Salmo salar (Atlantic salmon): 106568058
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Entry
106568058 CDS
T04363
Name
(RefSeq) nucleolysin TIA-1 isoform p40-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106568058
03041 Spliceosome [BR:
sasa03041
]
106568058
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106568058
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106568058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Flg_new_2
Motif
Other DBs
NCBI-GeneID:
106568058
NCBI-ProteinID:
XP_013993539
UniProt:
A0A1S3LSJ6
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Position
ssa01:136150410..136158003
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AA seq
386 aa
AA seq
DB search
MMDDETPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHA
ASSLAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIKAAFAPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
ATYETNTKHLSFEEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFTPFGQIMEIRVFPDKG
YSFVRFNSHEGAAHAIVSVNGTSIDGHVVKCYWGKETTDMVSPMQQVQMPQQNKIGFAAQ
PYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAWNQQGFNHLQAGAGWTGVGAVSNGGV
VEPGQGVNGTVLANQSGMGTAGYHTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgaaacacccaagaccctgtatgtggggaacctgtcccgggatgtgact
gaagccctcatcatgcagctgtttggacagatcggcccctgcaagagctgtaaaatgata
gtagatacggcaggtaatgacccatactgctttgtggagttctacgaacacaggcacgct
gcctcgtcactcgcagccatgaatggtcgtaaaataatgggtaaggaggtcaaggtgaac
tgggccacaacccctagcagccagaagaaagacacaagcaatcacttccatgttttcgtt
ggagacctcagtcctgaaatcaccacggatgacatcaaagctgctttcgccccctttggg
aggatatctgatgctcgggtggtgaaagacatggctactggcaaatctaaaggctatggc
tttgtgtccttcttcaacaaatgggatgcagagaatgccatccaacagatgggaggtcag
tggttgggaggacggcagatcaggactaactgggccaccaggaagccccctgcgcccaaa
gccacctatgagacaaacaccaaacacctgtcgtttgaagaggttgtgaaccagtccagt
cccagcaactgtaccgtctactgtggaggtgtcacaacaggcctcacagagcaactgatg
aggcagaccttcacccccttcggtcagatcatggagatcagagttttcccagacaaaggc
tactcatttgtgaggttcaactcccacgagggagcggcccacgccatagtgtcagtgaac
gggacgtccatagatggtcacgtggtgaagtgttactgggggaaagaaaccacagacatg
gtcagccccatgcagcaggtacagatgcctcagcagaacaaaatagggtttgcagcgcag
ccctacggccagtatgcccagtggtacggtaacgcccagcagattggccaatacgtccca
aacgggtggcaggtgcccacctacggagtctatggacaggcctggaaccagcagggattc
aaccatttacaggcgggtgcagggtggacgggcgtgggagccgtcagtaacggcggtgtg
gtggagcctggacagggagtcaatgggactgtgctggccaaccagtccggcatgggcacc
gctggctaccacacccactga
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