Salmo salar (Atlantic salmon): 106567810
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Entry
106567810 CDS
T04363
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106567810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106567810
03036 Chromosome and associated proteins [BR:
sasa03036
]
106567810
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
106567810
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
106567810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
ATRX_C
Helicase_C
C5HCH
Vps8_C_schizo
Motif
Other DBs
NCBI-GeneID:
106567810
NCBI-ProteinID:
XP_013993043
UniProt:
A0A1S3LPX2
LinkDB
All DBs
Position
ssa13:complement(80173007..80210024)
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AA seq
1984 aa
AA seq
DB search
MSSEMLSVPPGTSKLDVLVTKLHEFLAHAPEDDEDRLVTESPDGMTNKDCVEPHSTDRTP
LEPQQTSTDTLKQSGCGSRRKPSVVIKHSGLDESGASNESDDDDDGLIINSNGYPDVSRL
PKGTVLVRPEPVENVRDDFRGPEFRCGKSGNLKRAFSRRRGGGEHLEIVSCTACGQQVNH
FQRDSFYQHPVLKVLICKSCFKYYSSDDISKDCDGMDEQCRWCAEGGNLICCDFCPNAFC
KKCILRNLGRKELSGILDEESKWYCYVCSPEPLLDLVVACDNVLDNLGHLWPDHRKRGRG
EGKSGHYDSHPRHSQNIPVGHWNHSGMDGHVVFNYNTLQIPEEMAKKAKNLVDSTNTVNT
TFVKFIQGGMQQKQTTELKLQYLKTFQSVLKGLKKSQTALEEALLEEFREMGLPNGGENP
TFDDTDVPQQEQEGCVEIDISDKNGLHYLKKIAAEHLEENDSDSNGFMDDGRPSSSIEMK
GVLGTEIIPRRGRGRPRKNSKPGEDACNVTKQLVVQISPAPVEQEPLSGPSELEVEVELE
AEEEEEEGKEKVEEREGDCESIELVTEGEYESAEGSESLELEEEPDNRRSPRVKTTPLRR
PGEGKTQPTPSGADSESDSDPDTSPNAEVPQGADEGGLGRGTDDSDSDEVPAVLQRAAMT
RSSDEAESDDGDHRSVTKKCLFGLKKNTPLSPERVVRKRKVPDRSSDSDSSSDDPDLQKE
IKTMTRPRGRPRKVKREDEPTPSKDSPQHRPRGRPRKVKKEDESTSSKEGNTQAAKPQST
PQSEHRTKQTPSSSSQEEGDLDSESSDDSGDQKIKPITEEVALLGAAAFHQSSGDEEHPQ
SGPSWAAEDDDDPENRIAKKMLLAQIKANYSSGEDFSSDVESSHDDESDREEKEQEDGKD
ESSDENGETSSLTSDSESSKTRHRHRLLRHKLSLDNGNPSDQKTAEENGIEQKVRKSRRT
KGEKLDSQSSDDDSQSQQEESGMSEELSQSENEGNEQMLKSSTSSSSRVERESVRSYLQK
KQQPSYIVLSDSSVDKSDDEEKDGEEGDNKGTPKGRKKIRRIIVDEHLRSETQRALKEEE
ERRRRLAEREQREDFREVIVIEDEASHVTCPITTKLVLDQDEGTNEPLIQVHRNLVTRLK
PHQVDGVQFIWDCCCESVKKANSTPGSGCLLAHCMGLGKTLQVVTFLHTMLQSKCMNFRT
ALVVCPLNTILNWVNEFEKWQVDMGADKVKVTELATLKRPQERYIALQRWQMDGGVMIMG
YEMYRNLTLGLKVIHGKFKKTFDSTLVNPGPDFVICDEGHILKNEASNISKAMSAIKTKR
RVVLTGTPLQNNLNEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTPRDVRIMKN
RAHVLHAMLAGCVQRRDYSALTKFLPPKHEYVMAVRVTPLQYRLYRYYLDNFTGARSVVE
GARGKAGTSLFKDFQILSRIWNHPWCLQLSYISKENKGHFDGKHQEKPERKEKENKGKVV
NADEDSKDVVILVWNSTSKGVNVEGDQQAGPLVPVVKALRASTSFRPDSPAADWYKSMLS
DSDATILGHSGKMVLLFEILRMAEELEDKVLVFSQSLITLDMIEDFLDLTNKAKNNRQSS
LYKGDGSWIRNTDYYRIDGSTSATSRMKWVQEFNDATNERGRLFLISTRAGSLGINLVAA
NRVIIFDASWNPSYDIQSIFRVYRFGQLKAVFVYRFLAQGTMEEKIYDRQVAKQSLSFRV
VDQQQIQRHFTLFELTELYMFEPDLLDDPNSEKKSKRTTPLLPKDMVLAELLQSCKGQIV
CYHEHESLLDHKEEEELSEADRKTAWAEYEAEGAFFLNKAEHSNTNVPSPSTSTMAVSLS
SLYKKTNGQLKNMIYSSCEKVNEAIKSLHSLLNLSLDDYVLRLSQDNPSLDEKQVRALAQ
TWKTSNDRERERRQALHHDLLAKQQSLTMCIQTILASRNTEITHTAMVTNHTPALTDSAN
KPTQ
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagagatgctcagcgttccacctggcacgagcaagctcgatgtgttggtgacc
aaactgcatgaattcttggctcatgctccagaggatgatgaggacagactggtaacagaa
agtcctgatggtatgacaaacaaggactgtgtggagccacactcaacagaccgaacccct
cttgagcctcaacagacctcgacagacaccttgaagcagtctggatgtggttccaggaga
aaaccttcagttgtaattaaacacagtggactggatgaatctggtgcttcaaatgaaagt
gatgatgatgatgatggcttgatcatcaattcaaatggttatcctgatgtatcaaggtta
cctaaaggcactgtactggtgaggcctgagccagtggaaaatgtcagagatgacttcaga
ggtcccgaattccgttgcggaaaatctggaaatctgaagagagctttttctaggagacgt
ggaggtggtgaacacttggagattgttagctgtacagcctgtggccagcaagttaaccac
ttccagagggactccttctatcaacatccagtactcaaagtacttatttgcaagtcttgt
ttcaagtattactcaagtgatgacatcagcaaggattgtgatggcatggatgaacagtgc
agatggtgtgcagaggggggaaacctgatctgctgcgacttttgccccaatgccttctgt
aagaaatgcattttgcggaacctggggcgaaaagagttgtctggcatcctggatgaggag
agtaagtggtactgctacgtatgcagcccagagcctcttctggacctggtcgtcgcttgt
gacaacgtccttgacaacttggggcatttgtggccagaccaccgcaagaggggcagaggc
gagggaaaatctggacattatgactcccatccaaggcattctcaaaacattcccgtgggt
cattggaaccatagtggcatggatggtcacgttgtgttcaactacaacacccttcaaatt
ccagaggagatggccaaaaaggctaaaaacctggtggactcaacaaacaccgtaaacaca
acttttgtgaagttcattcaaggtggcatgcagcagaaacagacaactgagttaaagcta
caatacctgaagactttccagtcagtactgaagggtctgaagaagtctcagacagctctg
gaggaagcccttttggaggagttcagagaaatgggtttgccaaatggtggcgaaaacccc
acgtttgatgatactgatgtacctcaacaagaacaagagggttgtgtggaaattgacatt
tcggataagaatggccttcattacttaaagaaaattgcagctgaacatttggaagagaat
gattcagactcaaatggctttatggatgatggaaggccttcgtcctcaattgaaatgaaa
ggtgtccttggcacagagataattcccagacgaggtagaggcaggccgcggaaaaactca
aagcctggagaagatgcttgcaacgtgacaaaacaactggtggtgcaaatttcacctgcc
cctgttgaacaagagccactctctggcccctcagagttggaggtggaagtggagttggag
gcagaggaggaagaggaagagggaaaagaaaaagtggaggaacgggagggagactgtgaa
tctattgaacttgtaactgagggggagtatgaatctgctgagggaagtgaatctctggag
ctggaagaggaaccagataatagacgctcacctcgggtaaagaccactcccttgcgcagg
ccaggtgagggcaagacccagcctaccccctcgggtgcggacagtgagagtgactcggac
cctgacaccagccccaatgctgaagtgcctcaaggagctgacgagggagggcttgggaga
ggaactgatgactctgactccgatgaggtcccagctgtcctccagcgggccgccatgacg
cgcagttcagacgaagccgagagtgacgatggagaccatcggagtgtgaccaagaaatgc
ctcttcggcctgaagaagaacacgcccctctctccagaaagagttgtccgcaaacgcaag
gtgccagaccgctcctctgactctgattcctccagtgacgatccggacttgcagaaggag
atcaaaactatgaccaggcccagggggaggcctcggaaggttaagagagaggatgaacct
acccccagcaaggacagtccgcaacataggcccaggggcagacctcggaaggtcaagaaa
gaggatgaatctacatccagcaaggagggtaatacccaggcagccaagcctcaaagcaca
cctcaatccgagcatagaacgaagcagacgccatcctcttccagtcaagaagagggggac
ctggactctgagtctagcgatgacagtggtgaccagaagatcaagcctatcactgaggag
gtggccttactgggggcagcagctttccaccagtcgtccggcgatgaagagcatccccag
tctgggccttcttgggcagcagaagatgatgacgatccagaaaatagaatcgctaagaaa
atgctcttggcccaaatcaaagccaactactcatcgggggaggatttctcttcagacgtg
gagtcatcacatgatgatgaatctgacagggaagagaaggagcaagaagatgggaaagat
gaaagctccgatgagaatggggagacctccagtttgacctctgactctgagtccagtaaa
acacgtcacagacatcgtctgctacgccacaagctcagccttgacaatggaaatccaagt
gatcagaaaaccgctgaagaaaatgggattgagcagaaagtcaggaagtctagaagaacc
aaaggtgagaaattggatagccagagtagtgatgatgatagccaatcacagcaggaagag
tctggtatgagtgaagagctgagccaatcggagaacgagggcaatgaacagatgctcaaa
agctctacatcatctagctctagagtcgagagggaatcagtccgtagttatctacagaag
aagcagcaaccctcgtatattgtgctgtctgactccagtgtcgataagagtgacgatgaa
gagaaggacggcgaggaaggggacaacaaaggtacacctaagggccgcaagaagatccgc
aggatcatcgtagacgagcaccttcgctcggagacccagagagccctgaaggaggaggag
gagagacgcagacgcctggcagaaagagagcagagggaggacttcagagaggtgattgtt
attgaggatgaggcgtctcatgtgacctgtcccatcaccactaagctggtcctggatcag
gatgaggggacaaatgagccactcatccaggtgcacaggaacctggtgaccaggctcaag
cctcaccaggtggatggtgtgcagtttatctgggactgttgttgtgagtctgtgaagaag
gccaattcaacccctggatcaggctgcttactggcccactgcatgggcctagggaagaca
ctgcaggtggtgacatttctccatacgatgctgcagtcaaagtgcatgaacttcaggact
gccctggtggtgtgtccactcaacacaatcctcaactgggtcaacgagtttgagaagtgg
caagttgacatgggagctgacaaagtcaaggtgacagagttggccacactgaagcgacca
caggagcgttatattgccctgcagagatggcagatggatggtggtgttatgatcatgggc
tatgagatgtaccgtaacctcacactaggcctcaaagtcatccacggaaaattcaaaaag
acctttgacagtactctggtcaatccaggtccagactttgtgatctgcgatgagggtcac
atcctgaagaacgaggcatccaacatctctaaagctatgagtgccattaagaccaaaagg
agggtggtactgacaggcacaccactgcagaacaacctcaatgagtaccactgcatggtc
aacttcatcaaggaaaaccttctgggctcaatcaaggagttccggaatcgctttatcaac
cccattcaaaacggccagtgtgcagactccaccccaagagacgtccgcatcatgaagaat
cgcgcccatgtccttcatgcaatgttggcgggatgtgtacagagaagagactactcagcc
ttgaccaagttcctgccccctaaacatgaatatgttatggcagtgagggtgacccctctc
cagtacagactgtatcgctactacctggacaacttcactggagctaggtctgtggttgag
ggagccaggggcaaagccggaaccagccttttcaaggacttccagatactcagccgaatc
tggaaccatccctggtgtctgcagctcagttatatcagcaaagaaaataagggccatttt
gatgggaagcaccaggagaaacctgagaggaaagagaaggagaacaaggggaaagtggtg
aatgctgatgaagacagcaaggatgtggtgatcctggtgtggaacagcacatcaaagggt
gtcaatgtggaaggagaccagcaagcaggtccactggttccagtggtaaaagcgttgaga
gcgtccaccagtttcaggcctgacagtccggctgcagactggtacaagtcaatgctgagt
gactctgacgccaccatcctgggacactcagggaagatggtgctgctgtttgagattctc
agaatggcagaggaactggaagacaaagtgttggtgttcagtcaatccttgatcacatta
gacatgattgaagatttcttggacctcaccaacaaagccaaaaacaacaggcaatcatcc
ctatacaaaggtgatggcagctggatcagaaacactgactattaccgtattgacgggtcc
accagcgccacatccaggatgaaatgggtgcaagagttcaatgatgccaccaacgagcgg
ggtcgtctgtttctcatctcaacaagagctgggtcccttgggatcaacctggtagcagct
aacagggtcatcatttttgatgcttcatggaatccctcctatgacatccagagcatcttc
agggtgtaccgttttggccagctgaaggctgtgtttgtctaccgtttcttggctcagggc
accatggaggaaaagatctacgaccggcaggtggccaagcaatcactgtcattccgggtg
gtggaccagcagcagatacagagacacttcacactgtttgaactgacggagctctacatg
tttgagccagacctgctggatgaccccaactctgagaagaaaagcaagaggaccacaccc
ctgctgcccaaggacatggtgctggcagagctgctgcagagctgtaaggggcagattgtc
tgctaccatgaacacgagtccctgctggaccacaaagaggaggaggagctcagtgaggct
gaccgcaaaactgcctgggctgagtacgaggcagagggtgctttcttcttgaacaaagca
gaacacagcaacaccaacgttcccagcccctccacctccactatggctgtcagtctgtca
tccctgtacaagaaaactaatgggcagctgaagaacatgatttattctagctgtgagaag
gtcaacgaggccatcaagtccctgcattccttactgaacctctccctggatgactatgtg
ttgcgcttgtcgcaagataacccaagtctagatgagaagcaggtgagagccctggcccag
acctggaaaaccagcaatgacagggagcgggaacgacgacaggccttacatcacgacctt
ctcgcaaaacaacaatcacttacaatgtgcatccagaccattttggccagtagaaacacc
gaaattacccatactgccatggtcaccaatcacacaccagctctgacagattccgccaat
aaacctacacagtga
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integrated database retrieval system
