Salmo salar (Atlantic salmon): 106567334
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Entry
106567334 CDS
T04363
Name
(RefSeq) nuclear receptor subfamily 4 group A member 1-like
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106567334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106567334
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
106567334
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
106567334
Nuclear receptors [BR:
sasa03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
106567334
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
106567334
NCBI-ProteinID:
XP_013991943
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Position
ssa13:40099377..40105240
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AA seq
587 aa
AA seq
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MGSQGGSDCLFQVSSFISEMNNVPPHGAQPYENSLYNSESLSLDLTSRLAMDVSSHADQL
SAPSIPSINSLVGTYAGEFNASQIATAPTTASDPESPFKLDDFQVYGCYPGTLALSYFDE
ALSSGGSDFFVNPVSAQSPCTPGFQTQPASVWDSAFGPYSPSLDSWVADKTALTQPSSFF
TFCPGSVEDLSPLGHPQPQLAEQDPFSLGQQPPSPLSFSPLTQEPGTLDVSGLIEGRMSA
KPHSPTENEGLCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKKSKYVCLANKDCPVDKRR
RNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKAVQDLSSAVSRVDIIASLVRE
YIESNSGVGKLDYSKYQETVVSLSEKENTCDIKQFYNLLTESMDVIRKWAESIPGFTAFC
SEDQELLLESAFLELFILRLAYRSNPETDKLIFCNGMVLHRMQCIRGFGDWIDSIMDFSQ
SLHRMNLDVSSFSCLTTLVIITDRHGLKDPKRVEEFQSQLITCLRDHVSSCAPDSTGPNY
LSRLLGKLPELRTLCTQGLQRIFYLKLVDLVPPPPIVDRMTMDILPL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtcagggaggctcagactgcctttttcaagtttcaagttttattagtgaaatg
aataatgtccccccacatggagctcagccttatgagaacagcctctacaactcagagtct
ctgagcctggaccttacctcaaggttagctatggatgtgagtagtcatgccgaccagctc
tctgccccttccattcctagcatcaactccctggtgggcacttacgctggtgagtttaat
gccagtcagattgccacagctcctaccaccgcctcggaccctgagtcgcccttcaagctg
gatgacttccaggtttacggctgctaccctggcaccttggccctgagctacttcgacgaa
gccctgtcttctggtggctctgactttttcgtcaaccctgtgtcagcccagtctccctgt
actcctggcttccagacccagcctgcgtcagtttgggactcggccttcggtccatactct
cccagcctggacagctgggtggctgataagactgcattaacacagccatcctctttcttc
accttctgtcccggctcagtggaggatctgtctcctctgggccatccacagccccagctg
gctgagcaagaccccttctctctgggccagcagcccccctcccccctgtccttctcccct
ctaacccaggagccaggcaccctagatgtctcaggcctcattgaagggagaatgtctgcg
aaaccgcacagccctactgaaaacgagggtctctgtgctgtttgtggggacaacgcctcc
tgccagcactatggggttcgcacctgtgagggctgcaaaggttttttcaagcgtactgta
cagaaaaaatctaaatacgtgtgccttgccaacaaggactgtccagttgacaagcggcga
cggaaccgctgtcaattctgtcgtttccagaagtgcctggcagtaggcatggtgaaagaa
gttgtgagaacagatagcttaaaaggtcgaagaggtcgtctgccctccaagccaaaagca
gttcaggacctatcgtctgctgtgtctcgagtcgacatcattgcctctcttgtgagagaa
tacattgaatcaaactctggtgttgggaaactggactactccaagtaccaggagactgtg
gtcagtctgtcagagaaagagaacacttgtgacatcaaacagttctacaacctcctcaca
gagtccatggacgtgatcaggaagtgggctgagagcatccctgggttcaccgccttctgc
tccgaggaccaggagctgctactggagtcagccttcttggaactgttcatcttgcgacta
gcatacaggtccaaccctgagacggacaagctgatcttctgcaatggcatggttcttcac
cgcatgcagtgtatacggggcttcggtgactggatagactccatcatggacttctcccag
agcctccaccgcatgaacctggacgtgtcatccttctcctgcctcacaactctggtcata
atcactgaccgccatggcctgaaggatccaaagcgggtggaggagttccagagccagcta
atcacctgtctcagagatcacgtctccagctgcgcccccgactccactgggcccaactac
ctgtcccgccttctgggaaagctgcccgagctacggactctctgcacccagggcctgcaa
cgcatcttctatctcaagcttgtggacttggtcccaccaccccccatagttgacagaatg
accatggacattctgcctttatga
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