Salmo salar (Atlantic salmon): 106567670
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Entry
106567670 CDS
T04363
Symbol
RPB11
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03020
RNA polymerase
sasa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106567670 (RPB11)
09124 Replication and repair
03420 Nucleotide excision repair
106567670 (RPB11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106567670 (RPB11)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106567670 (RPB11)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106567670 (RPB11)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106567670 (RPB11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
106567670
NCBI-ProteinID:
XP_013992702
UniProt:
B5XEX2
LinkDB
All DBs
Position
ssa13:69334967..69337240
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITIIKDTKVPNACLFTLNKEDHTLGNIIRQQLLKDPQVLFAG
YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccaccggcattcgagtcatttctgttgtttgaaggggaaaagaaaatcaca
atcatcaaggacacaaaagtccctaacgcctgcctcttcacgttgaacaaagaggatcac
acgcttggtaacatcatcagacaacaacttctgaaagacccccaagtgctatttgctggc
tacaaggtccctcatcctctggagcacaagattgtgatccgtgttcagaccacaccagac
tatagtcctcaggaggctttcactaatgccatcactgacctcatcagcgagctgtccttg
ttggaggagagattcagggttgcaattaaagacaagcaagaaggaattgaataa
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