccaggccccagctggagaggaggcggatctcaca
gaagactccgaggatgagtttgtgcagcctaaacgcaagcggttaaaaacagatgaaaag
ccgatgcacatcaagtga
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integrated database retrieval system
