Salmo salar (Atlantic salmon): 106567642
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Entry
106567642 CDS
T04363
Name
(RefSeq) cytotoxic and regulatory T-cell molecule-like
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106567642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106567642
04090 CD molecules [BR:
sasa04090
]
106567642
Cell adhesion molecules [BR:
sasa04515
]
Immunoglobulin superfamily
Nectin family
106567642
CD molecules [BR:
sasa04090
]
Proteins
106567642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
V-set
C2-set_2
Ig_2
C2-set_3
Orf78
DUF4064
Tmemb_9
DUF6476
Motif
Other DBs
NCBI-GeneID:
106567642
NCBI-ProteinID:
XP_013992648
UniProt:
A0A1S3LNU2
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Position
ssa13:62917327..62930566
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AA seq
438 aa
AA seq
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MALKLQLCFLVLFVRGSIAVQHLTVMEGETLTMKCRIRNAEGSHVEWKNPDGHVMFFNNQ
KALKDKRYKIINLSESVFSVSVSDVTFKDGGLYTCLHYIHKVPVVKWVNVTVLGKPKLEI
TEHNGKTAIKCSAVGNGHPPKISWLFESGLEMYAQPQSQYLLDKNTYSSLDILHVQSYKR
RVTLKCIVRHPALHNSSLMNFVKIGQNPTEESHSTTRVSHWLSTGLTEVPTTTTVSRWHS
TQGSTETPTATALDWPNTEGSPASTPDLQLRTHNWSSVSQTTENTPHNGTGHNSSNAKGS
FFNDTETQKGTGGSALLLIFLVTCLILGLLVVVSLFVIKLRRAHILWKKVLIITENEDSD
QSVESNKSKSSNEEKQSRGRRGNGLFNIRFTKYVVEEPMATETMTTTTNTKTEEDPEIQV
IPQTNGATQSPQIKEREL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcactaaagctgcagctttgcttcctagtcttgtttgtaaggggatccattgcagtg
caacatttgaccgtgatggagggtgagacactaaccatgaagtgtcgcattagaaatgcc
gaagggagccacgtggaatggaagaatcctgatgggcatgttatgttttttaataaccag
aaggccctgaaggacaagcgctacaagataataaacttgtctgagtccgttttttcagtc
agtgtgtctgatgtcaccttcaaagatggaggcctctacacatgtttacattacattcac
aaagtgcctgtagtgaagtgggttaatgtgacagttttaggtaagccaaaattggagata
acagaacacaatggaaagactgccataaaatgttctgcagtgggaaatggccatcctccc
aaaatctcatggctgtttgagagtgggttagaaatgtatgctcagcctcagtcccagtat
ctgttggacaaaaacacatattcctccctggatatcttgcatgttcagtcctacaagagg
agagtcacattgaaatgcattgttcgccatccagccttacacaattcatccctgatgaat
tttgtgaaaattggacagaatcccactgaggaatcacactccactacgagagtctctcat
tggctcagtacaggtctaacagaggtaccaacaacaacaacagtctcccgttggcatagt
acacaggggtcaacagaaacaccaacagctacagccttagattggcccaatacagaggga
tcaccagcatcaacccctgacttacaactcaggactcacaattggtcgtcagtgtcccag
acaacagagaacacacctcataatggcacaggacacaactccagcaatgctaaaggaagt
ttcttcaatgatacggagacgcagaaaggaactggaggaagtgcgctgttgctcatcttc
cttgtgacatgcctcatccttggtctgcttgtggttgtttcgctcttcgtgatcaagctg
aggagggctcacatactctggaagaaagttttgatcattacagaaaatgaagactcggat
caatctgtggaaagcaacaaatcaaaatcaagcaatgaggaaaaacaatctcgaggaaga
aggggcaacggactctttaacatcagattcacaaagtatgtcgttgaggaacccatggca
acagagacgatgacaacaacaacaaacaccaaaacagaagaggatcctgaaattcaagtc
atcccacagacaaatggagcaacccaaagccctcagatcaaggagagggaactgtaa
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