Salmo salar (Atlantic salmon): 106568141
Help
Entry
106568141 CDS
T04363
Name
(RefSeq) very low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106568141
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
106568141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
SGL
Motif
Other DBs
NCBI-GeneID:
106568141
NCBI-ProteinID:
XP_013993684
UniProt:
A0A1S3LT03
LinkDB
All DBs
Position
ssa13:complement(90447533..90488843)
Genome browser
AA seq
873 aa
AA seq
DB search
MLTSLLEILILPICLQQCGFVHGSKTECEPSQFQCGNGRCIPSVWQCDGDEDCSDGSDEN
TCVRKTCAEVDFVCRNGQCVPKRWHCDGEPDCEDGSDEHVEVCHTRTCRVNEFSCGAGST
QCIPVFWKCDGEKDCDNGEDEMSCGNITCASLEFTCASGRCISRNFVCNGEDDCGDGSDE
QECAPSSCGPSEFQCGNATCIPGNWVCDDDVDCQDQSDESPQRCGRQPTPPAKCSSSETQ
CGSGECIHRKWRCDGDPDCKDGSDEANCSVRTCRPDQFKCEDGNCIHGSRQCNGLRDCAD
GTDEVNCKNLTQCNGPDKFKCRSGECIEMNKVCNKARDCPDWSDEPIKECNLNECLLNNG
GCSHICRDMVIGFECDCTPGLQLIDRKTCGDINECMNPGICSQICINLKGGYKCECHNSY
QMDPTTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVALDADFTQQRIFW
ADLSQRAIFSTVLDKRGDVGSHVKVIDNVTPVGIAVDWIYNNIYWSDLGTKTIEVANFNG
TKRKVLFSSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVQTDIQWPNG
ITLDLIKSRLYWVDSKLHMLCSVDLNGNNRRKVLQSPDYLAHPFALTVFEDRVFWTDGEN
EAIYGANKFTGSDVITLASNLNEPQDIIVYHELIQLSGTNWCNEKGLNGGCAYMCLPAPQ
INKYSPKYTCACPRDQTLASDALHCRPAPSKDDGKALIHPTHPQATTVPNVVPKPVPAEA
NSSTSIHEVNSTARGSTAAWAILPVLLLAIAAAGGYLMWRNWQLKNKKSMNFDNPVYLKT
TEEDLNIDISRHTSNIGHTYPAISVVNTEDDLS
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgtctcttctggagattcttattctaccgatatgtcttcaacagtgcggtttt
gtacacggatcaaagacagaatgtgagcccagtcagttccagtgtgggaacggtcgctgc
atcccgtctgtctggcagtgtgacggggatgaggactgctccgacgggagtgacgagaac
acctgcgttcggaagacctgtgcggaggtggactttgtctgtcgtaatggccaatgcgtc
cccaagagatggcactgcgacggagagccagactgtgaggatgggtctgatgagcatgtg
gaagtgtgccacaccaggacctgccgtgtgaatgagtttagctgtggggccggttccacc
caatgcatccccgtcttctggaagtgtgatggagagaaggactgcgataacggagaggat
gaaatgagctgtggtaacatcacgtgcgcctcgctggagttcacctgtgcgagcggccgc
tgcatctcccgtaacttcgtctgtaacggggaggatgactgtggtgacgggagtgatgag
caggaatgtgctccatcctcctgtggtcccagcgagttccagtgtggcaatgccacctgt
atccctggcaactgggtctgtgacgatgacgtggactgccaggaccaatctgatgagtcg
cctcagcgatgtggtcgccaacccacgccgccggccaaatgttcgtccagcgagacacag
tgtgggtctggggagtgcatccaccgcaagtggcgatgtgacggggacccagactgcaag
gatggcagcgacgaagccaactgttctgttcgtacctgcagaccggaccagttcaagtgt
gaggacggcaactgtatccacggcagcagacagtgcaacggtttgcgtgattgtgcagat
ggcaccgatgaagtcaactgcaaaaacttgacacagtgcaatggccctgacaaattcaag
tgtcggagtggagagtgtatagagatgaataaagtgtgcaacaaggcccgggactgtcca
gactggagcgacgagcccatcaaagagtgcaacctgaacgagtgtctgctgaacaacgga
gggtgctcccacatctgcagggacatggtgattggcttcgagtgtgactgcacccctgga
ctgcagctcatagaccgcaagacctgtggagacatcaatgaatgtatgaaccctgggatc
tgtagtcagatttgtatcaacctgaagggaggttataagtgtgagtgccacaacagctac
cagatggaccccaccacaggagtgtgcaaggctgtgggcaaggagccctgtcttatcttc
actaaccgtcgggacatccggaagctgggtctggagcggcgggagtacacccagatcgtg
gagcagctgcggaacacggtggcactggatgcagacttcacccagcagaggatcttctgg
gcagacctgagccagagggccatctttagcacagtgttggataagagaggagatgtagga
agtcatgtgaaggtgattgataatgtgacacctgtggggatcgctgtggactggatctat
aacaacatctactggtcagacctcggcaccaagaccattgaagtggccaacttcaatggc
accaagcggaaagttctcttcagcagtggtttgaaagagcctgcatccatcgctgtggat
ccactctctggattcctctattggtcagactggggtgaaccagccaagattgagaagtct
ggtatgaacggggttgacaggcaggtcctggtccagactgatattcagtggcccaatgga
atcactctagacctgatcaagagcagactgtactgggtggactccaagctgcacatgctc
tgtagcgtggacctgaacggcaacaaccgtaggaaagtgctgcagtccccagactacctg
gctcacccctttgcgctcactgtgttcgaggatcgagtgttctggacagatggggagaac
gaggcgatctacggagcaaacaagttcacaggctctgatgtgattaccctggcaagcaat
ctgaacgagccgcaggacatcattgtttaccatgagctaatccagctgtccggaacaaac
tggtgcaatgagaagggtctgaacggaggctgtgcctacatgtgcctgccagcgccacag
atcaacaaatactcccccaagtacacatgtgcgtgtccgcgagaccagacgctcgcctca
gacgcccttcactgcagaccagctccctcaaaggatgatgggaaagctctaatacatccc
actcacccccaagcgaccacagtgccaaatgttgtccccaaacctgtccctgctgaagcc
aacagcagtacatccatccatgaggtgaactccacagctagaggatctacagctgcctgg
gcaatcctccctgtgttgttgctggccattgctgcagcaggaggctacttgatgtggcgt
aactggcagctgaagaataaaaagagcatgaacttcgacaatccagtgtacctgaaaacc
acagaagaggacctcaacattgatatcagcaggcacacctccaatataggccacacatac
ccagcaatatcagtggtgaataccgaagatgacttgtcataa
DBGET
integrated database retrieval system
