Salmo salar (Atlantic salmon): 106567864
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Entry
106567864 CDS
T04363
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106567864
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106567864
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
106567864
NCBI-ProteinID:
XP_013993166
UniProt:
A0A1S3LQM4
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Position
ssa13:78333110..78342259
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AA seq
1140 aa
AA seq
DB search
MENLTPEQWREIVNKKMRFPLELISAIQEGNIVMVCGLLNTGDGIIRQLDDSEDRLWREA
LNLSIRLGNEDTMDALLQGIKFDFRQIHEALLVAVDTNQARVVKRLLDRLDQEKGNKMDV
RSFSLAIFDHSIDDSQFAPGVTPLTLACQKDLYEIVTMLTQKGHIIPRPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLSAFGLSRELRKLSKKEPEFKPQYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQDALDQQAFEEGIPNLTRLRLAVNCN
QKQFVAHPICQQVLSSIWCGNLSGWRGSKTTWKLLVSVGIFFTMPLLCLVYWIAPKSKVG
KILKIPVIKFLLHSASYMWFLITLLGESITMELYRDQFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCMDMMVLSMYLASFTLRVLIMLKGHFLCQAPDGTEECAYF
TQTVRQDWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAQESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNIYVPYVTQPYLGRFNETFRFLFWTMFGVANQDYVDMPEFVVAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAFFYLIRGIFRKICCCCTLNSTPDYPPITSMSNGKEMDGGGSGENQIPYRQ
QVIRALVQRYIESERRKFEETKRKDVGNRITELNKVVGRLHAEMKAIMQVLVDSGQAAGD
IPNTDGSSILGKYIMGAKNNFRGFDNRLDNKHTPLRVTVEMGQEGKVAEEKAGAVVMLND
EGMEVEHDRKVEIGKDGRTAMGLDKKVEMEKEAKDGEMVVKQEVKVDVGLDGAEGTKQVG
DMDVVKMEEGRADGRKGERRAEEVVKESEQNMENGEKGEVREHKMERRGDSDGKGEKGIN
KARNNETVEKRVEGESSPGKAEVRMEVKDKGKKVDSSVNNTIGDKGVVGGDKTVNEMGGC
GNESKVDMGLEDVKEVERKVKAMELKEKRVVGKINVAERWNKGEGRAVEENVIEKKAAKA
GMVVVENTARAGVNILGEKVVPSPTGSSSSQDTGFGSQEGEGSINGGPMRPAYLSASSPD
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacaccggagcaatggcgggagatagtgaacaagaagatgcgcttccct
ctggagctgatcagtgccatccaggaggggaacatagtgatggtgtgtggcctgctgaat
actggtgacggtatcatccgccagctggacgactccgaggaccggctgtggagagaggcc
ctgaacctgtccatccgcctgggcaacgaggataccatggacgccctcctccagggcatc
aagtttgactttcgccagatccatgaggctctgctggttgccgtggacaccaaccaggcc
cgcgtggtgaagaggctcctcgaccgcctggaccaggagaagggcaacaagatggatgtg
cgatccttctccctggccatcttcgaccactctatcgatgactcgcagttcgccccaggc
gtgaccccgctgaccctggcctgtcagaaggacctgtatgagattgtcaccatgctgacc
cagaagggccacatcatcccacggccacacaagatctcctgtgcctgtctagagtgtagg
aacgggcggcagtatgacctgctgaagttctccctgtctcgcatcaacacctaccgtggc
attgccagccgggcctatctgtccatcacctcagaggacgccatgctcagtgccttcggc
ctcagcagggagctacgcaaactctccaagaaggaacccgagttcaagcctcagtacttg
ggtctggaggagctgtgccaggagtttgcggtggagctgctggggatgtgccgtaaccag
agtgaggtcaccaccatcctgaacagctgtggagatgaaagccaggacgcccttgaccag
caggccttcgaggagggcatccccaacctgacccgcctgaggcttgccgtcaactgcaat
caaaaacagtttgtagcccaccctatctgccagcaggtgctgtcctctatttggtgtggg
aacctgtctggctggagaggcagcaagacaacctggaagctgctggtgtctgtggggatc
ttcttcaccatgcccctcctctgcctcgtctactggattgcacccaagtccaaggtggga
aagatactgaagattccggtgataaagttccttcttcactctgcctcctacatgtggttc
ctcatcacattgttgggagagtccatcaccatggagttgtatagagatcagtttgcttcg
cgtcagcagaatattctgcacagctcattccacatggtgtgggtggtcgggttcttctgg
tatgaatgtaaggaggtgtggattgaaggtctgcggagctacttcctggactggtggaac
tgcatggacatgatggtactcagcatgtacctggcctccttcactctgcgcgtcctcatc
atgctaaaaggtcacttcctgtgccaggcccctgacgggactgaggagtgtgcctacttc
acccagactgtgcgccaggactggcatcaggaggacccccagctcatagctgaggtactg
tttgcagtgaccagtatgctgagcttcacccgcttggcctacatcctgcctgcacaggag
tccctgggtacactccagatctccatagggaagatgatcgatgacatgatgaggttcatg
ttcatattgatgattattggaactgctttcctctgtggtatcaataacatctatgttcct
tatgtcacccaaccatatcttggaaggtttaacgagacttttcgtttcctgttctggacc
atgtttggggtggccaaccaggactatgtggacatgcctgagtttgtggttgcagagttt
gtgggcagaatcctttacggcatcttcaccctggtgattgtgatcgtgctgctcaacatg
ctcattgcaatgatcaccaactccttccagaagattgaggatgatgctgatgttgagtgg
aaatttgcccgatccaagctctatctgagttacttccgagaaggtctcactatgcctgtc
cccttcaacatcatcccctcacctaaggcctttttctacctcatacggggtatttttcgt
aagatctgctgctgttgtactttgaactcgacaccagactatccccccataacctccatg
tcgaacgggaaggagatggatggtggagggtcgggggagaaccagataccttatcgccag
caggtgatacgggctctggtgcagcgctacattgagtctgaacgtcggaagtttgaggag
accaagagaaaagatgtgggtaatcggatcacagagctaaacaaggtggtgggcaggctg
catgctgagatgaaggccatcatgcaggttctggtggactctggccaggctgcaggagac
atccccaacactgatggctcatccatcctggggaaatacataatgggagccaagaacaac
ttcagggggttcgacaacaggctggacaacaaacacacacctctacgggtgactgtggag
atgggacaagagggaaaagtggcggaagagaaggctggagcagtggtgatgctaaatgac
gaagggatggaggtggaacacgacagaaaggtggagataggaaaggatggaaggacagca
atgggactagacaaaaaagtggagatggaaaaggaggctaaggatggagagatggtggtc
aaacaggaagtaaaggtggatgtggggctagatggagcagaggggacgaagcaggtagga
gacatggatgttgtgaagatggaggaggggagagctgatggaaggaagggagagagaagg
gcggaggaggtagtgaaggagtcggagcagaacatggaaaatggagaaaagggagaggta
agagagcacaagatggaaaggagaggagacagtgacgggaagggggagaaggggataaat
aaggcacgcaacaatgagacggtggagaaaagggtggagggagagtccagtccgggtaag
gcagaagtaaggatggaagtgaaagacaaagggaaaaaggtagatagcagtgtgaataat
acaatcggggacaaaggagttgtaggaggtgacaaaacagttaatgaaatgggaggatgt
gggaatgaaagtaaagtagacatgggactggaagatgtgaaagaggtagagaggaaggtc
aaagcgatggaactaaaggagaaaagagtggtggggaagatcaacgtggcagagaggtgg
aataagggggaggggagggcagtggaggagaatgtgattgaaaagaaggctgccaaggct
ggcatggtggtggtggagaatactgccagggctggggtgaatatcctgggggagaaggtg
gttccttccccgaccggtagcagcagctcacaggacactggcttcggctcacaggaaggg
gaggggtccatcaatggaggaccaatgagacccgcatatctgagtgcatcatctccagat
tag
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