Salmo salar (Atlantic salmon): 106567338
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Entry
106567338 CDS
T04363
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04020
Calcium signaling pathway
sasa04080
Neuroactive ligand-receptor interaction
sasa04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106567338
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106567338
04081 Hormone signaling
106567338
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sasa04030
]
106567338
G protein-coupled receptors [BR:
sasa04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
106567338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
106567338
NCBI-ProteinID:
XP_013991947
UniProt:
A0A1S3LLT9
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All DBs
Position
ssa13:complement(40300207..40307168)
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AA seq
402 aa
AA seq
DB search
MENTTDTSQDVLNFTQSEVLTNMPQNSIEVQVITIVLALIICGVGIAGNIMVVLVVLRTK
HMMTPTNCYLVSLAIADLVVLLAAGLPNISEVVDSWIYGYAGCLCITYLQYLGINVSSCS
ITAFTIERYIAICHSIKAQFICTVSRAKRIIACVWIFTSLYCIMWFFLVDTNETFYADGV
VVSCGYRVSRNLYMPIYFLDFTLFYVVPLIVATVLYGLIAKILFMSPLPTNLNDRCEGSI
HQGRFSSNVKVSGKSNKGAVTSRKQVTKMLAVVVILFALLWMPYRTLVVVNSFMDPPYLN
TWFLLFCRMCIYINSAINPIIYNLMSQKFRAAFKKLCKCKGQDPEKVTKYSVPMYYSVMK
DSSRESPEQTEQEDVSSFGNTSVKRVNFTDECGDTGTMFSIA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggagaatactactgacacctctcaagatgtcttaaatttcacacagagtgaagttctg
accaatatgccacagaactccattgaagtgcaagttataacaattgttctcgcacttata
atatgtggagttgggattgcggggaatattatggtggtgttggttgtgctgcgtaccaag
cacatgatgacccctactaactgttatcttgtcagtctggctattgcggaccttgtcgtc
cttttagcggcaggtttacctaatatttccgaagtagtcgactcttggatatacggttac
gctgggtgcctttgtatcacatacctgcaatatctgggtatcaatgtatcatcctgctcc
atcacagccttcaccattgagcgttacattgctatctgccactccatcaaggcgcaattt
atttgcaccgtgtctcgggcgaagaggataattgcctgtgtgtggattttcacctcgctg
tactgcataatgtggttctttttagtggacacgaacgaaaccttctacgccgatggggtg
gtggtcagctgtggttaccgtgtctccagaaacctctacatgccaatttacttcctagac
tttactttgttttacgtcgtccctctcattgtggctactgtactgtacggtcttatcgca
aagattttatttatgagccccttgccaaccaatctcaacgacagatgtgaaggttctata
caccaggggcgattttccagcaacgtgaaggtgtcgggcaaatcgaacaagggtgcagtg
acgtcaagaaaacaggttacaaagatgctagcagtggtggtgattcttttcgccttgctc
tggatgccataccggacactggtggtggtcaactctttcatggacccaccctacctcaac
acgtggttcttgctcttctgccgcatgtgcatctacatcaacagcgccatcaacccaatc
atctacaacctcatgtctcagaagttccgggccgccttcaaaaagctttgcaagtgcaag
ggccaagacccagagaaagttaccaagtacagtgtgccgatgtattacagtgtcatgaaa
gactcttcccgtgagagccctgagcagacagagcaggaggatgtcagcagctttggtaac
actagtgttaagagggtcaacttcacagatgagtgtggggacaccggcactatgttcagc
attgcctga
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