Salmo salar (Atlantic salmon): 106567845
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Entry
106567845 CDS
T04363
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106567845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106567845
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
106567845
Endosome - Golgi transport
Arf GTPase associated proteins
106567845
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
106567845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
PH_11
PH_6
PH_3
RA
SOS1_NGEF_PH
Ras_bdg_2
DUF3444
GAP1-M
Motif
Other DBs
NCBI-GeneID:
106567845
NCBI-ProteinID:
XP_013993123
UniProt:
A0A1S3LQ68
LinkDB
All DBs
Position
ssa13:79075195..79089035
Genome browser
AA seq
1141 aa
AA seq
DB search
MNQLFVSDVMADQEDSLRAMQNCFRSQFSVEEVECEDIEASRRTSSVDEDSIDLACTLSR
SYDLGDSDLHHTPVIKMGWLDKTPPQGSLIFQKRWVMLDAQYLRYFQNEKEVYSKRIIDI
LSVTEVLNVGEQKFEVVTRNRTFLFRAENNTVREEWVSVLKETIQQRRSSMEMSLMNFSF
TSGQHDSGVSLISKQGYLEMNGLRSKVYVVICADRVFLYGNAEEHSQGVGITYIEMNLGT
VKSTDKRSFNLTTFYRTFSFLAESAQQRDQWVEALQDCVSRSLSSDVVAQKIWSVEANQR
CADCGAPHPDWASVNLCVVLCKCCAGVHRGLGQSVSKVRSLRMDEKVWTDNLIQVFLLGN
NMVNLFWAANMPPSEALHPSSDSEKRQRFVSAKYCQGKYRRYHALFGQQEALNKALCSTV
QTDDVLETLSLVFCGADVNCYTGDPERPSPVSMAQHYGQILQVEFLTHNHNTELPGSRAG
DRTLLEAALPVSHTGYLFKTASSIRPVTEGKAKGDFSRRWCSLNQGNFSYYESEKSSSQS
GGMKMSDVLCLLVNPPGKHGYAHSFELYHDSGRVYLFGEDSSDKVKGWIKAIAKALVPSA
AEDLVCWPFERVGRFRYTEGQSHHSPLLGWFSLGGSRLLLLLHGADRVENIDLRKIKELS
MEQEAGAGAVVLVDGGRSLRVEGDRRPDFQGWLSGLQQGSGRGDGPLDKQQLTDRDVPVI
VDRCMSFITQHGLKSEGIYRRCGVNSKIAALLFFLRHDPRKVRLSEGERQVDDVANVLKR
FLREVGEGVFNGHQASLPWLHTTTISEMSERVSQYQALLHSLPRVNRATLGAVINHLYCV
QCFADENQMNMHNLAIVFGPTLFQMDGTDNSAGQVVEDLIQNYQDIFNVDAEQFQRQLDM
ISHVIKAQKEHTEEGSPSPLTICGVYLERKEEGSELLVQISQEVSAEELVCKVLRRRNIH
PQQGDYWSCFLVDSNQEIERPLHYQEQVLTIYFSLGKDCHLVVKKNCYMEAILTNIAGRV
DVSRNGLIKFCEEKGQRGKGTFSRRLCVLSGLSLRLYKEVKSSQPERECSVHALKVYCGI
KRKLQPPSCWGMTVVCEKAVRVIQKWYLCCESKNELIEWLATFMSLQHDGDLWPAASRLD
S
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagttattcgtctcagatgtcatggcagaccaggaggactcattgcgagccatg
cagaactgcttccgcagtcagtttagtgtggaggaggttgagtgtgaggacattgaagca
agcaggagaacatcatcggttgatgaagacagtatcgatcttgcctgcacactgtcacga
tcatacgacctcggagactctgatcttcaccacactcctgttatcaagatgggctggctg
gacaagaccccacctcaggggagccttattttccagaagcgttgggtgatgttggatgca
cagtacctgcgatactttcaaaatgagaaggaggtctactcaaagcggatcatagacata
ctgtctgtcactgaagtgcttaacgttggagagcagaagtttgaggtggtgacaaggaac
aggactttcttgttccgtgctgaaaacaacactgtcagggaggaatgggtgtcagtactg
aaagaaactattcagcagcgccgtagcagcatggagatgtcccttatgaacttcagtttt
actagtggtcagcatgatagtggagtctctctcattagtaaacaaggatacctggagatg
aatggactgcgctccaaggtctatgtagtcatctgtgcagacagggtcttcctctacggg
aacgctgaggagcacagccagggtgttggcatcacctacattgagatgaatctgggtact
gtgaagagcacagacaaacggtccttcaacctcaccaccttctacagaacattcagtttt
ctggccgagtcggcgcagcagagggatcagtgggtggaggccctgcaggactgtgtcagt
cgctctctgtccagcgatgtggtggcccagaagatctggtctgtggaggccaaccagcgc
tgtgcagactgtggcgccccccatccagactgggcctctgtcaacctctgtgtggtcctt
tgcaagtgctgtgcaggcgtgcacaggggtctgggccagagtgtgtccaaagttcgcagt
ctgagaatggatgaaaaggtgtggactgataaccttattcaggtgttcctgttaggtaac
aacatggtaaacctattctgggcagctaacatgccaccaagcgaggcactccacccatca
agtgatagtgagaagcgccagcgctttgtctctgctaagtattgtcaggggaaataccgc
cgctaccatgctctgtttggccaacaggaggccctcaacaaagctctgtgcagtactgtt
cagacggatgatgtattggagactctgtctctggtgttctgtggagcagatgtgaactgt
tatacaggtgatccagagcggcccagccctgtgtccatggcccaacactatggacagata
ctacaggtggagttcttaactcacaaccacaacacagagctgccagggtctagggctgga
gatcgcacactcctagaggctgctctccccgtctcacacactggttatctcttcaagacc
gcttcctcaatacggccagtaacagagggcaaagcaaaaggagattttagtcgtcgatgg
tgctctctgaaccaaggtaacttcagctactatgagagtgagaagagctccagtcagagc
ggcggaatgaagatgagtgatgtcctgtgtctgttggtcaatcccccagggaaacatggt
tatgcccattcctttgagctgtaccatgactctgggagagtctatctatttggagaagac
tcctctgacaaagtgaaagggtggatcaaggccatcgccaaggcgctggtcccctctgca
gcagaggacctggtgtgctggccctttgagagggtgggccggtttcgctacactgagggc
cagagccaccatagccccctcctgggctggttctccctggggggctccagactgctccta
ctcctccacggagcagatcgagtggagaacatcgacctgcgcaaaataaaggagctctcc
atggagcaggaggctggtgctggtgctgtggtgctggtggatggaggcaggagcctgcgt
gtggagggggacaggaggcctgacttccagggctggctgagtgggctccaacagggctca
gggagaggagacggccccctggacaagcagcagctcactgacagagacgtccctgtcatc
gtggaccgctgcatgagcttcatcacacagcatggtttgaagtcagagggcatctatcgg
aggtgtggtgtgaactccaagatcgccgccctgttgttctttctccgccatgacccccgg
aaggtccgtctgagtgaaggggagcgccaggtggatgacgtggcaaacgttctgaagagg
ttcctcagggaagtgggagagggggttttcaatggccatcaggcctctctgccatggctc
cacaccactactatcagtgagatgagtgagagagtgtcccagtaccaggccctcctccac
agcctcccccgagtcaacagagccactctgggggctgtcatcaaccacctctactgcgtc
cagtgctttgcagatgagaatcagatgaacatgcacaacctggccattgtgtttggtccc
acgctcttccagatggacggcactgataacagcgcaggacaggtggtagaggatctcatc
cagaactaccaggacatcttcaatgtggatgcagagcagtttcagaggcagctagacatg
atctcgcatgtcatcaaagcacagaaggaacacaccgaggagggaagcccctcacctctc
accatctgtggggtttacctggagaggaaggaggagggctctgagctgctggttcagatc
tcccaggaagtgagtgctgaggagctggtatgtaaggtcctgagacgcaggaacatccat
ccacagcagggggactactggagttgcttcctggtcgacagcaaccaggagatagagcgt
ccactgcactatcaggagcaagtgttgactatctatttctctctgggtaaagactgtcat
ctggtggtcaagaagaactgttacatggaggccattcttaccaacatagcaggcagggta
gatgtgtcccgaaacggcctgatcaaattctgtgaagaaaaaggtcaaaggggtaaggga
accttcagcagacgcctctgtgtgctcagtggcttgtctctaaggctgtacaaagaagtg
aagagttctcagcctgagagggagtgttcagtccatgctctgaaggtctactgtggtatc
aagaggaagttacagccaccgtcatgctgggggatgactgtggtgtgtgagaaggcagta
cgagtcatacagaaatggtacctgtgctgtgaatcaaagaacgagctgatcgagtggctg
gccacttttatgagcctccagcatgatggtgatctgtggccagcagcttccaggctagat
tcctga
DBGET
integrated database retrieval system
