Salmo salar (Atlantic salmon): 106566935
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Entry
106566935 CDS
T04363
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106566935
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
106566935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
106566935
NCBI-ProteinID:
XP_013991025
UniProt:
A0A1S3LJK2
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All DBs
Position
ssa01:complement(128715301..128840925)
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AA seq
2163 aa
AA seq
DB search
MTTAANWVANGASLEDCHSNLFSLAELTGIKWRCYSFRGGGEYGPVISAPAQDDPVLRSF
MRCVQANLLCVWRRKVKPDAKELWIFWWGDEPNLSDVIHHELEVAEEGLWECGLSYECRT
LLFKAIHNLLERCLLDKDFVRIGKWFVKPYELEEKPLATSEHLSCSFTFFLHGESNVCTS
VEIAQHQPAYHITDDHIRLAQTSSAPVQVILSPYGLAGSLTGQAYKMSDQAVRKLMEEWS
YFYPMVLQRHREGGTGGAGMGGMGAEKEGSDLPFDPNSHVAVEVIVGGVRMIYPAAFVLV
AHGDLPVDQPLPAPGAQGLSRDPSHCSIPLTPPTSPEQPCSADSGFVTVSSILPAQERAI
GATNHSPKHSGKKLTNQVVHQAWKECYLNQLQHKCSVPSNVTPKKEAPNGVTTWDFIDSG
ERAPCSCSRLKQQQKQQQQKQQQQKQQQQTNTSSANPLSGANPTPSLGPALPPPSLPKHK
ATDKSEKPDKQPKRVAAMTPFHHRLSVGQEGCLEQDSTEGSQLGLVALDPLLDPMPTCKY
PKPLSAGRKGPQSLLHSPVSPLPPTLSPHPRVGQDPEVLDAPVGMAPCPDGASGLGVMEP
SATALYAAPLGPREREAGVGWWRGFRTPRADKAEFRPPELPSDRVEIKTETQVTEGVALK
RLFAQTEKCFKISEERVREHIQTLGLLQQPGVEGMGDLGDDPYDFKEGDIEYSFPTSKRL
KGRDPSKRGPKGEDISNGALPDGKDAMSIFSSAPKADDDSPQDDEAAKAQNPPLTRETDL
VVLISDLENIFDEDEEELGHTARVLVSGGEDRREGRVAVPYPSTVADLQRMFPTPPSLEQ
HPAFSPIMTYRDTPSQEPPAPSGGSDHPLGPLSSTQLQEYRMEVEEGMASPKHEDIKDFS
FVYRVPSVQPQMGCSMFAPLRTLPSQCLPPIKVPDQCYYRPSWALLPKMEHYSSLPPSFI
RDGYVNVPSVGDQEYAQLSASALSIGTTGSILPSPSPATPRFSVPTPRTPRTPKGVGTAS
GQGSVKQEGTGTELSSPASTPSTSLPMSSLTEPHASCPALPEAHSLYAALLLSDSVLNVF
KDRNFDSCCICACNMNVKGADVGVYIPDSTLEDQYRCMCGFSAIVNRRLAHGTGLFLEDE
LDIFGRGSEVGRAAERRLALCRRDPPMGDPRAKRPQDSSPAPSSVMGLLQEQCSQPISSL
ASLHLPPACSCHGRQGALLQSWMADKQWTDGSDACVECYNALVQGQQYVDNPAGGKVDPA
VVRSSALHSWPHTNVLDISILSSQDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPL
TWQQFHKMAGRGSYGSEESPEPLPIPTLLLGYYDNYDRNFLALSPLALPFWEKLLLEPYG
GQRDVAFLVLCPNSETLLAGAQAFFQELSAVYETCRLGKHRPLAKVSRDGLVRVGAETET
ETDKEKEKERHEEEQVDQWFTGPWAGQQHSDNLRKLQLYARACRKQLGPQLSALSLDSSL
LLPPKPQPPPAPTPSSAQPAPSSSQPPYGPGAPAEGESTAPPVAHSSESTPTPTAAASGQ
PGPAESTQGGSTEVKNTPNAPPPPPSQPETPESVAERERIGIPTLADSADSHAHPPAIVI
YVVDPFLCSGQARDGGGGEEEEGEEVETGSVWLLGLLRCYTEMLQTLPESMRPALVLQVV
PCQYLLQPASGESPLYLQHLRSLAFSAYSQCRRLLPTQTHIKSLTGFGPASTLESVLKSP
EHPSPLQGYSPPYILGPTRAKMPEPGEVWAEIPSRYNVLFVGYCLSHDQRWILVSCTDQQ
GELLETCIINIDVPNRARWPKVSARKMGLQKLWDWCVGIIQMTSLPWRIVIGRLGRLGHG
ELKDWSVLLGEHSLHSISRQLKEACRMCGISSADSPSILSACLVAMEPQGSIVVMPDAVT
MGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTQLAASSYPTEDNADDMFDLPFP
DELENDIGHDILNLHPSPNTSPVPSPGSPSGMGGSSHFQHNRSQGERFLSRENPPEELKQ
QPLALGYYVSTAQADSLPHWFWASCPQAQNQCPLFLKASLHHHIAIATAQSDEPNQTNSD
KTTKRIPHPLDSKTTSDVLRFVLEQYNALSWLTCNPATQDRRSCLPVHLAVLTQMYNAVL
NML
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgactacggcagcgaattgggtggctaacggggcaagccttgaagactgccactccaac
ctcttctctctggcagagctgacgggcatcaagtggaggtgctacagcttccgtggcggc
ggcgagtacgggccggtgatctcggcaccagcccaggacgacccggtgctgcgcagcttc
atgcgctgcgtgcaggccaacctcctgtgtgtgtggcgccgcaaagtcaagcctgacgcc
aaagagctgtggatcttctggtggggcgacgagcccaacctctctgacgtcatccatcac
gagctggaagtggccgaggagggactatgggagtgtgggctgtcatacgaatgccggacc
ctcctgttcaaagccattcacaacctgctggagaggtgtttgttggacaaggactttgtg
cggatcgggaagtggttcgtcaagccatacgagttggaggagaagcctctggccaccagt
gagcacctatcgtgctccttcaccttcttcctgcatggggagagtaatgtgtgcaccagc
gtagagattgcccaacaccagcctgcctaccacatcactgatgaccacatccgcctggcc
cagacctcctcagcccccgtacaagtgatcctgagtccgtatggtctggcgggctctctg
acgggccaggcctataagatgagtgaccaagccgtgaggaagctgatggaggagtggagc
tacttctaccccatggtgctgcagcgccatagagaggggggcacagggggtgccggcatg
gggggcatgggtgcggagaaggagggctctgacctgccgtttgaccccaacagtcatgtg
gccgtcgaggtcatcgtaggtggtgtgaggatgatctacccagcagcctttgtgttggtt
gcccatggcgacctgcctgtggaccagcccctacctgcccccggagcccaggggctcagc
agagacccctcccattgtagcatccccctcacaccacccacctcacctgaacagccctgc
tcagcagacagtggctttgtgacagtgtccagcatcctccctgcccaggagagggccatt
ggggccaccaaccacagcccaaagcattctgggaagaaactgaccaatcaggtggtgcat
caggcatggaaggagtgttatctcaaccaactgcaacacaaatgcagtgtgcccagtaac
gtgacgccaaagaaggaggcgccaaacggggtgaccacctgggactttatcgactcgggc
gagagggcaccctgcagctgctccaggttaaagcagcagcagaaacagcagcagcagaaa
cagcagcagcagaaacagcagcagcagaccaacacctcctctgccaatcctctgtctggt
gccaaccccaccccctccctgggcccagcacttcctcctccctccctgcctaagcacaag
gccacggacaagtccgagaaacccgacaaacagcccaagagggtcgccgccatgaccccc
ttccaccaccggctctctgtgggccaggagggctgcctggaacaagactccactgaaggt
tcccagctcggcctagtcgccctggaccctctcctggatcccatgcccacctgcaagtac
cccaagcccctctcagctggcaggaaaggcccccagtccctgctccactctcccgtctcc
ccattaccccccacgctcagcccccatccgcgggtggggcaggaccctgaggttctggac
gctcctgtgggcatggccccctgtccagatggggcgtcagggctgggggtgatggagccc
agtgcgactgctctctatgcagcccctctggggcccagagagagggaagctggggtgggc
tggtggaggggcttcaggactcccagggctgataaggctgagttcaggcctccagagctg
cccagtgacagagtggaaataaagacagagacacaggtcactgagggagttgcactgaaa
agactattcgcgcagacagagaagtgtttcaagatatctgaggagcgcgttagggaacac
atccagaccctgggtctactgcagcagcctggggtggaaggaatgggggaccttggggac
gacccatatgacttcaaggagggagacatcgagtacagcttccccacctccaaaagactg
aagggccgagaccctagcaagagaggccccaagggagaggatattagcaacggtgcactg
cctgatgggaaagatgccatgtccatctttagctctgcccccaaagctgatgatgactca
ccgcaggacgacgaggcggccaaagcccaaaaccctcctctaaccagggagactgatctg
gtggtcctcatctcagacctggagaacattttcgacgaggatgaggaggaacttgggcac
acagccagggtcctggtatcaggaggtgaagaccgaagggaggggagggtggctgtgccc
tatccttcaacagtagcagacctccagcggatgttccccacacctccgtccttggagcag
cacccagccttctcccccatcatgacataccgcgacacccccagccaagagcccccagcc
ccctcggggggctctgaccaccccctgggccccctgtcctccacccagctccaggagtac
cggatggaggtggaggaaggcatggccagtcctaaacatgaggacattaaggacttctca
tttgtgtaccgtgtcccgtctgtccagccacagatgggctgctcaatgtttgctccgctg
cggaccctccccagccagtgtctgcccccaattaaggtgcctgaccagtgttactaccgg
ccctcctgggccctgctgcccaagatggagcattactcctccctgccgccctccttcatc
agagatggatatgtcaacgtccccagtgttggggaccaggagtatgcccagttgagtgcc
agtgccctatccataggcaccaccggcagcatcctcccctcgccctcccctgccaccccc
cgcttctccgtccccacccctcgtaccccgcgcacccccaagggcgttggcacggccagc
gggcaaggctctgtgaagcaggagggcaccgggacagagctgagctcccctgcctccacg
ccctccaccagcctgcctatgagctccctgactgagccccatgcgtcttgccccgccctg
cccgaggcccacagcctgtacgccgccctgctcctctctgactcagtcctcaacgtcttc
aaagatcgcaacttcgacagctgctgcatctgcgcctgcaacatgaacgtgaagggtgcc
gacgtgggcgtgtacatccccgactccacgctcgaggaccagtaccgctgcatgtgcggc
ttcagcgccatcgtcaaccgccggctggcccacggcacgggcctcttcctggaggacgag
ctggacatcttcgggaggggctcggaggtgggccgggcagccgagaggaggctggcactg
tgccgcagagacccacccatgggagacccccgggccaagcgcccccaggactcctccccc
gccccttcctctgtcatggggctcctccaggagcagtgctcccagcccatctcctccctg
gcctccctacacctccctcctgcctgctcctgccacggccgccagggggccctgctccag
agctggatggctgataagcagtggacggatggcagtgatgcgtgtgtggagtgttacaac
gcgctggtacaggggcagcagtatgtggataaccccgccggagggaaagtagatccggct
gttgtgaggagcagcgctctacactcctggcctcacaccaacgtgttggacatcagtatt
ctgtcgtcccaggacgtggtgcgtatgctgctgtccctgcagcccttcctccaggacgca
atccagaaaaaacgtacgggccggacctgggagaacatccagcatgtccagggtccactc
acatggcaacagttccacaagatggccggccggggatcctacgggtcagaggagtcgccc
gagccccttcccatccctaccctgttgctgggctactacgataactatgaccgtaacttc
ctggctctgtcgcccctggcgcttcccttctgggagaagctgctgttggaaccatatggg
ggacagagggatgtggccttcctggtgctctgccccaactctgaaaccctgctggccggg
gcacaggccttcttccaggagctcagcgctgtctacgagacgtgtcggttggggaaacac
agaccacttgcaaaggtctccagagatgggctggtgcgtgtgggggcagagacggaaact
gagaccgataaggagaaagagaaggagaggcatgaggaggagcaggtagaccagtggttc
acagggccctgggctggacagcaacacagcgacaacctcagaaaactccaactctatgcg
cgcgcctgcaggaagcagctaggtccacagttgtctgccctgtctttggacagcagtctg
ttgttaccccccaagcctcagcctcctccagcccctacgccctcctcagcccagcctgcc
ccctcctccagccagcccccctatggtcctggggcccctgctgagggagagtcaacagcc
cccccagtggcccacagctcagaaagcaccccaacccccacagcagcagcctcgggccag
ccaggtccagcagagagcacccaaggagggtccactgaggtcaagaatacccccaatgcc
ccaccaccaccacctagccagccagagacccctgagagtgtggcggagcgggagcgaatc
ggcatccccacgctggcggactcggccgatagccacgcccaccccccggccattgtgatc
tacgtggtggaccccttcctgtgctcgggccaagcgagggatggaggaggaggagaggag
gaggagggtgaggaggtggagacaggcagtgtgtggttactagggctgctgcgttgctac
acagagatgctacagacattgccggagagcatgagaccagcactggtgttacaggtggtg
ccatgtcagtacctgctccagccagccagtggtgagagccctctgtacctgcagcacctg
cgctccctggccttctcagcctactcccagtgcagacgcctcctacccacacagacacac
atcaagtctctgactggctttggccccgcctccaccctagaatctgtgctcaagagccca
gagcaccccagccctctacagggctactctcccccgtacattctgggtcctacccgtgcc
aagatgccggagccaggggaggtgtgggcagagatcccttccaggtacaacgtgctgttt
gtgggctactgcctgtcccacgaccagcgctggatcctggtctcctgcaccgaccaacag
ggagagctactggagacctgcatcatcaacatcgatgtgcccaacagagcgcggtggccc
aaggtctcagccaggaagatgggactgcaaaagttatgggactggtgtgtcggcatcatc
cagatgacctcactgccatggaggatcgtaattggtcggctgggcagactaggacatggt
gaactgaaagactggagcgttctcctgggggagcactccctccactccatcagtcgccag
ctgaaggaggcatgtcgtatgtgtggcatctcctccgccgactccccctccatcctcagc
gcctgcctggttgccatggaaccccagggctccatcgtggtgatgccagacgcagtgacg
atgggctcggtgtttggtcgcagcacagccctcaacctgcagacgtcccagctgaacacc
cctcaagacgcttcctgtacccacatcctggtattccccacctccgccaccacacagctg
gctgccagctcctaccccacagaggataacgccgacgacatgttcgacctgcctttccct
gacgagctggagaatgacataggacatgacattctcaacctgcacccctcccccaacacc
tcccccgtaccctccccaggctccccctctggcatggggggaagctcacacttccagcat
aacaggagtcagggagagaggtttctgtccagggagaaccctccggaggagctgaagcag
cagcctctagccctgggatactatgtttccactgcccaggctgacagcctgcctcactgg
ttctgggcctcctgccctcaggctcagaaccagtgtccactctttctcaaggcatctcta
caccaccacatcgccattgccacagcccaatcagatgagcccaatcagacaaactcagac
aagacgaccaagaggatacctcaccctctggactccaagaccacctctgacgtgctcagg
tttgtgttggagcagtacaacgccctctcgtggctgacgtgtaaccctgccacccaggac
cgccgctcctgcctgcccgtccacctggccgtgctcacacagatgtacaatgccgtcctc
aacatgctctag
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