Salmo salar (Atlantic salmon): 106567608
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Entry
106567608 CDS
T04363
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
106567608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sasa02000
]
106567608
Transporters [BR:
sasa02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
106567608
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GFIT
Motif
Pfam:
SNF
DUF373
Motif
Other DBs
NCBI-GeneID:
106567608
NCBI-ProteinID:
XP_013992591
UniProt:
A0A1S3LNY6
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Position
ssa13:54335474..54353598
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AA seq
599 aa
AA seq
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MMPSTANGQAKLKELEARGNWESKAEYILTVMGAIIGPGNVWRFPYLCYKNGGGVFFIPY
VLFLVTCGIPLFFLETSLGQYTSQGGITCWRKICPLFEGMGYACNLVISFGAISYIVILA
WAFFYLFSSFSAELPWASCGNWWNTDSCMDNSKQNHSTNLTSRQNATLPVMEFWERRVLN
ISGGIEEMGSIRWELALCLLLTWVICYFCVWKGIKSTGKAAYFTATFPYAMLLILLIRGV
TLPGAIDGILFYIYPDISRLTDPQVWMDAGTQIFFSYAISLGFLTSLGSYNGYNNDCYKD
CFYLCLLNSGTSIVSGFAIFSVLGFMTYEQGVSIEEVAESGPGLAFIVYPRAVAMMPMPQ
IWSACFFIMIILLGLDSQFVGLECLMTSVVDLFPTFLRREFRRELLLLAICTICFILGLA
LVTEGGMYLLQLLDHHVCSGTTLLLLAICQSVCIAWVYGAERFYGNISDMIGYRPLPLMK
YCWLYITPTVCTATFIFSIVKYSPLKFSNTYVYPVWANIIGWFVATISLSFIPLWMVYKM
ANGNGTLHQRFSVLCRPVDDLPVNHTCRTVPLYLATSDVMSSNMELKPLSFTVGDENAL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccagcacagccaatggccaagcaaaactaaaggagctggaagcgaggggaaac
tgggagagtaaagccgagtatattttaacggtgatgggagctataattggacctggaaac
gtgtggagattcccttacttgtgttacaaaaacggagggggtgtgttcttcattccatat
gttttgttcttggtgacgtgcgggatcccgctattcttcctggagacttctctgggacaa
tacaccagccagggaggaataacatgttggagaaagatttgtccgctatttgagggtatg
ggctacgcctgtaaccttgtcatctcattcggtgccatctcctacattgtgatcttggca
tgggcctttttctatctcttctcctccttcagtgcagagctaccctgggcaagctgcgga
aactggtggaacactgactcatgcatggacaacagcaagcagaatcacagcactaacctg
acatcaagacagaatgccacactgccagtcatggagttttgggagcgcagggtgctgaac
atttctggggggatcgaggagatgggcagcattagatgggagctggcgctgtgtctcctt
ctcacctgggtcatctgttacttctgtgtctggaagggaattaagtccacaggcaaggct
gcttactttacggccacattcccatatgccatgctcctgatcctgctgattcgcggtgtc
actctgcctggggccatagacggcatcctgttttacatttaccctgacatctctcgcctc
acagacccacaggtgtggatggatgcaggcacacagattttcttctcctatgctatcagc
ttgggctttctcacatccctgggcagctacaacggttacaacaacgactgctacaaggac
tgtttttacctgtgtcttctaaacagtggcaccagcattgtgtcaggctttgcaatcttc
tctgttttgggcttcatgacctatgaacagggggtgtccattgaagaggtggctgagtca
ggtcctgggctggcatttattgtgtatcctcgagcagtagccatgatgcccatgcctcag
atctggtctgcctgtttcttcatcatgatcatccttctgggtctggatagccagtttgtt
gggctggagtgtttgatgacatctgttgtggatctgttccctacctttctgcgccgtgag
ttcaggagagagctgctgttgctggctatctgcacaatatgcttcatactgggacttgcc
ctggtcacagagggagggatgtacctgctccagctgctagaccaccatgtgtgcagtggg
accaccctgctactgctggccatttgccagtctgtctgcattgcctgggtctatggtgct
gaacgtttctatggtaacatcagtgatatgattggctacagacctctgcctttgatgaag
tactgctggctctacatcactccgacagtgtgcacagctaccttcatcttctccatagtc
aagtactcaccattgaagttcagcaacacatatgtttatcctgtctgggctaacatcatt
ggctggttcgttgccactatctccctctccttcatcccgctatggatggtctacaaaatg
gccaacggcaatggaaccctgcaccagcggttttctgtgctctgtcggcctgtagacgac
ctccccgtgaaccacacatgcagaacagtccctctttatctggcgacctctgacgtcatg
agctccaacatggagctgaagcctctctccttcacagtgggggatgagaacgcactgtga
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