Salmo salar (Atlantic salmon): 106567980
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Entry
106567980 CDS
T04363
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1
KO
K04650
nuclear receptor co-repressor 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
106567980 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106567980 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106567980 (ncor1)
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106567980 (ncor1)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
106567980 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
106567980
NCBI-ProteinID:
XP_013993394
UniProt:
A0A1S3LS24
LinkDB
All DBs
Position
ssa13:72730797..72852562
Genome browser
AA seq
2541 aa
AA seq
DB search
MSSSSGYPPTQGSFSSEQSRYPPHSVQYTFSTTRHQQEFTVPDYRGHLQDQQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSVTSQQQTDGHEALEAKRPRMETVSEAHFSHNALSGGI
VLPLQSHQVQDSLRASGGEVKKETQFSGMKAESQSPGGLHRVGEEQDGSPSKLSKEELIQ
SMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPIPQEHNKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKRLILFFKRRNHAR
KQREQNICQRYDQLMEAWEKKVERMENNPRRKAKDGRTREYYERQFPEIRKQREQQERFQ
RVGQRGTGMSATIARSEHEISEIIDGLSEQENNEKQMRQMSVIPPMMYDTEQRRVRFINM
NGLMDDPMKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVSDCVLYYYL
TKKNQNYKTLVRRNYGRRRGRNQQITRPSQEDKSDDKIEEEKSEKSEKKEDEQNKEEEEK
DEKEDSRDIGKDKDKCDGGEDEDGKEQSTPRGRKTANSQGLRKGRITTRSMANEAASVAT
EEPLPPASAPEPALPAESPQPPKAEPTTQKAIREPTKTAPGGAPMDPNRGALGTAAAANI
ETGETSRWTEEEMEVAKKGLVEHGRNWPAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQ
QHKQDTRRARGDRDPSQSESMASADDDENPEDSDGGENSSDTESAPSPSQVDPSKAGGES
QTGDIAGGSESQRSDQDQASDRKGQDPSYGELRVKLEKSPDGESRDPDSQEDQDRERARA
AYEGQVHPKCEPQEVDMKPGGTEVQVKVEPDSAKEKGDNGEREEQREGHHSDNDSSATCS
ADEDVDAEPERQRIFSSMDKPSLLSPPGSVLMSTAKQAHLNMQQLQQRTAAIPPMVSHYS
NPHFSMIRYAHSERQAYGGRQQGESMSCLDQPTRQVGPFSTGGMPMGAPLSGFAMFQHQI
KAVHESAHAEDKQRQDQADPEHSRQPPNCPRFTTHSPTVLDREGKPFPYMPYDMKMALEQ
EAQSGRPGSPYRLSPRDMSKASPQPNDPNASRYSVPPVLQPAPNQVVQSLPDGVRVTFSR
HSRPANIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTYLSSHAVYGGPEVAKSSVGSIS
LGLPRQQDPTKPVSYIKQEECSPRGQSEGLLSQMQYEGVVRGGPLDGGISRGNPARGSIT
QGTPALSGSSIAADLLKGTITKLTTEDLNSPEKAREQLTKGHVIYEGKSGHILSYDAIKN
PREATCSPRSGHELKRSHDMMEVARGHPGREGAPFEGLIIRALPRESPHGESKERPMITG
SIMQGTPRTSAEAYEESMKYGKQIKRESPPIRSFEGGIGKGKPYEGVNTIKEMGRSIHEI
PRQEQPGQDPRKTPDMAANSRAAMEGSISQGHPLSQSAIKHNVKSLITSPSRLPHGPTMP
QLEAMERAKYEESKVAAEQQQRARHTSVVNSATSVLRSTHQEQGKSQLSPGMYQDADARR
TPVNYSTSSMSRGSPMLGRGQEGSGKPTSHDRKSAMTPNQRESVPAKSPVSGGDPNHPMA
SHSPFDPHHRPMAPGEPRFHLPPHLDPTLFHRAVLDPAAYMFPRQPSPTGYHNTYQLYTM
ENTRQTILNDYITSQQMQVIPRPDVARVLSPREQQQIAISYPPGARGIIDLAQMPPTILL
PHPGGTGTPTMDRITYIPGAQPPFPPRPFNPASISPVCFFVSTGHQAHLAATAAACQERE
RERERERERERDREHREKEREKERERENREREREEYRQRERERVVAAAVANDYMRGGPGQ
PDRPGSRGYLRSPSPSMRSQEAQQQRPSIFQGTNSKGVITPLMPSAAAAQAGARYSTAAD
ALAALVDAAASAPQMDVNKGKDSSKHDRDDDMSSSSSSSSAARRQHEQQQQEADRRSMQS
PYMSLPGGKPHPGYAEGSGGPQGGKDKGPPTKSRIEEELRTRGKTTITAANFIDVIIKRQ
IASDKDSRERGSQSSDSSSSLTSSRYEVPSGGAIEVISPANSPAQAQQEKQQQDDRERAD
RDRAAQAATQAAGMRSFDMIRYRQSTESQQPPSSQADGGYSQSQQVPKTHRVMTLADHIS
HIITQDFARNQDPPQSSTTFQSAQLPVSSSGPGGRAKGHSRYSPENQTQAPSHHQRPTPS
RVSPENATDKPRARPGKSPDRGGRGAVESYEPISPPQSYQDKQQEAREQQQQQQPQRREA
DQPEMRGDSRSPGSVSYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGVGDSDVGNAQPGT
EIFNLPAVTSSSSVNPRNHSFSDPASNLGLEDIIRKALMGNLEERPEEHQGGPQPSCNTP
SNEARQEANPSPSMGKQKLQSKANSRKSKSPNPGQAYAATQAAGGERPSSVSSVHSEGDY
HQQAPAWAWEDRPSSTGSMQFPYNPLTMRMLSSTPPTSMASPSMQAQQPPPGGPLGSQQQ
RVWEREPLLSEQYETLSDSDD
NT seq
7626 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccctacccaggggagcttcagcagcgagcagagccgc
tacccaccacactctgtccagtacaccttcagcaccacacgtcaccaacaggagttcacc
gtcccggactaccgaggtcacctgcaggaccagcagggtcggcgaaggccttccttgctt
tctgaattccaccctggaactgagaggcctccagagagacgtcatggctatgagcaacag
ttccacagtgtcacctcccagcagcagaccgatggacacgaggccctggaagccaagcgg
cctcgcatggagaccgtctctgaggcccacttttcccataatgccctgtccggaggcatc
gttctgcccctgcagtcccaccaggtccaggacagcctcagagcctctggaggggaggtc
aagaaggagacccagttcagtggcatgaaagccgagtcccagtccccaggagggctgcac
cgtgtgggggaggagcaggacggctcgccctccaaactgtccaaggaggaactgatccag
agcatggaccgtgtggacagagaaatcgctaaagtggagcagcagatcttcaagctgaag
aagaagcagcaacaactggaggaggaagcggcgaagccagtggagccagaaaagccggtg
acccctccccccataccacaggaacacaacaaacaccgcagcatcgtccagatcatatat
gacgagaacaggaaaaaagctgaagaggcccataagatatttgaaggtcttggtcccaag
gttgaactgcccctttataaccagccgtctgatactaaagtataccatgacaacataaag
actaatcaagtgatgaggaagaggctgattctgtttttcaagagaaggaaccatgctcgt
aaacaaagggaacagaacatctgccagcgctacgaccagctgatggaggcgtgggagaag
aaggtggagcggatggagaacaacccgcgtcgcaaggccaaggatggccgcaccagggag
tactacgagagacagttccccgaaatacgcaagcagagagagcagcaggagcgcttccag
agggttggtcagagaggaactggaatgtctgcgaccatcgccagaagcgagcatgagatt
tctgaaatcatcgacggcctttctgaacaggagaacaacgagaagcagatgagacagatg
tccgtcatcccgcccatgatgtacgacacagagcagaggcgagtcaggttcatcaacatg
aacggcctgatggacgacccaatgaaggtgtacaaggctcggcagttcatgaatgtgtgg
accgaacacgagaaggagattttcaaggaaaagtttgttcagcacccaaagaattttggc
ctcattgcttcctatctagagagaaagtgtgtctccgattgtgtcctgtactactacttg
accaagaagaaccagaactacaagacgctggtgagacgcaactatggaagacggcgaggg
agaaaccagcaaataacacgaccgtcacaagaagacaagtcagacgacaaaatcgaagag
gagaaatcggagaagtcagagaaaaaagaggacgagcagaataaggaagaggaagagaaa
gatgaaaaggaggactccagggacatcggcaaagacaaagacaagtgtgacggtggggaa
gacgaggacggaaaggagcagagcacgccgcgcggcagaaagaccgccaacagccagggc
ctgcgcaagggaaggatcaccacgcgctccatggccaatgaggctgcctccgtggcgacc
gaggagccactaccgccggcctccgcccctgagcctgccctgcctgcagagtctcctcag
ccccccaaagctgagcctactacacagaaggccattagagagcccaccaaaactgcacca
ggtggagctcccatggaccctaacagaggagcactaggaactgctgccgccgcgaacatt
gaaaccggtgagacttctcgctggaccgaggaggagatggaggttgccaaaaaaggcctt
gtggagcatgggcgtaactggccagccattgccaagatggtgggcaccaagagcgaggct
cagtgcaagaacttctacttcaactacaagagacggcacaacctggacaacctgctccag
caacacaagcaggacacccggcgggcacggggtgatcgggacccgtctcagagcgagagc
atggcctcagctgacgacgatgaaaacccagaggatagtgacggtggagagaacagctca
gacacagaaagcgccccgtccccgtcccaggtggacccctccaaggccggaggagagtcc
cagacaggagacattgctggagggtcagagagccagcggtctgatcaggaccaggccagc
gatagaaagggccaggatccgtcctacggggagctgagggtcaagctggagaagagcccg
gacggagagtccagagaccctgactctcaggaggatcaggacagggagagggcccgggca
gcctacgagggccaggtgcaccccaagtgcgagccccaggaggtggacatgaagcccggg
ggtactgaggtacaggtgaaggtggagcctgactcggctaaggagaagggggacaatggg
gagagagaggagcagagagaggggcaccactcagacaatgactccagcgccacctgcagt
gcagatgaggatgtggacgctgagcccgagagacagaggattttctctagtatggacaag
ccttcgctgctcagccctcccggctcagtgctgatgtccacggccaagcaggcccacctc
aacatgcagcagctccagcagcgcaccgctgccatcccgcccatggtcagtcactatagc
aacccacacttttctatgatcagatatgcccattcggagaggcaggcatacggaggcagg
caacagggtgaaagcatgtcttgtttagaccaacctacccgtcaagtgggtcctttcagc
actggcgggatgcccatgggagcccccctcagtggctttgccatgttccagcaccagatc
aaggcggtgcacgagtcggcccacgcggaggataaacagagacaggaccaggccgacccc
gagcacagcagacaacctcccaactgcccgcgcttcactacccacagccccactgtactg
gacagggagggtaagcccttcccctacatgccttatgatatgaagatggctctggagcag
gaggcccagtctggtcggccaggctctccctacaggctctctcccagggacatgagcaag
gcctctcctcagcccaacgaccccaacgcctcccgctacagcgtgcctccagtgctccag
ccagctcccaaccaggtggtccagagcctgcctgatggagtccgcgtgactttctccaga
cacagccgacctgccaacattccatctcctcctccactcattccaacctccaaacccaca
gacaagccttcctttatccagggcggctccatctcccagggaactcctggtacgtacctg
tcatcccatgctgtctacggtggcccagaggttgcaaagagctcagtgggctccatatcc
ctgggcctgcccaggcagcaggaccccaccaaacctgtgtcctacattaagcaggaggag
tgttctccgcgtggccagtcggagggcctcctctcccagatgcagtatgagggggtagta
agaggaggcccactggatgggggtatcagcagaggcaacccagccagaggatcaatcaca
cagggcacgccagccctgtctgggtccagcattgcggctgacctgctgaagggcaccatc
accaagctgaccacggaggacctgaacagcccagagaaggcccgggaacagctgaccaag
ggacacgtcatctatgagggcaagagtggacacatcctatcctacgacgccattaagaac
ccaagagaggccacgtgtagccccaggtcaggccatgagctcaaacgctcccacgatatg
atggaggtcgccagaggccaccccgggagagaaggagcccccttcgaggggttgataatc
cgagccctgcccagagaaagtccccatggggagtctaaggagaggcccatgatcactgga
tccatcatgcaaggtacacccagaacctctgcagaggcctatgaggagagcatgaagtac
ggcaagcagataaagagggagagcccacccatccgctcatttgagggggggataggtaag
ggtaaaccctacgagggggtgaacaccattaaggagatgggtcgctccatccatgagatc
ccccgtcaagagcaacctggacaggacccccgcaagacccccgacatggctgccaacagc
cgagccgccatggagggctccatatcccagggccatcctctgagccagtcggccatcaag
cacaacgtcaagtccctgatcaccagtcccagtaggctgccccacggccccaccatgccc
cagctggaggccatggagcgggccaagtacgaggagagcaaggtggcggcggagcagcag
cagcgggcgcgccacacctctgtggtcaactcggccacctccgtgctgcgctccacccac
caggagcaaggcaagtcccagctcagcccgggcatgtaccaagacgcagatgcccgcagg
accccggtcaactacagcaccagctccatgtccagaggttcgcccatgctgggccgagga
caggagggctctgggaagcctacgtcccacgataggaagagtgccatgacccccaatcag
agagagagtgttccagccaagtcccctgtgtcagggggtgaccccaaccaccctatggcc
tcccacagcccctttgacccccaccaccgccccatggcccccggagagcctcgcttccac
ctgcctccacacctagaccctaccctcttccaccgggccgtcctggaccctgctgcatac
atgttcccaaggcagccgtccccgacgggctaccacaacacctaccagctgtacaccatg
gagaacacaaggcagaccatcctcaacgattatatcacctcacagcagatgcaggttata
ccacggcccgatgttgccagggtcctgtcgccacgggaacagcaacagattgccatctct
tatcctcccggagcgcgagggattattgatctagcccagatgcctccaactatcctgttg
cctcaccctgggggaacaggtactcccactatggaccgcatcacctacatccccggagct
caaccccctttccctcctaggcctttcaacccagcctccatatctccagtctgtttcttt
gtgtccacaggccaccaagcccacctcgcagctacagcagcggcctgtcaggagcgagaa
cgagagagggagcgcgaaagagaaagggagcgcgatcgggagcatcgagagaaagagagg
gaaaaggaacgagaaagggagaacagggagagggaaagagaggagtacagacaacgagag
cgtgagcgagtggtggctgcagcggttgccaatgactacatgcgtggaggtccagggcag
ccagatagaccaggaagccgtggttacctgcgtagcccctccccatctatgaggtcacag
gaagcccagcagcagcgacccagcatcttccaaggaaccaacagcaagggcgtcatcacc
cctctcatgccgtcagcagcagcagcccaggcaggagcccgttacagcactgcagccgac
gccctggctgccctggtggacgctgccgcctccgcccctcagatggacgtcaacaagggc
aaggactcctccaagcacgatcgagacgacgacatgtcttcatcatcatcatcatcctct
gcggccaggcggcagcacgagcagcagcagcaggaggcagacaggcgctccatgcagtct
ccctacatgtctctgccaggggggaaaccccacccaggatacgctgaggggtctggtggt
ccccaggggggaaaggacaagggtccccccaccaagtcacgcatcgaggaggagctgagg
accagaggaaagaccaccatcacggccgccaacttcatcgacgtcatcatcaagcgtcag
atcgcctcggataaggactcacgggagagaggctcccagagctccgattcctccagcagc
ttgacatccagtcggtatgaggtgcccagtggaggagccatcgaggtgatcagcccagcc
aactctccagcccaggcccagcaggagaaacagcagcaggatgacagggagagggctgac
agggacagggccgcacaggcagcaacacaagcagctggcatgcgttcctttgacatgatc
cgctaccgccagtcaacggagtcccagcagcccccctcctcccaggctgacggagggtac
tcccagtcccagcaggtccccaagacccaccgggtcatgaccctggctgaccacatctcg
catattatcacccaggactttgccaggaaccaggatcctcctcagtcctccaccacattc
cagagcgcccagctgccagtatctagctcgggccccgggggccgtgccaagggccacagc
cgctacagcccagagaaccagacccaggccccatcacaccaccagagacccacgcccagc
agagtgtctcctgagaacgccactgacaagcccagagccagacctggtaaatcccctgat
cggggtggcaggggggccgtggagagttatgagcccatctcccctccccagagctaccag
gataaacaacaggaggccagagagcagcagcagcagcaacaaccccagagacgagaggct
gaccagcctgagatgaggggcgactctcgctcccctggcagtgtcagctacctgccctcc
ttcttcaccaagctggagaacacctcccctatggtgaaatccaagaagcaggagatattt
cgtaagttaaactcctctggtgtcggggattctgatgtaggaaatgcacaaccaggcaca
gagatcttcaacttgcccgctgtgaccagctcaagcagcgtgaaccccaggaaccactcc
ttcagcgatccggccagtaaccttggcctggaggacatcatccggaaggccctgatgggc
aacctggaagaaaggccagaggagcaccagggagggcctcagcccagctgtaacaccccc
agcaatgaggcccgccaggaggccaacccctcgccgagcatgggcaagcagaaactgcag
agcaaagccaacagccggaagtccaagtcgcccaacccaggtcaggcatacgcagcaacc
caggcagcaggaggtgagcggccctcatcagtctcctccgtccactcagagggagactac
caccagcaggccccggcctgggcctgggaggaccggccctcgtccacaggctctatgcag
ttcccctataaccccctgaccatgcgcatgctgagcagcacgccccccacctccatggcc
tccccctccatgcaggcccagcagcccccaccaggaggccctctggggtcccagcagcag
cgtgtgtgggagcgggagcccctactgtcggagcagtatgagaccttgtcagacagcgat
gactga
DBGET
integrated database retrieval system
