Salmo salar (Atlantic salmon): 106567581
Help
Entry
106567581 CDS
T04363
Name
(RefSeq) protein LAP2-like
KO
K12796
erbb2-interacting protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
106567581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_LRWD1
LRR_5
LRR_NXF1-5
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
106567581
NCBI-ProteinID:
XP_013992547
UniProt:
A0A1S3LNL4
LinkDB
All DBs
Position
ssa01:134130725..134277067
Genome browser
AA seq
1377 aa
AA seq
DB search
MSSKRNLFVRLVPCRCLRGEEETVTSLDYSHCSLETVPKEIFSFEKTLEELYLDANQIEE
LPKQLFNCQMLHRLSMPDNDLTVLPAAIANLINLKELDVSKNSIQEFPENIKNCKVLAIV
EASVNPISKLPEGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSM
HKLTQLERLDLGSNEFTEVPEVLEQLTGIKELWMDGNRLTFLPGMLGALKQLSYLDVSKN
NLEMVDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLMYLPDSVGGLAA
LDELDCSFNEIEALPSSIGQCVSIRTFAADHNFLTQLPPEMGSWKSATVLFLHSNKLESL
PEEMGDMTKLKVINLSDNKLRNLPYSFTKLNQMTAMWLSENQSKPLIPLQKEEDPETHKT
VLTNYMFPQQTRTEDCIPNSDSESFNPSLWEEQRKQRAQVAFECDEDKDERETPPREGNL
KRYPTPYPDELKNMVKTAQSIAHRLKEDESGDESGKDARPNERIHVGVQDVGVKVIEAPR
ANGKPVEMEPKAPVCVQDSTVPLETSESYTSQKTSLRTSDNTKTMNHEDTLESFSLQDSE
ELSSEEEMKMAEMRPPLIEISINQPKVVALSKDKKDDGKDADSLLDETVANSNQNNSNCS
SPSRMSDSVSLTTDSSQDNSLCTPEREAKMPFLPKSRQEDENMNQQKVSTPLFQNGNGSD
TTLQALLKNQQCYESKPEKIVGDYDLSMEERLAFIKKGINNGMGDGYTKWDQINMNVAKL
PLQPDNMGVQLDDCQNGTSTKEAFHHLPPPYNNENSTAPITDHLENGNQLGDHFNGRSSE
GLAVSPMRLDSATSVVRTSSAGVTASSDMSLSCSTEELSPVAKAQSITNIETGEMKLYSL
DTEGGSYEGGVVGRMAGAVPGAQGQSIVRSKSASLLNDQPFQVYPGSSASSSDLLSSSSK
PPVSTGRYPVPTGMAMGPPPQYNVQYTSSALPKEGLWTHRTPVPPDQGYLPPPQHSLANT
NYSNRNQAPPYPHQVQQRGPPMGPKQPGDMWAKERHLPPGGQPRSSTLQRQSSSSSTASM
GDPRRMQVPEGDYMTYRDIHTLGRLPLAIAQTMQRPLSARTYSIDGPCAPRPHSARPQPH
ELPERTMSVSDFNYQHVSPSKRPHPRVKSEHSLLDGPGGPGAGGRVPVDWRDQVMRHIEA
KKMEKDDVLGPQGQQGYTMDTLRKVPLMNGQMGGPVRGQMMSCQAPMARHPSREQLIDYL
MLKVSHGQQPQGPPPPRATHDTLQQEIRVKVEKNPELGFSISGGVGGRGNPFRPEDNGIF
VTRVQPEGTVSKILQPGDKILQANGYSFVNIDHGNAVALLKTFPTTVDMIIVREVTA
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaagcggaacctgtttgtgcggctggtgccatgccgctgcctgcggggggaa
gaggagacggtgacgtcactggactactcccactgcagcctggagacagtgcctaaggag
atcttcagcttcgagaagaccctggaggagctctatctggacgccaaccagattgaggag
ctgcccaaacaactgttcaactgccagatgctccaccggctgagcatgccagacaacgac
ctcacggtgctgcccgcagccatcgccaacctcatcaatctcaaggagctggacgtcagc
aagaacagtatccaggagtttccggaaaatatcaagaactgcaaagtcctggctattgtt
gaagcaagtgtgaatcccatctccaagctcccggagggtttcactcagctcctcagcctg
acacagctctacctgaatgatgccttcctcgagttcctaccagccagctttggcaggttg
actaaactgcagatcctggagctgagggagaaccagttaaagatgttgccaaaaagcatg
cacaagctcacccagctggagagattggacttagggagtaacgagttcactgaagtgcct
gaggtattggagcagctcactggaatcaaagagttgtggatggatggaaacagactgaca
ttcctaccagggatgctaggcgctctgaagcagctgtcctaccttgacgtctccaagaac
aacctggagatggtggacgagcagatttgtggctgtgagagcctgcaggacctactgctc
tctaacaatgcactcacacagctgcccggatccataggctccctgaagaaactaaccgcc
ctaaaagtggatgagaaccagctcatgtatctgccagactccgtcggcgggctggcagcc
ctggatgagctggactgtagttttaacgagatcgaggctctgccctcctccattggacag
tgtgtcagcatacgcacttttgccgctgaccacaacttcctcacacagctgcccccagag
atgggcagctggaagagtgccactgtgctgttcctgcactccaacaagctggagtctcta
cctgaggagatgggagacatgaccaagctcaaggtcatcaatctcagcgacaacaaattg
aggaaccttccctacagcttcaccaagcttaaccagatgactgctatgtggctgtctgag
aaccagtcgaagcccctcatccctctacagaaggaggaggatccagagacccacaagacg
gttctcaccaactacatgttcccccagcagaccaggacagaggactgcatccctaactct
gacagtgagagcttcaacccctctttgtgggaggagcagaggaagcagcgggcccaggtg
gccttcgagtgtgacgaggacaaggatgagagggagacgcctccgcgggagggcaacctg
aagcgctacccgacaccgtacccagacgagctgaagaacatggtgaagacggcccagtcg
atcgctcacaggctgaaggaggatgagtcgggcgacgagtcggggaaggatgccagacct
aatgagcggatccatgtgggagtgcaggacgtgggagtcaaggtgatcgaggctccccgc
gccaatggcaagccagtagagatggagcccaaagcgcctgtctgtgtccaggactccaca
gtacccctggagacctctgaatcctacacctcccagaagacctcactccggacctcggac
aataccaagaccatgaaccacgaggacaccctggagtctttttctctgcaggattctgag
gagctttcatctgaggaggagatgaagatggcggagatgagaccgcctctcattgagatc
tccatcaaccagcccaaagtggtggcacttagtaaagacaaaaaagatgacggtaaagac
gctgactcgttgctggacgagacagtggccaacagcaatcagaacaacagcaactgttca
tccccatcacgcatgtcggactcggtgtctctgaccacggacagcagtcaggacaactcc
ctgtgcacccccgagagagaggccaagatgcccttcctacccaagagcaggcaagaggat
gagaacatgaatcagcagaaggtaagcacccctctcttccagaacggcaacggctcagac
acgaccctgcaggccctcctgaagaaccagcagtgctacgagtccaagccagagaagatt
gtgggggactacgacctgtccatggaggagaggctggccttcatcaagaagggcatcaac
aacggcatgggcgacggctacaccaagtgggaccagatcaacatgaacgtggccaagctg
ccgctgcagccggacaacatgggggtccaactggatgactgtcagaatggcacaagcacc
aaggaggcctttcaccacttgcctccgccgtataacaacgaaaactccacggcgcccatt
acagaccacttggagaacggcaaccagctgggcgaccactttaacggccgctccagcgag
ggattggccgtgtcacccatgaggttagactctgccacgtcggtggtgcggacgtcttcg
gcgggcgtgacggccagcagtgacatgtcgctgtcttgcagcacagaggagctgtccccg
gtggccaaggctcagagcatcaccaacatcgagacaggggagatgaagctgtactccttg
gacactgaggggggctcctacgagggtggcgtagtgggcaggatggccggagccgtaccg
ggggcccagggtcaaagcatcgtccgcagcaagtcagcctccctgctcaacgaccagccc
ttccaggtctaccccggctcctcagcctcttcctccgacctgctctccagctcctcaaag
cctcctgtcagcaccggccgctaccccgtccccacaggcatggccatgggcccaccgccc
cagtacaacgtccagtacaccagcagcgccttgcccaaagaaggcctgtggacccatagg
acccccgtcccccccgaccagggctacctccctccaccccagcactctctggccaacacc
aactactccaaccgcaaccaggcccctccatatccccaccaggtccagcagagaggcccg
cccatggggcccaagcagcccggtgacatgtgggctaaggagagacacctgccccccggt
ggtcagccacggagcagcaccctgcagaggcagagcagcagctcctccacagcctctatg
ggggacccccggcgcatgcaggtgcccgagggcgactacatgacgtacagggacatccac
accctgggccggttgccgctggccatagcccagaccatgcagaggcctctgtcggcccgc
acttacagcatagatgggccctgtgcccccaggcctcacagcgccaggccacagcctcac
gagctgcccgagaggaccatgtcggtcagcgacttcaactaccagcacgtcagccccagt
aaaaggccccaccccagggtgaagtctgagcactcgctgttggacgggccaggaggaccg
ggagcaggaggaagggtaccagtggattggagagaccaggtgatgcgccacatcgaggcc
aagaagatggaaaaggatgacgtgttaggtcctcaaggacaacagggctacaccatggac
accctccgaaaagtgcctttgatgaatggtcagatgggcggtccagtgcgaggccagatg
atgtcgtgccaggcgcccatggcccgccacccctccagagagcagctcatcgactacctg
atgcttaaggtctcccatggccagcagccccagggaccccctccgccacgggccactcac
gacacactgcagcaggagatccgtgtgaaagtggagaagaaccctgagctagggttcagt
atatcaggaggagtgggaggacggggaaacccctttcgtccggaagataatggcatcttt
gtgacgagggtccagcctgagggaactgtctcaaagatcctccagcctggagacaagatc
ctccaggcgaacggatacagctttgtgaacattgaccacgggaacgccgtagccctgctg
aagacgtttcccaccactgtggatatgatcattgtccgagaggtgacagcgtag
DBGET
integrated database retrieval system