Salmo salar (Atlantic salmon): 106567400
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Entry
106567400 CDS
T04363
Symbol
rnf43
Name
(RefSeq) ring finger protein 43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106567400 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106567400 (rnf43)
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106567400 (rnf43)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106567400 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
PA
Motif
Other DBs
NCBI-GeneID:
106567400
NCBI-ProteinID:
XP_013992058
UniProt:
A0ABM3CS05
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All DBs
Position
ssa13:complement(47440609..47625261)
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AA seq
862 aa
AA seq
DB search
MTVPQRRLAGLWPWLLIAALQVVFGQTGLELAAAVETERSAPRAVIKVTLLRHEPTGKPI
TLEGLFVGGSAGSAEGKLMQSHPLSLCNTSEDERQESDFISIVKLESPERKVPQCLPLLK
KARLALERGAQAVIFDVTDDNDAALELHESDSLPLPVVLVKAEDAEELMGLVNKNEEARV
RIDIKKEDPKWPHYDVGILLTIVLAILAIVLIFAFRYRCKSNRTWDSVHQQTMRAISRLE
TRMYSSQGCGGSQRHRGGWGSNSSSNSSPVCAICLEEFLDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGTELSRQPQRSRLQQTPEHSQGFLHAHPYPHAFPQHPIPFSMRP
HYPRGPSGPYPSLGHYSSSPPLDPQTLRFLPSWPLGSGCGYIHPTEGPGRPHKAGSSCRT
AGHPLGSHYGPGSHRSCHAYRSGCPAQRSNSSSRLHHTPSFAPRASEGGAHSRGGEGGSC
SGGSYRTERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDY
DPFVYYGPGLGRTGRRDSMEAGAQRPRSLDSVMNRDRGRGSPEEQPQAVFSHVHYHRHRH
HHYGEDGEREHAQGQGPGRGSDQEQGAAVAIGSGSGSPPALDKDFPVCPLKHSPCQCPKA
EHTDSREAHCHGIEGQDHELSLSPPSGPLPVLVAPAPLVAPVPCCHQDHGHGGHPHRRAD
RLGGCVLDGPSVLFHQSLELQDDCSIHIHYGQGPSYCCPPPDLPVPVPFILDSGGMGALG
GLEDWPCCGGPHHVVWQKRVQQAHSEPQLLGPGLRGPMDRPPPPCSKRHHGHHSPAHDRN
TDFCLYCQTLHNNQGSEEESGV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttccccagcggcgattggccgggctctggccgtggctgctcatagcggccctg
caggtggtgttcggccagacgggcctggagctggcggcggccgtagaaacggagcgctcg
gccccaagggctgtcatcaaggtgacactgctgagacacgagcccactgggaagcccatc
actctggaagggctgttcgtcggagggagcgccggttctgcagaggggaagctcatgcag
tctcaccctctgtccctgtgcaacaccagtgaagatgagcgccaggagtctgacttcatc
agcatcgtcaagctggaaagcccggagcgcaaggtgcctcagtgtctgcccctgctcaaa
aaggctcgcctggcactggagagaggtgctcaggctgtcatcttcgatgtcaccgacgac
aacgacgctgctctcgagctgcatgagtctgactccctgccgcttccggtggtgctggtg
aaggctgaggatgctgaggagctgatgggactggttaacaagaacgaggaggctagagtc
cgcatcgacatcaaaaaagaggacccaaaatggccccactatgatgttggtatcttgctc
actatagtcctggctattctggccatcgttttgatctttgccttccggtaccgatgcaag
tccaacagaacctgggactcagtccatcagcagaccatgcgagccatcagtcgtctggag
acgcgaatgtacagctctcagggctgcgggggctcacagcgccaccgtgggggctggggg
tctaatagcagctccaactccagccccgtctgtgccatctgtctggaggagttcctggat
ggacaggacctgaggatcatctcgtgtgctcatgagttccataaggagtgtgtggacccc
tggttgctgcagcaccgcacctgtcctctctgcatgcacaacatcatgggtacagagctg
tcacgtcagccccagaggagcagactgcagcagacccccgagcacagccagggtttcctg
cacgcccacccctacccccacgccttcccccagcatcccatccccttctccatgaggcct
cactacccccgtggcccctccggcccctacccctccctgggccactacagcagctcccca
cccctggacccccagaccctccgcttcctccctagctggcctcttggctccggctgtgga
tacatccaccctacagagggccccgggaggcctcacaaggccgggagcagctgcaggacg
gcaggtcaccctctggggtcccactacggccccgggtcccaccgctcctgtcacgcctac
cgctctggctgccccgcccagcgcagcaactccagttccaggctccaccacaccccctcc
tttgctccccgcgcttctgaagggggggcccacagccgggggggcgagggaggcagctgc
tctggggggagctaccggacggagcgcagtggctacctggcagacgggccggccagtgac
tccagctctggcccctgtcacggttcatccagtgactcggtgctcaactgtaccgacgtg
tccctgcagggtgtgtacggtagctggtccacgttccgcagctccttgagcagtgactat
gatccgtttgtgtactatggaccgggtttgggacggacaggccgcagggacagcatggag
gcaggggcccagagaccaaggtccctggactcagtgatgaacagagacagaggacgaggg
agccctgaggagcagccgcaggctgtgtttagccacgtccactaccaccgccacagacac
caccactatggagaggacggggagcgggagcacgcccagggacaggggccaggcaggggg
tcagaccaggagcagggggctgctgttgctattggctctggttctggttctcccccggct
ctggacaaggacttcccagtgtgccctctgaagcacagcccctgtcagtgccctaaggca
gaacacacagacagtagggaggcccactgccacgggatagagggccaggaccatgagctt
agcctcagccccccgtcaggccccctgcctgtcctggtagcaccagcacccttagtagcc
ccagtcccctgctgccaccaggaccacggccatggaggccacccccaccggagggcagac
cggctcggcggctgcgtcctcgacggcccctcggtgctcttccaccagagcctggaactg
caggacgactgtagcatccacattcactacggccagggccccagctactgctgccccccg
cctgacctgcctgtgcctgtgcctttcattctggactctgggggcatgggggccctaggg
ggcctagaggactggccctgctgtggagggccccaccatgtagtgtggcagaagcgggtg
cagcaggcccactctgagccccagttgctggggccagggctgaggggccctatggacaga
cccccacccccatgcagcaagcgccaccacggtcaccacagcccagcgcacgaccgcaac
acagacttttgtttatactgccaaacattacacaacaatcagggatcagaggaggagtcc
ggtgtgtga
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