Salmo salar (Atlantic salmon): 106568027 Help Entry 106568027         CDS       T04363                                  Name (RefSeq) homeobox protein cut-like 1   KO K09313   homeobox protein cut-like Organism sasa  Salmo salar (Atlantic salmon) Brite KEGG Orthology (KO) [BR:sasa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:sasa03000]     106568027 Transcription factors [BR:sasa03000]  Eukaryotic type   Helix-turn-helix    Homeo domain CUT     106568027 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CUT Homeodomain Homeobox_KN HTH_40 Motif Other DBs NCBI-GeneID:  106568027 NCBI-ProteinID:  XP_013993503 UniProt:  A0A1S3LR98 LinkDB All DBs Position ssa13:complement(69970455..70203259) Genome browser AA seq 1590 aa AA seqDB search MFNKRCPCSIAPLRVLRALPLLSTELQPLALSVSASHSVSICLKMAANAGSMFQYWKRFD LQQLQRELDATATALANRQDESEQSRKKLIDQSREFKKNTPEDLRKLVAPLLKGFQAEID AVSKRSKESEAAFLSVYKRFIDVPDPVSALEATQQLQLKVQRMHDIETENQKLRETLEGY TQEIAEVKNHEVTIKALKEKIEEYEETLKKQAEELGQEERREEEKEKKEGEDGQLHNNHA EEESQRQENQESAGSKLEEADSKAQSLQTALEATQAELLDLKSKYDKESTSKANEIEVVM SDLERANQRADVAEREAEALREQLTSANKSLQLATQIQKAPDMEQALEVLSRSSLEVELS AKEREVLHLAEDVQRLQASLANVRENSALQISQLEQQLSTKESSLKQLEEKLQEQADYED IKKELSFRKSVEFSSSNCSSTQDSKKPLQLLLEKSRGLHSESSSLRLNNSELSSLRERKV KESSEGQQRLCTTPMGTNLKGSPPPPSSQLLLRTGSGGSSDTTPVTAANGTHHFSPTSGG LGGQDFFSPSSLASAGTAFPLGGKVVLNSLLQRQLMQTFYSKALQDSVSASGQALLFSPS NYPTHNSLSASPLPPHQSLQSQSQHPSAGSPDVNGLAPSPSQSEGAGSVSEGEDMDTSEI ARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTIRGKEPFHKMRQFLSD EQNILALRSIQGRQRENPGQNLNRVFQEVPKRRTGSEGSSRPGNITTRIRTSESGSDEAI KSILEQAKRELQVQKADGVEDRQRRQTGYPRGMGNYFAKYAQSLRLVDSSQPPPSSSIGG GGGGIGSGGSSSSDETIRSILEQARREMEAQQAALEPILKASSMGPSDLALLSPKLLGAP ILPASYSPLALSLKKPSIPPTSSPSPSSLLDFHSAMVKKEAGEVVGEGGGGGGLLMDGGT KQGRGSWRDQWWSSMHPGGQGATASLNDDARSQEDSKEKPPRLAGSSSVLAPSSVSISSL DYWKDWPRAESPYSQASSEPGGGTKTQGPSRADTPQSSLSPLSLGPLGSLLTPAAKQAKP VVVPLTPEQYEFYMYQEVDTAELTQQVKDKLAKNGICQRIFGEKVLGLSQGSVSDMLSRP KPWSKLTQKGREPFIRMQLWLNGELGQNVLPLQGQPQENTPKTSASCSPAPESPLSSAEE SVKSLGEQGGGGGGCGGGSSQVPPREPSEPSESQPGTPLPVPGHSGLSIQEMVAMSPELD TYVITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQL WLQDPRNVEKLMDMKRMEKKAYMKRRHSSVSESQTADSGGLSGGDFSQGGSPQHGLGHHL HQQQPPQQHLKKARVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHN YRSRIRRELFIEEIQRGEGGSPSTRAGKASEGDSCDGTESDGTVEGTRPGHEHHPASEGE GGSDHRDEGTTSATGSNAAGTSGHHKGGALDSLFSFPESTHVSSASVATTTAARNPRDSS LRKKKAANLNNIIHRLEKAAGKDEPHEWEF NT seq 4773 nt NT seq  +upstreamnt  +downstreamnt atgttcaataagcgatgcccctgttcaattgctccgctccgtgttttgcgcgcgctcccc ctcctttctactgaactccagcccctcgctctctctgtatcagcctctcactccgtctca atatgtctcaagatggcggccaatgcgggatcgatgtttcaatattggaagcgctttgat ttacagcagctgcagagagaactggatgccaccgccacagccctggccaacagacaagat gagagcgagcagtctaggaaaaagctcatcgaccaaagccgtgagttcaagaaaaacaca ccagaggatctgcgaaagctggtagctccgttgctcaaaggcttccaagcggagatcgac gcggtgagtaaaagaagtaaggagtcagaggctgccttcctaagcgtgtacaagagattc atcgatgtcccagaccctgtgtcggccctggaggctacccagcagctacagctgaaggtc cagaggatgcacgacatcgagacggagaaccagaagctccgcgagacgctggagggctac acccaggagatcgctgaggtcaagaaccacgaggtcacaattaaagcacttaaggagaag atagaagagtatgaagagaccctgaagaagcaggctgaggagctgggtcaggaggagagg agagaggaggagaaggagaagaaagagggagaggatgggcagctccacaacaaccatgca gaggaggagagtcaacgacaggagaaccaggagtctgcggggtcaaagctggaggaggcc gacagtaaggcccagtccctacagacagcacttgaagcaactcaggcagagcttttggac ctgaagagcaagtatgacaaagagtcaacatcaaaggccaatgagattgaggtggtgatg tcagacctggagagagccaatcagagagcggatgtagcggagagggaagcagaggctctt cgggaacagctgacgtccgccaacaagtctctccagcttgccacacagatccagaaggcc cctgacatggagcaagccttggaggttctgtcacgctccagtctggaggtggagctgagc gccaaggagcgggaggtactgcacttggctgaggacgtgcagagactgcaggccagcctg gccaacgtccgtgagaactcggccttgcaaatcagccagctggagcagcaactcagcacc aaggagagctcactcaagcaactggaggagaaactgcaggagcaggcagactacgaagac atcaagaaagagctcagtttccgcaagtccgtagagttcagctcttcaaactgctcttca acacaggactctaagaagcctctgcagttgttgttggagaagagtcgaggcctgcattct gagagctcctccctgcgcctgaacaacagtgagctgagtagtttgagagagcgaaaggtc aaagagtcatcagagggacaacaacgtctttgcaccacacccatgggcaccaacttgaag ggctcccctccccctccctcctctcagctcctactgcgcactggctcaggtggttcctcc gacaccacccctgtcactgccgccaatggcacacaccacttctcgcccacgagtggcggg ctgggtgggcaggacttcttcagcccctcctctctggcgtcggcgggcaccgctttcccc ctggggggcaaggtggtgctcaactccctgctgcagcgccagctcatgcagaccttttac tccaaagccctgcaggactcagtgtccgcctccggccaggccctgctcttctccccttcc aactaccccacccataattccctttcagccagccccctaccaccccatcagtctttgcag tcgcaatcccagcacccgtcagcgggcagcccggatgtcaacggcctagccccctcgccc agccagtcagaaggggcggggagcgtctcagaaggtgaagacatggacacgtctgagata gcgcgtcaggtcaaggagcagctgatcaagcacaacatcgggcagaggatctttggccac tacgtgctggggttgtcccagggctcggtcagtgagatactggccaggcccaagccctgg aacaagctgaccatccggggcaaggagcccttccacaagatgaggcagttcctgtccgac gagcagaacattctggcactgcgcagcatccaggggaggcagagagagaacccaggccag aacctgaacagagtgtttcaggaggttccgaagcgaagaaccggctccgaaggctcctcg aggccaggtaacatcaccacgcggatccgcacctcggagagtggctcagatgaggccatc aagtccatcctggaacaggccaagagagagctgcaggttcagaaggctgatggtgtggag gacagacagcgacgacagacaggttacccccgaggcatgggcaactattttgcaaaatat gcacaaagtctcagactcgtagactcgtcccagccccctccctcgtccagcattggtggt ggtggaggtggtatcggctcaggcggatcctccagttcagacgagaccatccgctccatc ctagagcaggccaggagagagatggaggcccagcaggccgccctggagcccatcctcaag gcatcctccatgggcccctccgacctggccctgctctcccccaaactcctgggcgcgcct atcctcccggcctcctactcgcccctggccctctccctcaagaagccctccatcccccca acctcctctccctcgccctcctccctcctggatttccactctgccatggtgaagaaggag gcaggagaggtggtgggagaaggcggggggggaggagggttgctaatggatggtgggacc aagcaggggcgaggctcctggagggatcaatggtggagcagtatgcaccccggggggcag ggagccacagctagcctgaatgacgatgcgcgtagtcaggaggacagtaaggagaagcct ccccggctggccggctcatcctcggtgctggcaccgtcctccgtctccatctcctccttg gactactggaaggactggccccgggccgagtccccgtactcccaggccagctctgagcct ggcgggggcaccaaaacccaggggcccagccgtgccgacacaccccagagcagtctctct cccctaagcttggggcctctggggtccctgttgacccccgcagccaaacaagccaagcct gtggtggtgccgctcactcctgagcagtacgagttctacatgtaccaagaggtggacacg gccgagctcacgcagcaggtcaaagacaagctggccaagaacggcatctgccagcgcatc tttggagagaaggtgctgggcctgtctcagggcagtgtgagcgacatgctgtccaggccc aagccctggagcaagctgacccagaagggccgggagcccttcatccgcatgcagctctgg ctcaacggagagctgggccagaatgtcctgcctttacagggccagccacaagaaaacacc ccaaagacctcagccagctgcagcccggccccggagtcccccctcagctcagccgaggag tccgtgaagagccttggggagcaggggggaggaggagggggatgtggaggaggatcatcc caggtcccccccagggagcccagcgagccctctgagtcccagcccggcacgccactgccc gtccccggccactcaggtctcagcatccaggagatggtggccatgtccccggagctggac acctatgtcatcaccaagaaggtcaaggaggtgctgaccgacaacaacctcggtcagcgt ctgtttggggaaaccatcctgggtcttactcagggctcggtgtctgacctactggcgagg cccaagccctggcacaagctcagcctgaagggacgcgagcccttcgtccgcatgcagctc tggctccaggacccgcgcaacgtggagaaactcatggacatgaaacgcatggagaagaaa gcgtacatgaagcggcgccacagctctgtgagcgagagccagacggcggacagcgggggc ctgtcagggggagacttcagccaggggggcagcccccagcacggcctcggccaccacctg caccagcagcagcctccccagcagcacctgaagaaggcccgtgtggtgctggcccctgag gagaaggaggccctgaagagggcctaccagcaaaagccctacccctcgcccaagaccatt gaggagctggcctcacagctcaacctcaaaaccagcaccgtcatcaactggttccacaac tataggtctcgtatccgacgggagcttttcatcgaggagatccagcgaggtgagggcggc tccccgtccaccagggcaggcaaggccagtgagggcgacagctgtgacggtaccgagtca gatggcacggtggagggcacacgccccggccacgagcaccacccggcctcagaaggcgag ggggggtccgaccacagagacgagggcaccacgtcagccaccggcagcaacgctgcaggt accagcggccaccacaagggcggcgccctggacagcctgttcagcttccccgagagcacc catgtttcctctgcgtctgtggccaccaccactgctgcccgcaacccccgcgacagcagc ctgcgcaagaagaaagccgccaacctcaataatatcatccaccgcctggagaaggctgcc ggtaaagacgagccccacgagtgggagttctga

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