Salmo salar (Atlantic salmon): 106568098
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Entry
106568098 CDS
T04363
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106568098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106568098
03012 Translation factors [BR:
sasa03012
]
106568098
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106568098
Translation factors [BR:
sasa03012
]
Eukaryotic type
Release factors
106568098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
106568098
NCBI-ProteinID:
XP_013993604
UniProt:
A0A1S3LSR5
LinkDB
All DBs
Position
ssa13:85384586..85392050
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AA seq
446 aa
AA seq
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MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYHKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAATLFLCNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLTNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKAMEMGAVEILIVYENLDTMRYILRCHGAEGLAMAEKGTDEKTLYLTPEQE
KDKSHFTDKETGQDHELIESLPLLEWFANSYKKFGACLEIVTDKSQEGSQFVKGFGGIGG
ILRYRVDFQAIEYQGEDDELFDLDDY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccaacgcagcggataggaacgtggagatatggaagataaagaagttg
atcaaaagtctggaagctgctcgggggaatggcacgagtatgatatccctgatcatcccg
cctaaggaccagatctccagagtggccaagatgttggctgatgagtttggcactgcatcc
aacattaaaagcagagtcaacaggctctctgtgcttggagccatcacctctgtacagcag
agactcaaactctaccataaagtgcctcccaacggcttggttgtgtactgtggcaccatt
gtgactgatgagggcaaagagaaaaaagtcaatatcgactttgagccttttaaacccatc
aacacttctctgtatctctgtgacaacaagttccacacagaggctcttacagcattgctc
tcagatgacagcaagtttggtttcattgtgattgatggaagtggcgccctcttcggaacc
ctacagggcaacaccagggaggtgctgcataagttcacagtggacctacccaagaagcac
ggcagaggaggacagtctgccttgcgttttgctcgtttgaggatggagaagagacataac
tacgtgcggaaggtggcagagacggcagccacgctttttttgtgcaacgacaaggtcaac
gtagcaggcatggtcttagctggttcagctgacttcaagacggagctcagccagtcagac
atgtttgacccgaggcttcaagctaagatcctgaagctggttgacatatcatatggtggg
gagaatgggttcaaccaggccattgaactgtccgcagaagtgcttaccaatgtcaaattc
atccaggagaagaaactaataggacgatactttgatgagatcagccaggatacggggaag
tactgctttggggtggaagacacactgaaagccatggaaatgggtgctgttgagatactg
attgtttatgagaacctggataccatgagatacatcctacgttgccacggagcagaggga
cttgctatggcggagaagggtaccgatgagaagacgttgtatttgacgccagagcaggag
aaagacaagtctcacttcacagacaaagagactggtcaggaccatgagctgatcgagagc
ttgccattacttgaatggttcgccaacagctataagaagtttggagcctgtctggagatt
gtcactgacaagagccaagaaggatcccagtttgtcaaaggctttggtggaattggtggg
atcttgcggtacagggtggatttccaggccatagagtaccaaggagaagacgatgagtta
tttgatttggatgactactag
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