Salmo salar (Atlantic salmon): 106567847
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Entry
106567847 CDS
T04363
Name
(RefSeq) cohesin subunit SA-2-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106567847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106567847
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106567847
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
106567847
NCBI-ProteinID:
XP_013993126
UniProt:
A0A1S3LQ73
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Position
ssa13:complement(79011472..79025821)
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AA seq
1272 aa
AA seq
DB search
MIAAQELHTEFQFPQETDTQLSSDTDVEDPDVKNAKLGKGKGGRKGKKAPGEKGKGGGAK
GTGLGGVNGHHQENGMESMTLFEVVKMGKSATQSIVDDWIESYKNDRDIALLDLINFFIQ
CSGCKGAVSAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPLWKKFKSSFCEFIGVLV
RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDN
TQRQYEAERNKVMAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAE
VRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLRCLTALQGLYYNRELNTR
LELFTSRFKDRIVSMALDKEYDVAVQAIKLLTLVLHSSDEVLTAEDCESVYHLVYSAHRP
VAVAAGEFLYKKLFSHRGPEEEGMPRRGRQSLNGNLIKTTVFFFLESELHEHGAYLVDSL
WECAGELLKDWESMISLLLDEAMPGEEALTDHQETALIEIMLCAIRQACECHPPVGRGTG
KRVLTAKEKKTQLDDRTRITEIFAVALPLLLAKYSVDAEKVTNLLQLPQFFDLEIYTTGR
LEKHLDSLLRQIREVVEKHTETDVLEACSMTYHALCNEEFTIFNRVDIARSQLLDELVDK
FNRLLEDFLLEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFTSNYKLLNTGLQNGD
MPEQIVVHAMQCTHYIILWHLAKVSEGSSTKGNMVTLRKQMRAFCLMCQRYLTSVNTTVK
EQAFTILCDALMIFSHQIVSSGREQLEALIYTPDSPLQAELLNFILDHVFIDQDDDNNST
DGQQDDEASKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKETM
SKTRQIDKIQCAKTLILSLQQLFNEMLSDLGCNFDRSSSSFCGIKELARRFSLTFGLDQL
KTREAIAMLHKDGIEFAFKEPSPQGEGNPPLNLAFLDILSEFSSKLLRQDKKTVHLYLER
FMTFQMALQREDCWLPLISYRNSLQAGGDDDTMSVISGYSSRSSSIRTKKAKPASTGKRK
LPEAEESSSCSTDAVWMNQEQNVQTPVMMPSPHLTSTVLRDPKKMRPEESYMGVYAMTSE
QQHQQLPPQQHHHQTPMDYNTQVTWMLAQRQQAEARQQQERVSMQYAKMRSHMQNAIRRG
SGLMEDDEEPIVEDVMMSSEDRLEDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPSS
IMDDSVLNVSMF
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcacaagagttgcacacagagtttcagtttcctcaagagaccgatacacag
ttatcctctgacacagacgttgaggaccctgatgtcaagaatgcaaagcttgggaaagga
aagggtggaaggaaggggaagaaagcccctggagagaaggggaagggtggtggagcgaag
ggtactggccttggcggggtgaatggccaccaccaggagaatgggatggagagcatgacc
ctgttcgaggtggtgaagatggggaagagtgccacacagtccatcgttgatgactggatt
gagtcttacaagaatgatcgagacattgcactcctggacttgatcaactttttcatccag
tgctccggttgtaaaggtgctgtcagtgcagagatgttcagacacatgcaaaactctgag
atcatcaggaagatgacagaggaatttgacgaggacagcggggactacccgttaaccatg
gcagggccactgtggaagaagttcaagtcgagcttctgtgagtttatcggggtgctggtg
cggcagtgtcagtacagcatcatctatgacgagtacatgatggacacagtcatctcgttg
ctcacgggcctgtctgactcgcaggtccgagccttcagacacaccagcacactggcagcc
atgaaattgatgacagccttggtgaacgtggctctgaacctgagcatcaacatggacaac
actcagaggcagtatgaggcagagaggaacaaggtcatggccaagagggccaatgatagg
ctagagctcctgttacagaagcgtaaagagcttcaagaaaatcaagacgaaattgaaaac
atgatgaatgcgatttttaaaggagtgtttgttcacagatatcgcgatgccatagctgaa
gtccgggcaatctgcattgaggagattggggtatggatgaagatgtacagcgatgctttt
ctcaatgacagttatctgaagtatgttggatggaccatgcatgacaagcaaggagaagtg
cgtctcaggtgtctgactgcgctccagggcctgtactataaccgggagctcaacactcga
ctggagcttttcaccagccgcttcaaggaccgcattgtgtcgatggctctggataaggag
tatgatgttgcagtgcaagccataaaacttctgactcttgtcttgcatagcagtgatgag
gtcctgacagcagaggactgtgagagtgtctaccatctggtctactctgcccatcgacct
gtggctgtggctgcaggagaattcctctataagaagctcttcagccatcgaggtccagag
gaggaagggatgcccaggaggggcaggcagagcctcaacgggaacctcatcaagaccacc
gtcttcttcttcctggagagtgagctccatgagcacggggcctacctggtggacagcctg
tgggagtgtgcaggggagctgctcaaagactgggagagcatgatcagcctgctgctggat
gaggctatgccaggggaggaagccctgacagaccaccaggagactgccctgatagagatc
atgctgtgtgccatccgccaggcctgtgagtgccaccctccagtgggcagaggcactggg
aagagggtcctgacagcgaaagaaaagaaaacccagctggatgaccggacgagaatcact
gagatctttgctgtggcgttgcctctgttgttggccaagtactccgttgatgctgagaag
gtgaccaacttactgcagctaccgcagttctttgacctggaaatctacaccactggtcga
ttggaaaagcacttggactcgttgctgcgtcagatcagggaggtggtggagaagcacaca
gagactgacgtgctggaggcgtgctccatgacctaccacgctctctgcaatgaggagttc
accatcttcaacagggtggacatcgccaggtctcagctactggacgagttggtggacaag
ttcaacagactcctggaggacttcctgctggagggtgaggaaccagatgaggatgatgcc
taccaggttctgtccacactaaagaggatcactgctttccacaatgcacatgacctctct
aaatgggacctgttcaccagcaactataagctactaaacacaggacttcagaatggagat
atgcctgagcagattgtagttcatgcgatgcagtgcacacactacatcattctgtggcac
ctagccaaggtctcagagggcagctccacaaaggggaacatggtcaccctgaggaagcag
atgagggccttctgtctgatgtgtcaacgctacctcaccagtgtcaacaccactgtcaaa
gagcaggccttcaccatcctgtgtgacgccctgatgatcttcagccaccagatcgtgtcg
tcgggccgggagcagctggaggctctgatctacacgccagactcccccctacaggccgag
ctgctcaacttcatcctggaccacgtctttatcgaccaggacgatgacaacaacagcaca
gatgggcagcaagatgatgaagccagtaaaattgaggctttacacaagagacgtaacctg
ctggcagcgtactgcaaactgataatttacaatgtagtggagatgaacactggagctgat
atcttcaagcagtacatgaggtactacaatgactatggggatatcatcaaggaaacgatg
agtaaaacaagacaaattgacaagatccagtgtgccaagaccctcattctgagtttgcag
cagcttttcaatgagatgttatctgacctcggctgcaactttgaccgctcgtcgtcgtcc
ttctgcggcattaaagaactggcccgacgtttctcgttgacctttggcctggatcagctg
aagaccagagaggctatcgccatgttacacaaggatggaatcgagtttgccttcaaggag
cccagtccccagggagagggaaaccctcctctcaaccttgccttcctggacattctcagc
gagttttcctccaaacttctccgtcaggacaagaagactgttcacctctacctggagcgg
ttcatgaccttccagatggccctgcagcgagaggactgctggctgcccctcatctcctac
aggaactccctgcaggccggaggggacgacgacaccatgtctgtcatcagcggctacagc
agccgaagttccagcatcaggaccaagaaggccaagccagccagcaccggaaagaggaaa
ctgcctgaagcagaggagagtagcagctgcagcacagacgcagtgtggatgaaccaggag
cagaacgtgcagacgccagtgatgatgccctcgccacatctaacctccactgtgctgagg
gaccccaagaaaatgaggccagaggagagctacatgggtgtctatgctatgacatcagag
cagcagcaccaacagctgcccccccaacagcaccaccatcagacccccatggattacaat
acccaggtgacctggatgctagcccagagacagcaggcagaggcccggcagcagcaggag
cgagtcagcatgcagtatgccaagatgaggagccacatgcagaatgcaatccgccgcggt
tcaggactcatggaggatgatgaggagccaatagtagaggatgtaatgatgtcatcagag
gaccgtttggaagatctcaacgagggcatggattttgacactatggatattgatctgcca
ccatctaaaaatcgcagagagagatcagagctgaagccagactactttgatccttcttcg
atcatggatgattcggtcctcaatgtttcaatgttctaa
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