Salmo salar (Atlantic salmon): 106567258
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Entry
106567258 CDS
T04363
Name
(RefSeq) trichohyalin-like
KO
K25949
coiled-coil domain-containing protein 50
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106567258
Membrane trafficking [BR:
sasa04131
]
Autophagy
Other autophagy associated proteins
Others
106567258
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
106567258
NCBI-ProteinID:
XP_013991812
UniProt:
A0A1S3LLF6
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All DBs
Position
ssa13:complement(41739084..41764542)
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AA seq
835 aa
AA seq
DB search
MTELEIDQSHLPRVQEVCHVFAVLEDGALAHNLQEQEIEQYYTTNMQKNQLVQNDIRIAK
RLQNEEERAQHTALLSQASRQLQEQDSEYARMIQEEILRCADEEAQRREQDDEEMAKRIQ
EEEELRVRQRRSRQESLSDDSASVPASPSPCPHQPALSTSPIHEELHYQPATSRWQCSIS
NTQPQSDSTAVPLSEPYRTAGQNNRTLSSHDRHMDPPRLIRNDLQCPPPDYLSDEGSENT
DTVFPEHLPPSRPCRLDTRLNTAPSGYRTPVHQPQERSSGSLSRHNRFREGHSKVWERGR
GEREERGSLQDRNPRVEHDGGYDRDPRSEDGREQHYRGRTSDPARGLQDRDRDEVRRSWT
HRETSDKKQVRFQDDTSRRCHSYHGDSRRAVNVWELIAHDLRERGVALRQSFNGRSRSQG
ARGKGRDSQVHDGGNTIACNNSQPQRAFKMAIRNRPSYHGDVRERSASQRQGHSDRGYEG
EREKIHENLTIVEGSGTEVCDEHSSDDRLFSREREGSSRRTSGDPRHKVRSGGDQEREEG
RGDRHYHSERRVRWEHRVRSESEHQHGHEEEERPPPSQKVSQRSQSFCSRGPSIRARSKH
TPRAGAALQPEKGACLDLGELQQVLLDEELARRLQEEEKLLRRSPPARPSHYQRDSFPAG
DFRVAQVAQDEEIARFMQKQEMKSKRRSRDLDCPGSRREPHDLADPYDRRTARERQFTVL
SQIQRERLDSENLPSPTEDCSPDYQAPRPTTQPQQPIRNIAEELDPTFKASRQGKESIRA
GPTISGTSSCQSHHTPQSGLHDFMEEPTFIPPTKRQSAKSVRAKSKEKKENCKQQ
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgacagagctggagatagatcagtcccacctgccacgggtccaggaagtgtgccatgtt
tttgctgtcctagaggatggagcgttggcacacaacctacaggaacaggaaattgagcag
tactacactaccaacatgcagaagaaccagctggtgcagaatgatatccgcattgccaag
aggctgcagaatgaggaggagagagctcaacacacagccctcctgagccaggcatctaga
caacttcaggagcaggactcggagtacgccaggatgatccaggaggagatcttgagatgc
gctgatgaggaggctcagagaagggagcaggacgatgaggaaatggctaaacgcatccag
gaagaggaggagctgagggtcagacagaggaggagtaggcaggagagcctcagtgatgac
agtgccagcgtccctgcctcaccctcgccttgcccacaccagcctgctctcagcaccagc
cccatacatgaagagctgcactatcagcctgctaccagcaggtggcagtgttctatctct
aacacacagccacagtcagactctacagctgtgcctctgtctgagccctacaggacagca
ggacagaataacagaacgctatcatcacatgatagacacatggatccccctagactcatc
agaaacgacctccaatgccctccacctgactatctgagtgatgaaggctcagagaacaca
gacactgttttccctgaacacctccctccatcccggccgtgtagactggatacacgtctc
aacactgcccctagtggttacaggactcctgtgcaccagccacaagagagaagcagcggg
agtctcagccgtcacaaccgcttcagagagggccatagcaaggtttgggagaggggcaga
ggagagagggaagaaagggggagtctgcaggacaggaatcccagggtagagcatgatggg
ggttatgacagggaccccaggtcagaggatggcagagagcagcactacagaggaagaaca
agtgaccctgccagagggttgcaggatagagaccgagatgaggtcagaaggagctggacg
cacagagagaccagcgacaagaaacaagtccgcttccaggacgacaccagcaggcgctgt
catagttaccatggcgacagcaggcgggcggtaaatgtctgggagctgattgcccatgac
ttaagagagcggggtgtggccttgaggcagagcttcaacgggaggtcacggtcacaggga
gcaaggggtaagggcagagacagccaggtgcatgatgggggaaataccatcgcctgtaac
aactctcaaccacagagggcttttaaaatggccatccgcaacaggcccagttaccatgga
gatgtcagggaaaggagtgcctcacaaagacaaggccacagtgaccgaggctatgagggg
gagagagagaaaatccatgaaaacctgacaatagtggagggtagtgggactgaggtctgt
gatgaacacagtagcgatgataggctattcagcagagagagggaggggagcagcaggagg
actagtggagatcccagacacaaggtccgctcaggtggggaccaggagagggaggagggc
aggggcgacaggcactaccatagcgagcgcagggtgaggtgggagcacagggtgaggagt
gagagtgaacaccaacatgggcatgaggaggaggagagacccccaccgtcacagaaagtc
tcccagcgcagccaaagcttctgcagcagagggccctccatcagggccagatccaaacac
acccccagagcaggagccgctctgcagccggagaaaggggcgtgtctggacctgggggag
ctgcagcaggtgctgctggatgaggagctggccaggaggctgcaggaggaggagaagctg
ctgaggaggagccctccagcccgtccctcccactatcaacgtgattccttcccagcggga
gacttcagagtggcacaagtggctcaggatgaggaaatcgcccgcttcatgcagaagcag
gaaatgaagtcaaagcgtcgttcacgtgaccttgattgcccggggtcacggcgtgaaccg
catgacctggctgacccctatgacaggagaactgccagagagagacagtttactgtcctg
tctcagatccagcgggagagactggactcagagaaccttccatctcctactgaagactgc
tctccagactatcaggcccctagacccacaacccaaccacaacagccaatcagaaacatt
gcagaggaactggacccaactttcaaggccagtagacaaggcaaggagagcatcagagca
ggaccgacaatctctggcacatcctcctgccagtctcatcacactcctcagtccggctta
catgactttatggaggagccaacgttcatcccacccaccaagaggcaaagcgccaaatct
gtacgcgccaaatccaaagagaagaaggagaactgtaagcagcagtga
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