KEGG   Salmo salar (Atlantic salmon): 106567205
Entry
106567205         CDS       T04363                                 
Name
(RefSeq) lysine-specific demethylase 5B-B-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sasa01009]
    106567205
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sasa03036]
    106567205
Enzymes [BR:sasa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     106567205
Protein phosphatases and associated proteins [BR:sasa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106567205
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106567205
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 PHD-1st_NSD
Other DBs
NCBI-GeneID: 106567205
NCBI-ProteinID: XP_013991696
UniProt: A0A1S3LLD9
LinkDB
Position
ssa13:40536554..40576388
AA seq 1543 aa
MTQPRPDEFKPPQECPVFEPSWEEFADPFAYINKIRPIAEKTGICKVRPPPDWQPPFACD
VDRLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCSLKIPHVERKILDLYQLNKNV
ADEGGFDIVCRDRRWTAIALKMGFAPGKAVGSHLRSHYERLLYPYNLFQSGANLLAPELA
SKLMRLVSAPELDTFVQEPTLPVDTSDKECKPPDLTERQHFVEPTESCCNSAHRAKRMRA
EVDALVVQSHTHLSEELLLKPSGCVKTEPGTEPCENNRPNLRRRMGSFVAKPEPDIPILV
KQEPIEPVSEADKNKSRYKKKTSIDAPPPAVSVVDLYMCLVCGSGSDEDRLLLCDGCDAS
YHTFCLIPPLHDIPKGDWRCPKCLAQECSKPQEAFGFEQAYRDYSLRAFGEMADSFKSDY
FNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPIKNGRFKVSEKDEK
YLKCGWNLNNMAMMDPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHW
GEPKTWYGAPGFAAEQLEAVMKKLAPELFQIQPDLLHQLVTIMNPNTLMSYGVPIYRTNQ
CAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWMALGRQCVDHYRLLHRYCVFSHDEMI
CKMASKANSLDVVLASAVQKDMKDMIREEQDLRDKVRKMGVLHCEQAEYDLLQDDERQCA
KCRTTCFLSAITCPCSPGQLVCLHHIQDLCSCPLTNYTLNYRFTLDDLYPMMNVVKQRAE
SYDEWASRVTETLEAKLDKKKSLSVFRSLINESESKMFPDNDLLRQLRLVTQDAEKCFSV
AQQLLNGKRQTRYRCGGGKTQSQLTVQELRSFVRQLYNIPCSLPQAPKLKDLLNCIEDFQ
QHSEKVLMDEASGTAVIQSLLDVSFDFDVELPELPILRERLEQARWLEGVQQTSAQPSTL
TLETMRRLIDQGVGLTPHPSVEKAMAHLQELLTVSEHWEEKTSILLKARPPPSIEVLSEA
AEKVVGIPAYLPNCMMLKDSISRAREWLQEAEAFQDGDSIPLFDELSDMVIRGQAIPVQL
DSLKHLEFLVAELQAWKESAAKTFLIKNSHFTLLEVLCPRFEVGAGSPKRKSKKAKDCSK
KKMVKLDCLSDVEKALLETKDTTSALATLGEVRLREMWALSSLRAANESKLLPTADCMDL
KVCVCQNPPMGAMLQCELCRDAFHSVCVRAPSDSRSTQAWLCPDCRRSEKPPLDKVLPLL
ASLQRIQVRLPEGDALHYLVERTVSWQHRARQVSASCGLPDLEENFTTSPSPVGKPPCLT
PEWNRTSHDQMVFYTEQRCIPLQGLSVELEELMVEGLLLQVSLPEITQLYHVLLNGLGTH
HTHGRTSQQEDDPSGCDKRKQCNSQGRSSPQKEDGLKKEVVNGAEKKAKRRLEREALETE
RRDKAKKLQNKRQKMNKEKNLERRAASTSSSPRSDFSQSDDSEEEMAMCPAEGCQQPEGD
EVDWVQCDGSCNQWFHQVCVGVTAELAEKEDYVCVSCTISDGR
NT seq 4632 nt   +upstreamnt  +downstreamnt
atgacccagcctcggccggacgagttcaagccgcctcaggagtgcccagtcttcgaacca
agctgggaggaatttgccgatccttttgcttatataaataagatccgtccaattgcagaa
aaaacgggtatttgtaaggtccgcccgcctccggactggcagcctccatttgcatgtgat
gttgacagactgcacttcactcctcggatacagaggctaaatgaactggaggcacagacc
agagttaagcttaacttcttggaccagattgcaaagttctgggagttgcaggggtgttcc
ctgaagattcctcatgtggaaaggaagatattggacctgtatcaactcaacaagaatgtt
gcagatgagggcggatttgatattgtgtgtcgcgatagacgttggacggcgattgcgctt
aagatgggctttgctcctggcaaggctgttggctctcacttacggtcacactatgagaga
cttctctacccctacaacctcttccagagtggagccaacctcctggcaccagagcttgca
tccaagctgatgcgtttagtgtctgctcctgaacttgacacgtttgtccaggagccaacc
ctgccagttgacacgagtgacaaggagtgtaaaccccctgacttgaccgagaggcagcac
tttgttgagccaactgagtcctgctgcaacagcgcccacagagcaaagcggatgagagct
gaggtggatgcccttgtcgtacagagccacacacacttgtcagaagaactcctcttaaaa
ccatcaggttgtgtgaagacagaaccaggaactgaaccctgtgaaaacaacagaccaaat
ctgaggaggaggatgggctcttttgttgccaagcccgagccagacattcccattctagtg
aaacaagaacccatcgagccggtgagcgaggcagacaaaaacaagtctcgatataagaaa
aaaacaagtattgatgccccacctcctgcagtgagtgtagtggacctgtatatgtgtctg
gtgtgtggcagcgggagtgacgaggatcgtcttctgttgtgtgatggctgtgacgctagt
taccacaccttctgtctcataccccctctacacgacatccccaaaggagactggaggtgc
cccaagtgcctggctcaagagtgcagcaaacctcaggaggcatttggctttgagcaagca
tacagggactactctttgcgggcttttggagaaatggcagactccttcaaatctgattac
ttcaacatgccagttcatatggttcccacagagttggtggaaaaagagttctggcgcttg
gtgagcaccatcgaagaggacgtcacagtggagtacggagcagatatagcctccaaggag
tttgggagcgggttccccatcaagaatggaagatttaaggtttcagaaaaggatgagaag
tacctgaagtgtggctggaacctgaacaacatggcgatgatggacccgtcagtgttgact
catgtcacagcagacatctgtgggatgacgctaccttggctctatgtaggcatgtgcttc
tcctccttctgctggcacatcgaggaccactggagctactccatcaactacctgcactgg
ggggaaccgaagacatggtatggagcacctggctttgctgcagaacagctggaggctgtg
atgaagaaactagctccagagctgtttcagattcagccagatctcctccaccagctggtc
accatcatgaaccccaacaccctcatgtcctacggggttccgatttacagaaccaatcag
tgtgctggtgagtttgtcattactttccccagagcctatcacagtggtttcaaccaaggt
tttaacttcgctgaggctgtcaacttctgcactgtggactggatggcattaggccgccaa
tgcgttgaccactacagactgctgcatcggtactgtgttttctcccacgacgagatgatc
tgcaagatggcctccaaggccaacagtctggatgtggtcctggcgtcggctgtccagaag
gatatgaaggatatgatcagagaggaacaggacctacgagataaagtccgcaagatgggg
gtgttgcattgtgagcaggcggaatacgatctcctgcaggatgatgagcgacagtgtgcc
aaatgtaggaccacctgtttcctgtctgccatcacctgcccctgcagccccggccagctg
gtctgtctccaccacatccaggacctctgctcctgccccctcaccaactacacactgaat
tatagatttacactggatgatctgtaccccatgatgaatgtggtgaagcagcgagctgag
tcctacgacgagtgggcatcccgcgtgacagagactctggaggctaagctggacaagaaa
aaaagcttgtcagtcttccgctccctcattaacgaatcagagtccaagatgttccctgac
aatgacctcttgcgtcagctccgtttagtcacacaggatgcagagaagtgcttctcagtg
gcccagcagctactcaacggcaaaaggcagactaggtatcggtgtggtggggggaagacc
cagagccagctgaccgtgcaggagctgaggtcatttgtcaggcaactttacaacatccct
tgcagccttcctcaagcccccaaattaaaggatctcttgaattgcatcgaagacttccag
cagcacagtgagaaagttctgatggatgaggccagcggcacagcggtgatccagagtctt
ctagacgttagctttgactttgatgtggagctgcctgaacttccgatactacgggaaagg
ctggagcaagcccgttggctggagggtgtgcagcagaccagcgcccagccatccaccctc
accctggagaccatgcggaggctgatagaccagggtgtgggcctgacccctcacccctcc
gtggagaaggccatggctcatctgcaggagctgctcacggtgtctgaacattgggaggaa
aagaccagcatcctcctcaaggccaggccccccccatctatagaagtcctctctgaagca
gctgagaaggttgtgggtatacctgcttacctccccaactgtatgatgctgaaggactcc
atcagtagggccagggagtggcttcaggaagcagaggcatttcaggatggagattccatt
ccattgtttgacgagctctctgatatggttatacgaggacaagccatcccagtccagctg
gactctctaaaacatctagagtttctggtagcagagctgcaggcctggaaggagtctgct
gctaaaactttcctcatcaaaaactctcacttcactctgcttgaggttctgtgtccaaga
tttgaggttggagcagggtctccgaaaaggaagtcgaaaaaagctaaagactgcagtaag
aagaagatggtgaagctagactgtctcagtgatgtggaaaaagctctcttagagaccaag
gacactacctcagctctggcaactctcggggaagtgcggttacgggagatgtgggccctc
tcctccctccgggcagctaacgagtccaagctcctccctacggcagactgcatggacctg
aaggtgtgtgtgtgtcagaatccccccatgggagccatgttacagtgtgagctctgccgg
gacgccttccacagcgtgtgtgtgagggctccctcagactcccgttcaacccaggcctgg
ctgtgtccagactgccgacgctcggagaagccccccctggacaaggtcctgcccttgctg
gcgtcgctgcagcgtattcaggtgcgtctaccggaaggcgatgcgcttcactatttggtt
gagagaacagtcagctggcaacaccgtgcgcgacaggtctcggcctcctgtggccttcca
gacctggaggagaactttacaacttcaccatctccggttggaaagccaccatgtttgact
ccagagtggaacaggacaagtcatgatcagatggtcttctacactgagcaacgatgcatt
cctctgcagggtctgagtgtggagctggaggagctgatggtggaagggctcctgctgcag
gtgtctctgccagagatcacacagctctaccatgtgttactgaacgggctgggaacgcat
cacactcacggacgcacgtcacagcaagaggacgacccctcgggctgtgacaaacgcaag
cagtgcaactctcagggaagaagctctccacaaaaagaggatggcctgaaaaaggaagta
gttaacggagcagagaagaaggccaagcgacgcctggagagggaggctctggagacagag
cgcagggacaaggctaagaagctccaaaacaagagacagaaaatgaacaaggagaagaac
ctggaacgcagggcagcctcgacctcctcatctcctcgttccgacttctcccagtcagac
gactctgaagaggagatggccatgtgtccagcagagggatgccagcagccagaaggagat
gaggtggactgggtccagtgtgacggcagctgtaaccagtggttccaccaggtctgtgtg
ggtgtgacagccgagttggctgagaaagaggactatgtgtgtgtcagctgtacaataagc
gatggccgctga

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