KEGG   Salmo salar (Atlantic salmon): 106567484
Entry
106567484         CDS       T04363                                 
Name
(RefSeq) transcription factor SOX-30-like
  KO
K09271  transcription factor SOX15/30
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sasa03000]
    106567484
Transcription factors [BR:sasa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    106567484
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 106567484
NCBI-ProteinID: XP_013992232
UniProt: A0A1S3LMP3
LinkDB
Position
ssa13:50983015..50995104
AA seq 635 aa
MDRHPKRRAQMTFKKSEQSKNEDDSGPLPSKKHANESEGPASSTEWHRGDGEQKRPVGRP
KGSGRSGNSGVSGDVQVRPKVIFKADSKCGGDGELMPTSSTHLKGAVQGRPVTFEKESAS
SLASKQSKATFDYPTSQVLVIKEEIVTTAPGQAKVKVVQEPATTHHQGCRPVAPTIDFSK
PIHVVHENGMTFTVLDGKAITLSKVPYPPLVHVNVPPPPVKVKTRGMNLTMPPSEAENLE
VPQSIDRNGYVKRPMNAFMVWARIHRPALSKANPTANNADISVQLGIEWSKLTEEEKRPY
YVEARKLKDKHRQEFPGWIYQPRPGKRKCYPSVMSFAPEPSCCSAGTSGPAAESYPVTMM
TMANTTTSSCVPYTQATGSNDHGVQVAITAAPNASQTTSPVSIFFQTTACPHPHPTAPTS
GGKPAERKHEATHSASNPEEASKSRKISRQQAYYNSASEMPSTSMASSSRGLQMPLPNMA
HPHMYPPSPMPHPVGLFPTPRFPFSPPYFMPGPNFYPPGSYPYLHSPYSYPVIQPQDFSN
PMATPMATPGYPYDDNYDQHESTFSLLNRDYPFRQSGEGGQRCQGQAPTASELLGLVPPL
DVRALENVFTNSASVQEVQVTNEEDKEEVRVMRIL
NT seq 1908 nt   +upstreamnt  +downstreamnt
atggacaggcatcccaagcgaagagcgcaaatgacgttcaagaaaagtgaacaaagtaaa
aacgaagacgacagtgggcctctacctagtaagaaacatgcaaatgaaagcgagggacct
gcatcttcaactgagtggcatcgaggtgatggagaacagaaaagaccagtgggtaggcct
aaaggcagtggacgttctggaaatagtggagttagtggagatgttcaggttaggcctaaa
gttatttttaaagctgatagtaaatgtggtggtgatggagagctaatgcccacaagttca
acacacctcaagggagccgttcaaggtcgaccagttacatttgaaaaggagagcgcatca
tcattagccagtaaacagagtaaagccacatttgattatcccacatctcaagtgctggtc
atcaaggaggagatcgtcacaactgctccaggtcaggccaaggtcaaagttgtccaagaa
cctgcaacaacgcatcatcaaggatgtcgacctgtggctcccactatagacttctccaaa
ccgatccatgttgtccacgaaaatgggatgaccttcacagtattggatggtaaagccata
acgctcagcaaagttccatacccaccacttgttcatgtgaatgttccgccacccccagta
aaggtgaagactagagggatgaatctcaccatgccaccatcagaagcagaaaatcttgaa
gtaccacagagcatagacaggaatggctacgtcaagaggcctatgaatgcgttcatggtc
tgggcgagaatccacaggcctgccctgtccaaggccaacccaacggccaataacgcagac
atcagtgtgcagctaggaatagagtggagcaagctcactgaggaagagaagaggccctac
tatgttgaagcacgtaaactcaaagacaagcacagacaggagttcccaggttggatctat
cagcccagacctggaaaaagaaagtgctacccttctgtgatgtcctttgctcctgaacca
tcctgctgctctgcagggacaagtggtcctgcggctgagtcttatcccgtgaccatgatg
actatggccaatactaccaccagctcctgtgttccatacacacaggccacaggctctaat
gaccatggtgtccaggtggctataacggccgctccaaatgcctctcagactaccagccca
gtctccatattcttccagactactgcctgcccacatccccacccaacagccccaacctct
ggtggtaagcctgcagaacgcaagcatgaagccactcactctgccagcaatcctgaagaa
gcttccaaatccaggaaaatcagcaggcaacaggcctactacaattctgccagtgagatg
ccctcaacaagcatggcatccagctccagaggtctccaaatgccactccctaacatggct
caccctcacatgtatcctccatctcccatgccacatccagtgggcctcttccccacccct
cgcttccccttttctccgccctacttcatgcctggacccaatttttatccaccaggatca
tacccttacctacacagcccatactcctacccagttatccaaccccaggatttctcaaac
cccatggctactcccatggctactccgggctacccctatgatgacaactacgatcagcat
gagtccacattttcccttctcaacagagactacccgtttcggcagagtggagagggcggg
cagagatgtcaagggcaggcccccactgcctctgagctcctaggtttggtcccaccactg
gacgtacgtgccctggagaacgtcttcaccaactctgccagtgtccaggaggtccaagtc
accaatgaggaggacaaggaagaagtgcgcgtgatgagaattctctag

DBGET integrated database retrieval system