Salmo salar (Atlantic salmon): 106567492
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Entry
106567492 CDS
T04363
Name
(RefSeq) glucocorticoid receptor-like
KO
K05771
glucocorticoid receptor
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106567492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106567492
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
106567492
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
106567492
Nuclear receptors [BR:
sasa03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
106567492
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GFIT
Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
106567492
NCBI-ProteinID:
XP_013992257
UniProt:
A0A1S3LMR8
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Position
ssa13:52282306..52380981
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AA seq
781 aa
AA seq
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MDNQDKSLERGEEGSFSVNAGSSKSTTLTSVMHLPGSTPQPPASDSSNGLNVTKIQGELS
TAGTASIGLPIEEAEVKLMDKALRMQNAQKQQQNHQQLFENFALLEESISDLNRSNTPGS
SVLACSNYLFPLKTEDFSPMDKDRLDMGTVSFGQSLKDLDVNERLLGDNTLDILRDLDLP
GSLSDLNEFYLADEAAFLSSLSVDDALLGDGNMETKPIVSSSGGNCKNVNGADQQQLGPG
ISMPVIKTEKDADTSFIQLYTPGVIKQENERQSYCQISSLDIPGTHSSVGSMSGPSYHYG
ANTSTAVSVQQDQKPVFGLYPPLPSVSDSWNRGQEFGDGSGMSTPSSSSFPVSFSSPTAR
PEASSSTSSAPAKHSGPTHKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGWRARQNTD
GQHNYLCAGRNDCIIDRIRRKNCPACRFRKCLQAGMNLEARKNKKLIRFKGQQATTEPNS
PAPDERACTLIPKSMPQLVPTMLSLLKAIEPEAIYSGYDSTIPDTSTRLMTTLNRLGGQQ
VVSAVKWAKSLPGFRNLHLDDQMTLLQCSWLFLMSFGLGWRSYQQCNGGMLCFAPDLVIN
DERMKLPYMTDQCEQMLKISTEFVRLQVSYDEYLCMKVLLLLSTVPKDGLKSQAVFDEIR
MTYIKELGKAIVKREENSSQNWQRFYQLTKLLDSMQEMVGGLLQICFYTFVNKSLSVEFP
EMLAEIITNQIPKFKDGSVKPLLFHHALNHDNALKPQPPLSPARPTCFPCRRPTRSPTST
D
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggataaccaggacaagagcttagagagaggtgaagagggaagcttctcggttaacgca
ggcagttccaagtccaccacattaacttccgtgatgcatttgcctggctccacaccccag
cctccagccagcgactcctctaacggactgaatgtcactaagattcagggtgagctctcc
acagcagggacagcctccattggactccctatagaggaggctgaagtaaagttaatggac
aaggccctgagaatgcagaacgcacagaaacagcagcagaatcatcagcagctgtttgag
aactttgctctgttggaggagagcatttcagatttgaatcgatccaacaccccagggagc
tccgtacttgcatgttctaattaccttttccctctgaaaacggaagacttttcaccaatg
gataaggacaggcttgacatggggacagtcagctttggacagtcactgaaggacttggat
gtcaacgagaggctccttggtgacaatacactggacattctgcgggatttggacttgcct
ggctctctgtctgacctgaatgagttttacctggctgacgaggccgctttcctttcctcc
ctgtcagtggatgatgccctgctcggtgacggcaacatggaaaccaagcccatagtcagt
agcagtgggggaaactgtaaaaatgtgaatggcgcagatcagcagcaactgggcccaggg
atctccatgcctgtcatcaagacagagaaggatgctgacacctccttcatccagctttac
accccaggggtaatcaagcaggagaacgagcgccagagctactgtcagatatccagcctg
gacatacctggtacccacagctcggtgggctccatgagtgggccgagttaccactacggc
gcaaacacatcgacggcagtcagcgtacaacaggatcagaagcctgtctttggcctgtat
ccgccgctgccctcagtcagtgacagctggaacagaggccaggaatttggggatggatca
gggatgtcaactccatccagctcatcttttcctgtcagcttcagcagtccaacggccaga
cccgaggccagcagctccacatcttcagcccctgccaagcacagcggtccaacccataag
atctgcctggtgtgttctgacgaggcctctggctgccactatggagtcctcacctgcgga
agctgcaaggtcttcttcaagagggccgttgaaggatggagagcacgacaaaacacagat
ggacaacacaactatctgtgtgccgggaggaatgactgcatcatagacaggatccgcagg
aagaactgtccggcgtgccgcttccgcaagtgtctccaagcagggatgaacctggaagca
aggaaaaacaagaagctgatccgatttaaaggtcagcaggccacgacagagccgaacagt
cccgcacctgacgaaagggcctgcaccttgatcccaaagtccatgccccagctggtgccc
accatgctgtccctgcttaaagccatcgagccagaggccatttactctggctacgacagc
accatccccgacacctccacccgccttatgaccaccctcaacaggttgggcggacagcag
gttgtttcagccgtcaagtgggccaagtccctaccagggttccggaaccttcacctggat
gatcagatgactctgctgcagtgctcctggctgttcctcatgtcattcggcctgggctgg
cgctcctaccagcagtgtaacgggggcatgctgtgcttcgcccctgacctggttattaat
gacgagaggatgaagctgccctatatgactgaccagtgtgagcagatgctgaagatctcc
actgagtttgtgaggttgcaggtgtcctacgacgagtacctgtgtatgaaagtcctgctg
ctgctcagcacagtaccaaaggatggattgaagagccaggctgtgtttgatgagatccgc
atgacctacatcaaggagctgggtaaggccatcgtcaagcgggaagagaactccagccag
aactggcagaggttctaccaactcactaagctactggactccatgcaggagatggtgggg
ggcctcctgcagatctgcttctacacttttgtgaataaatcccttagtgtggagttccct
gagatgctggccgagatcatcaccaaccagataccaaaattcaaagatgggagtgtcaag
ccgcttctgtttcatcatgccttaaaccatgacaatgccttaaaaccccagcctcccctc
tcgccagccagacccacctgttttccctgcagacgtcccaccaggtcacctaccagtacg
gattaa
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