Salmo salar (Atlantic salmon): 106568173
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Entry
106568173 CDS
T04363
Name
(RefSeq) nipped-B-like protein B
KO
K06672
cohesin loading factor subunit SCC2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106568173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106568173
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
106568173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
106568173
NCBI-ProteinID:
XP_013993743
UniProt:
A0A1S3LRY7
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All DBs
Position
ssa13:complement(88703796..88782749)
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AA seq
2681 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPVLLQTVLSRNPNIFREKNIMQQPMMPQ
YKMSQNSMHGSPASTNYQQTTISHSPSSRFAPPQMGSDARFTPQQNSPVPSPYAPQSPAA
YMQQYPHPPSYSQHQQIQQGSPQRPVQPCLEVQTQPQASPHQNPSTPTLVASPMVPGGMR
NIHDNKVSGQISSNSANHNARHGSNEDYMNIVHRLGNEESDPSMRNASFPLRSPQSVCSP
AGSEGTPKAGLRPSLILHSPHPYASPRDSAPDLLLDSPDCKKKQKKLTKEEKEQLDKAAM
YDIVSSPSKDSTKLTLKLSRVKSTEMDQSGELLPGAEDQDTDLAYNSLQFSRTQQDPAHR
LGPGQGEQSGYQQVPVLQNTKQAGGVISGAVYDDAEMDALAEIERIERETLIERERCSKE
VQDKDKPLKKRKQDSYPQEPGAGGTAGATQPGVGGGNAGSKLAPQEASAASNGASRPALM
VSIDLQQAGRADGQPEVNIGTHTPALRSWPEERLCPGDGPDSTGVLRLNSKTEGDTLQTA
DVRPEVIKQRADTPKKLGPDVRPETPKHKHENRRDSSKHRHDGKPDISKARPDARMPDKP
RQRHEGRSDSGHREDRSRDSDPSRIRRPETPSKSSRGEHDSKHGRDRDRERGDKDRERKH
RTEAGDPRDRRSPEQRSRPESPRVKQEGRGGVDHSGRQRTDRPGPNLKSPNKEERRSGEE
RRSGDGSRNRQDSKQQPVENKQEFPAYLLGGVKSGGFKNFVIPKVKRDKDGHVLAAEMRK
PGLGSVVEGWKEPRVKLERLGLVEKMKTAAKPVVVLQKLSIDEVQKIIRERKDRSARSSK
SSKSRTSHWISEKESTMPLCERVKMNKRKRSTIKEKPKYAEVNSDDDDDDDDSVTESTRK
RHKKEREKTWEPDERERRGSGRRGSGSRHRERSPEDSDDESPPPSMSDLVRKMKKKEKQK
KRKAYEPKLTAEELMDSSTFKRFSASVDNILESLEDIDFNAMDDDEIPQELLLGKHQLSE
LASESAKIKAMGITFRLSSGKLVKVLNILEKNIQDGSKLSTLMNHDADAEDEERLWRDLI
MERVTKSADACLTALNIMTSARMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDP
HGGGLLSSRAKRAKSSTHKQRVIIMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGIT
PFFVESVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDK
DGEPMYIQMVTALVLQLIQCVVHLPNNRDSHDEYDKKVDQDVLITNSYETAMRAAQNFLS
VFLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEM
ALRVASLDYLGTVAARLRKDGVTSKMDQRSIDRILRETQGNDETQQLQKALLDYMDENAE
TDPSLVFARKFYIAQWFRDTLTEMEKAMKSQNQRGDEDSSEGQHHAKDIETTGEIMQRAE
ARKKYLRNIIKTAPSQFSTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVL
GESAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLS
RPQLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVKMIRRVNDEEG
IKKLVNETFQKLWFTPTPNHDKDAMTRKILNITDVVSACKDTGYDWFEQLLQNLLKTEED
AAYKPARKACVQLVDNLVEHILKYEESLTDIENKGVNSNRLVSCITTLFLFSKIRSQLMV
KHAMTIQPYLTTKCNTQSDFMVICNVAKILELVIPLMEHPSETFLTTIEEDLMKLIIKYG
MTVVQHCVSCLGAVVNRVTRNYKFVWACFNRYYGALTKLKTQHSEDSNNPVLAANKPALL
RSLFTVGALCRHFDFDEEEFKGPTKVVIKEKVMELLLYFTKHEDEEVQTKAIIGLGFQFI
QYPGLMFMQDVMSLYNGILSDRKSSVNLKIQVLKNLQTYLQEEDSRMQEADQQWKKLSKQ
EDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSTVRHFALNVIALTLNQGLIHPVQCVP
YLIAMGTDPEPTMRNKADQQLVEIDKKYSGFIHMKAVAGMKMSYQVQQAIWSAKGTVIRG
YRQDETTSALCAHLFSMVRSNRQHRRAFLISLLNLFDDSSKMEVNMLLYMADNLACFPYQ
IQEEPLFIMHHIDITLSVSGSNLLQSFKESLLKEPRQREKKLKERKYQSEEENSSSSSSS
EEEHHRHSISSNSSDEDDEVVRRLKKPKHRAQAPVESDSDSDLEMEDLDKVMQRLPDNPI
PLLDFANASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYEKAVNRKGHVHFSPH
QTLDFLTSDLANVELTYDIKRRIVKQYLDFKLLMEHLDPDEEDEEGEASASANARNKAIT
SLLGGHSHQDHKNHHQDHKNHHQAPIETDDDESDGDEKTPVSSRRSRKHGDSAEASGHMN
EMLAARDVIALCCPKYKDRPQIARIIQKTNTGYRVQWMAGSYSGVWGEAKKRDGRKTVPW
VDTIKESDIIYKKIALTSAHKLTNRVVQTLRSLYSAKEGTS
NT seq
8046 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgctgggatcgctagccttact
gacttgttaaaccagctgcccctgccatcccctctccccgccaccaccactaagagtctg
ctgttcaatgggaggatcgcggaggaggtcaactgtctgctggcctgccgggatgagaac
ctggtgtcccagctggctcacagcctcaaccaggtatccacagagcacatagagctgaag
gacaacctgggcagtgatgacccggagggagacgtgcctgtgctgctgcagacagtgctg
tctaggaaccccaacatcttcagggagaaaaatataatgcagcagccaatgatgccgcag
tacaagatgtcccagaactccatgcatgggagtccggcatcgacaaactaccagcaaacc
actatctcacacagcccttctagtcgctttgcccctccacagatggggtcggatgccagg
ttcacgccccagcagaacagccctgtgcccagcccctatgccccccaaagccctgctgct
tacatgcagcagtaccctcacccacctagctactctcagcaccaacagatccagcaagga
agcccccagaggcctgtgcagccctgcctagaggtgcagacccagccgcaggcctccccc
caccagaacccctccaccccaaccttagttgccagccccatggttcctggtggcatgcgg
aacatccacgacaacaaggtctccgggcaaatttcaagcaactcagccaatcacaatgcc
agacatggctccaacgaagactacatgaacatagtccacagactagggaatgaggagagt
gatccttccatgagaaatgcctccttcccactccgctcgccccagtctgtttgttcccct
gctggcagcgaagggacaccaaaagcagggttacgacctagcctcatccttcactcccca
cacccttacgcttccccccgtgacagcgctcccgacctcctcctggactctcctgactgc
aagaagaagcagaagaagctaactaaagaggagaaggagcagttggataaagctgctatg
tacgatatcgtcagctctccctctaaagactctaccaagctgaccctcaaactgtcccgg
gtgaagtccactgagatggaccagtccggagagctcctacctggggcagaggaccaggac
actgacctggcctacaacagcctgcagttctcccggacgcagcaggaccctgcccacagg
ttagggccaggccagggggagcagtcaggctaccagcaggtccctgtgctccagaacact
aagcaggctggaggggtgatcagcggagctgtttacgacgatgctgagatggacgcgctc
gctgagatcgagaggatagaacgggagacgctcatagaaagggagcgctgctccaaagag
gttcaggataaagacaagccactgaagaagcggaagcaggactcgtatccccaagagcct
ggagctggaggtacagcgggggcaactcaacctggcgtgggagggggcaatgctggcagc
aagctggcaccccaggaggctagtgctgccagtaatggtgcgagccggcctgccctaatg
gtcagcatcgacctgcagcaagcaggtagagctgacgggcagccagaggtaaacataggc
acccacacccctgccctgaggagctggcctgaggaacgcctgtgtcctggggacggcccc
gactccactggagtcctgcggctaaactccaagacagaaggagacacactacagactgca
gacgtccggccagaggtcatcaagcagcgtgccgacacccccaagaagctgggccccgac
gtccgcccagagacccccaaacacaagcacgaaaacagacgagactcgtccaaacatcga
cacgatggcaaacctgacatcagcaaggcccgccctgacgccaggatgcctgacaagcca
cgacaacggcacgagggtcgctcagactctggtcacagggaggacaggtcccgggacagt
gacccatcccgcatccgcaggccagagacccccagcaaatccagcaggggggaacatgac
tccaaacatggacgggacagagacagggagcggggggataaagacagggagaggaaacac
aggacagaggcaggggatccacgggaccgaagatctccagagcagcgctccaggccagag
agcccgcgggttaagcaggaaggccgagggggggtggaccacagtgggcgccagagaact
gaccggccaggccccaacctcaaatcccccaataaagaggagaggaggagcggggaggag
aggaggagtggggacggcagcaggaaccgacaggactctaagcagcaacctgttgaaaac
aagcaggagttccctgcttacctgctggggggcgtaaagtctggaggctttaagaacttt
gtgattcccaaagtgaagcgggataaggatgggcatgtgttggcagctgagatgaggaag
cctggtctgggttctgtagtggagggctggaaggagccccgggtcaagctggagcgactg
gggctggtagagaagatgaagacagcagccaaaccggttgtggtgctgcagaaactcagc
atcgacgaggtgcagaaaatcatcagggagaggaaagatagaagcgcacgcagctccaag
tcctccaagagcagaacctctcattggatctctgagaaagagtccaccatgccactgtgt
gagagggtgaagatgaacaaacgcaagcgcagcactatcaaggagaagcccaagtacgcc
gaggtcaactcagatgatgacgatgacgacgacgactctgtgacggagtctacgcggaag
cgtcacaagaaggagcgggaaaagacatgggagcctgatgagcgagagaggagaggctca
gggcgcagggggtccggcagccgccaccgtgaacgcagcccagaggattcagacgatgaa
tccccaccgcccagcatgagtgaccttgtcagaaagatgaagaagaaggagaaacagaag
aaaagaaaggcatacgagcccaagctgacagcagaagaactgatggactcctccacgttc
aagaggttctcagccagtgtggacaacattctggagagcttggaggacattgacttcaat
gccatggatgacgatgagatcccacaggagcttctgctggggaaacaccagctgagtgaa
ctggccagcgaatctgctaagatcaaggccatgggcatcaccttcaggctttcatctggt
aagttggtgaaggtcctgaacatcctggagaaaaacattcaggacgggtccaaactctcc
acactgatgaaccatgacgcagacgcagaagacgaggagcgactgtggcgtgacctcatc
atggagcgcgtgacaaagtcagctgacgcctgtctgactgccctcaacatcatgacgtcg
gcccgcatgcccaaggcggtgtacatcgaggatgtgattgagagggtgctgcagtacacc
aagtttcacctgcaaaacaccctctaccctcagtatgaccctgtctacagagtggaccct
cacggaggtggcttgctgagctccagggctaagagagccaaaagctccacacacaagcaa
agggtgatcatcatgctctacaacaaggtgtgtgacatcgtcagcaacatctctgagctc
ctggagatacagctgttgactgacaccaccatcctgcaggtctcctccatgggcatcact
ccattctttgtggagagtgtcagtgagctacagctgtgtgccatcaaactagtgactgcg
gtgttctctcgctatgaaaaacacaggcagctcatcctggaagagatcttcacctctctg
gccagactacccaccagcaaacgcagcctcaggaactttaggctgaacagcagtgataag
gatggggagcccatgtacatccagatggtaacagctctggtgcttcagcttatccaatgt
gtggtgcacctcccgaacaacagggacagccacgacgagtatgataagaaggtggaccaa
gatgtcctgatcacgaactcttatgagacggcaatgcgagcagctcagaacttcctgtcc
gtcttcctaaagaagtgtggcagtaagcagggagaggaggactatcgcccactgtttgaa
aactttgtccaggacctgctgtctacggtgaacaaaccagagtggccagctgctgagctt
ctcctcagtctgctgggtcgtctgctggtgcatcagtttagcaataagcagacagagatg
gctctgagggtggcatcgctagactacctgggcaccgtcgctgcccgcctgcgcaaagac
ggcgtcaccagcaagatggaccagcgctccatcgaccgcatcctcagagagactcaaggc
aatgatgagacacagcagctgcagaaggccctgttggactacatggatgagaacgcagag
acggatccatctctagtttttgccaggaagttctacattgcccagtggttcagggacact
ttgacagagatggagaaggccatgaagtctcagaaccagcgaggggatgaggactcttct
gaaggccagcaccacgccaaggacatcgagaccaccggagagatcatgcagagagccgag
gcacgcaagaagtacctccgcaacattatcaagactgcgccctcgcagttcagcacactg
aggatgaactctgacactgtggactatgatgactcctgcctgattgtcagatatttggcc
tctatgaggccattcgctcagagcttcgatatttatttaacacagatcctgagagtgctg
ggggagagtgccatagctgtcagaactaaagccatgaagtgtttgtctgaggtggtggct
gtagaccccagtattctggccaggttggacatgcagcgtggggtccatggtcgtctgatg
gacaactccaccagtgtacgcgaggctgctgtggagctgctggggcgttttgtgctgagc
agaccccagctcacagagcagtactacgacatgctgatcgagaggatactggacacgggt
ataagtgtgaggaagagggtgattaagatccttagagacatctgtctggagcaacccacc
ttcaacaagatcactgagatgtgtgtcaagatgatccgcagggtcaacgacgaggagggc
atcaagaaacttgtgaacgagaccttccagaaactctggttcacccctacacccaatcac
gataaagacgccatgacccgcaagatcctcaacatcacagacgtggtgtctgcatgcaaa
gatacaggctatgactggtttgagcagctgcttcaaaacctgctgaagaccgaggaagat
gccgcctataagccagccagaaaggcctgcgttcagctggtggacaatctagtggaacac
atcctaaaatatgaagagtctctcactgacattgagaacaagggggtgaattccaaccgt
ctggtgtcctgcatcaccaccctctttctgttcagtaaaatccgatcccagctgatggtc
aaacatgccatgaccatccagccttatctcaccaccaagtgcaacacccagagcgacttc
atggtgatctgtaacgtggccaagatccttgagctggtgatccctctgatggagcacccc
tctgagaccttcctcaccaccatagaggaagacctgatgaagctcatcatcaaatacggc
atgacggttgtacaacactgtgtgagctgtcttggagctgtggtgaacagggtgactcgc
aactacaagtttgtttgggcttgtttcaaccgttactatggtgccctgaccaagctgaag
acccagcactctgaggactccaacaaccctgttctggctgctaacaaaccggccttgctg
cgctcgctgttcactgtgggggcactctgtcgccactttgactttgacgaggaggaattc
aagggccccacaaaggttgtgataaaggagaaagtgatggagcttttgctgtacttcact
aagcatgaagatgaggaagttcagaccaaggccatcattggtctaggcttccagttcatc
cagtacccagggctgatgttcatgcaggatgtgatgagtctgtacaacggcatcctgtcg
gacaggaagagctctgtcaacctaaagatccaggtgctgaagaacctgcagacatacctg
caggaggaagactcgcgcatgcaggaggccgatcaacagtggaagaagctgtcgaagcag
gaggacctgaaggagatgggtgacatctcgtcaggtatgagcagctccatcatgcagctg
tacctgaagcaggtgctggaggccttcttccacacacagtccaccgtacgacattttgcc
ctcaacgtcattgccctgacactcaaccagggcctcatccatcctgtacagtgtgtgccc
tacctgattgccatgggaacggacccagagcccaccatgaggaataaggcagaccagcag
ctggtggagattgataagaaatacagcggcttcatccatatgaaggctgtggcggggatg
aagatgtcctaccaggtgcagcaggctatctggtcagctaagggtacggtgatccggggt
taccggcaggacgagaccacctcagccctctgcgcccacctcttctccatggtccgatcc
aaccggcagcaccgacgagccttcctcatctctctgctcaacttgtttgatgacagctcg
aagatggaggtcaacatgctcctgtacatggcagacaacctagcctgtttcccctaccag
atccaggaggagcctcttttcatcatgcaccacattgacatcaccctgtctgtgtcaggc
agcaacctgctgcagtccttcaaggagtcccttctcaaagagccaaggcagcgggagaag
aagctgaaagagaggaagtaccagtcagaggaggagaactcgtcatcgtcgtcgtcatcg
gaggaggaacatcaccgtcacagcatcagctccaacagtagtgacgaggacgacgaggtg
gtccgcaggctcaagaagcccaaacaccgggcccaggcccctgtggagtcagactctgac
tctgacctggaaatggaggacttggacaaggtgatgcagcgtctgcctgacaaccccatc
cccctgttggactttgccaacgcctcacagggaatactactactactggttcttaagcag
catctcaagaacctctacggcttctcggacagtaaaatccaaaagtactctccgacggaa
tcggccaaggtatacgagaaggcggtgaacaggaagggtcacgtgcacttcagccctcac
cagacactggacttcctgacctctgacctggccaacgtagaactcacctacgacatcaag
aggaggatcgtcaaacagtacctagatttcaagttactgatggagcatttggaccctgat
gaagaggatgaggaaggtgaggcgtcagccagtgctaatgccagaaacaaagccatcact
tcattgctgggagggcacagccaccaggaccacaagaaccaccaccaggaccacaagaac
caccaccaggctcctatagagacggacgacgacgagagcgacggagatgagaaaacccca
gtgtcatcacggcggtcgaggaagcacggcgactctgcagaggcatcaggtcacatgaat
gagatgttggccgccagggacgtcatcgccctctgctgccccaagtacaaggaccggccg
cagatcgcccgcatcatccagaagaccaacacgggctacagagtgcaatggatggctggc
tcgtactctggagtctggggcgaggctaagaaacgggacggacgcaaaacggtgccttgg
gtggacactatcaaggagtctgacattatttacaagaaaatcgccttgacgagtgcacac
aagctgacgaacagagtggtgcagactttacggtcactgtactcagcgaaggagggaact
tcctaa
DBGET
integrated database retrieval system
