Salmo salar (Atlantic salmon): 106567327
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Entry
106567327 CDS
T04363
Name
(RefSeq) iroquois-class homeodomain protein irx-1-B-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106567327
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
106567327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PCB_OB
DUF4763
MscS_TM
Motif
Other DBs
NCBI-GeneID:
106567327
NCBI-ProteinID:
XP_013991937
UniProt:
A0A1S3LLU0
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All DBs
Position
ssa13:complement(37493615..37495111)
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AA seq
331 aa
AA seq
DB search
MSASQIGFGNFFFERNINMLPGYQIPVLGCQPGVQQQQAPHLAAMAGVPLAYSGLQGYNF
IPYPHYRHIAHMNNSFDLKTVSPYYEALLGRGGPFYPQYRPGATDDPSRVAKVATRESTS
ALKAWLNEHLKNPYPTKGEKIMLAIVTKMSLTQVSTWFANARRRLKKENRVSWAFKGKSD
EEEGESDEEKSDGSLQTSALVDEDEIDLQTVDDKVEDIGHRVDNSTPELVDARLEKQSSD
DHRDSTRAHGENDVEKSDTERTSSPSRLGCKDNVECQKPKIWSLAETATSETVKKPHQSC
HPRSTEMGKFWSEWASRNGLYIPRYTAHDIL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgtcacaaattggatttggcaacttcttctttgaaagaaacatcaacatgctc
cctggatatcagataccggttttgggatgtcaacccggggtacaacagcaacaagcccct
catcttgctgcgatggctggggtccctttggcatattcaggactacagggatacaacttt
atcccctatccacactacagacacattgcgcacatgaacaactccttcgacctgaagact
gtctctccgtattatgaagcgcttctcggccgaggagggccgttctacccgcaataccga
ccaggcgcaaccgatgacccaagcagagtcgccaaggtggctacccgggaaagcaccagc
gcgctcaaggcctggttgaacgagcatctcaagaatccatatcctacgaagggcgagaag
atcatgcttgccatcgtaaccaagatgagcctcacgcaggtgtcaacttggtttgccaac
gccaggcgacggctgaagaaggagaatagggtgagctgggcgttcaaggggaaatctgac
gaggaggagggcgaaagcgacgaggagaagagtgatggctctctgcagacaagcgcgttg
gttgatgaagacgaaatagatcttcaaaccgtcgatgacaaggtggaggatattggacat
agagtggacaactcaacgccagagttggtggacgcacgcctggagaaacaatcaagcgat
gaccatagagacagcacgcgtgctcacggggaaaatgatgtcgaaaagagtgacaccgaa
cgcacatcatccccatctcgtctaggatgtaaggacaacgttgagtgtcaaaagcccaaa
atatggtctttggcagaaaccgcgacctcggaaacggtgaaaaagccccaccagtcgtgt
catcccaggagcacagaaatgggcaaattctggtcagaatgggcatcaaggaatggactg
tatattcccagatatactgctcacgatattctttaa
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