Salmo salar (Atlantic salmon): 106567555
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Entry
106567555 CDS
T04363
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106567555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106567555
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106567555
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106567555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
WWE_5
zf-UDP
zf_RING_Vps8_fungal
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
106567555
NCBI-ProteinID:
XP_013992489
LinkDB
All DBs
Position
ssa13:58360762..58388303
Genome browser
AA seq
618 aa
AA seq
DB search
MATASSSCVGRNVSRNGPSVSTPTSGAPGQSQPMVVVWEWQDDLGVWRPYSGQVSGYIEQ
CFSSPRGHRGGSPGSTSIWLGQSDPSLSPYLIDIPSLKQFRQDTGKTRSVRRQLFAQSSG
LGSGVYWEWVNDEGGWTPYETRTSILLEHSYQARQATADIVSHGYNYIVDLTALAQVNKA
TGYRRQVRRQGNLPYPLASGASVIHSGPACSCQQCLSHSSTGPMTSRSRHSFSSGQLSRP
SLQVPSRATGAHPTSVYSPYPRRPLSVGGMAWGGPWPLAPSASQLPGAQLAFSTSANGLS
IPAIPVQLNGSTSVSSALAGMASILMSAVGLGVRFMSAPSSAPPPPSSSSRPAGSKSRSS
VRREKRQHRTVPAQKPEDVIHRYMEEVASAQDEDCIICMDRLSCPSDYDVASEGAQSIQP
GAVGKFKCGHSLHMLCMLAMYNNGTKDGSLQCPSCKTIYGEKTGTQPKGKMEIYSISQSL
PGHPDCGTIQIIYSITHGIQGPEHPNPGQSYTSRGFPRFCFLPDNKKGRKVLELLKVAWT
RRLIFTVGTSSTTGEPDTVVWNEIHHKTEMMSNVSGHGYPDPNYLDNVLSELASQGVTDD
CLLRQEGPSQGGASNSRL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcctctagctcctgtgtggggagaaatgtgtctagaaatggaccctctgtc
tcgaccccgacctcgggagcacctggacaatcacagcctatggtcgttgtatgggaatgg
caggatgatcttggcgtctggcggccatacagtggccaggtgagcggctacatagaacaa
tgtttctcttctccgcggggacacagaggtgggagtcctggctccaccagtatctggctc
ggacaatcagatcccagtttgtcgccttatcttatagacataccaagcttgaagcagttc
cgccaagatacagggaaaacgcggtctgtacgccgtcaattgtttgcccagtcctcaggc
ttgggtagcggagtatattgggagtgggtgaatgacgaaggaggatggactccatacgag
actcgcacttctatcctactagaacacagctaccaggcacggcaggccacggcggacatt
gtctcacacggctataactacatagtggacctcacggcgctggcccaggtcaacaaggcc
acgggctaccggcggcaggtacgacggcagggtaacctcccctacccactggcatctggt
gcatccgtcatccactcgggcccggcctgctcctgccagcagtgtctgagccacagcagc
actggccccatgaccagccgctcgcgccactccttctcgtcggggcagcttagccggcct
agcctccaggtccctagcagggcgactggagctcaccccacctcagtatactcaccctac
cccaggaggcctctttctgtggggggtatggcgtggggaggcccctggccactggcaccc
tccgctagtcaactccctggagctcaactggccttctccaccagtgccaatggcttaagt
atccccgccattcctgtgcaactgaatggatccaccagtgtgagctcagccctggcaggc
atggcctccattttgatgtcagcagtgggactcggcgtgcgcttcatgagtgccccctcc
tccgctcctcctccccccagcagcagcagcaggcccgcgggctccaaaagtcgcagctcg
gttaggagggaaaagaggcagcacaggacagtcccggcccagaaaccagaggatgtcatt
caccgctacatggaggaagtggcctctgctcaagacgaggactgcatcatctgtatggac
cggctgtcttgtccgtcggattatgacgtggcgtctgagggagcccagtccatccagcct
ggcgccgtgggcaagttcaagtgtggacactccctgcacatgctctgcatgctggccatg
tacaacaatggtaccaaggatggcagcctccagtgcccctcatgcaagacaatctacggg
gagaagactgggacgcagcccaaggggaagatggagatctatagtatctcccagtccctc
cctggccaccccgactgtggaactatccagataatttacagcatcacccatgggatacag
ggtccagagcaccctaatcccgggcagtcgtacacctctagaggcttccctcgcttctgc
ttcctcccagacaacaaaaagggcagaaaggtgctggagctgctgaaggtggcttggaca
cggcgcctcatttttacggtgggaacgtccagcaccacgggcgagcccgatacggtggtg
tggaatgagatccaccacaagacggagatgatgtccaacgtgtcgggccatggctacccg
gaccccaactacctggacaacgtgctgtccgagctggcctcccagggggtgaccgacgac
tgcctcctcagacaggagggccccagccagggaggagcgtcaaactctagactgtga
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