Salmo salar (Atlantic salmon): 106568185
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Entry
106568185 CDS
T04363
Name
(RefSeq) PDZ and LIM domain protein 5-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106568185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
106568185
Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
106568185
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
106568185
NCBI-ProteinID:
XP_013993775
UniProt:
A0A1S3LSH1
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Position
ssa13:87865925..87968299
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AA seq
626 aa
AA seq
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MNSNYSISLGGPAPWGFRLQGGKDFCLPLTISRLTDGGKAAKAKMSVGDVVLSIDGIATN
GMNHLEAQNKIKACTDNLNLTLQKASSVPKADAPKDEPLEIIKPVPITHPAPPSTFTSPS
PQPGAAYNKTARPFGGGSSAGAVTSSLTAPKVASIPSASSAFTPAAPSSQQPQPPFPLAS
RSRSPAPPSSAPPPRPGSGRSPFTTPSSTPSSSSSSSPARMTAPSSNPGAPQSSCYNTPI
NLYSNANACEVAIGQRRGLLEAQGVVVDQIKEQFNGNKVEPELIHASPLSEASKKRLIED
TEDWHPRTGTSQSRSFRILAQITGTEKDQAQENSAGRNKVVENAPPSGHITTSVKTMTKV
PGAPRNGNSVPPPTFKIPSAQVKPSWPAGGSAGLSKGGAAPSFGRVSNTAPVPTVPKVSD
RPAPQAHPKDQNSLVQRAEHIAAGTRTPMCGHCDKVIRGPFLVAMGMSWHPEEFNCSHCH
MSLVESGFVEERGTVYCAHCYEKFFAPTCTSCQQKVLGEVINALKQTWHVYCFLCASCQQ
PIRNNTFHLEDGLPYCERDYYQLFGTSCHGCDFPIEAGDKFLEALGFTWHDTCFVCAVCN
TSLEGQAFFSKKDKALCKKHANTVTI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaactacagcatctccctgggtggccccgccccctggggcttcagactgcag
ggaggaaaggacttctgtctgcccctcactatctcacggctgaccgatgggggcaaggca
gccaaagccaaaatgagtgtgggagatgtagttctgtctatcgacggaatcgccaccaac
ggcatgaaccacctggaggcccagaacaagatcaaagcctgcactgacaacctcaacctc
accctgcagaaagcttccagtgttcccaaggctgatgcaccaaaggacgagccactggag
atcattaagcccgtgccaatcacccatccagctccgccctccaccttcaccagcccctcc
ccccaacccggtgctgcctacaacaagacggcccgcccctttggcgggggcagcagtgcg
ggtgcagtcacttcctccctgaccgccccaaaggtggcctccatcccgtctgcatcgtct
gctttcacccccgccgccccctcctcccagcagccccagcctcccttcccactagctagc
cgctcccgctccccagccccacctagctcagccccaccccccagacccggctctggccgt
tcccccttcaccaccccctcctccactccctcctcttcttcctcatcctccccggccaga
atgacagccccctcctccaatcccggtgctccgcagtcctcttgctataacacgccaatt
aacctgtactccaatgccaacgcctgtgaggtggccataggacagaggcggggcctgttg
gaagcccagggtgtggtggtcgaccagatcaaagaacagtttaatgggaacaaagttgaa
ccagagttgatccacgcctcgcccctcagcgaggccagtaagaagcgtctgatcgaggac
acagaggactggcatcctcgcaccggaacctcccagtccaggtccttcagaatcctggct
cagatcaccggcacagagaaagaccaagcccaggagaacagcgctggaaggaataaagtt
gttgagaatgccccgcccagtggccacatcacaacatcagtgaagaccatgaccaaagtc
ccaggagcccccaggaatggcaacagtgtccccccacccaccttcaagatcccctctgcc
caggtcaaaccctcctggccagctggaggttcagcaggtttatctaagggtggcgctgcg
ccctcttttgggcgggtcagcaacactgcaccagtacccacagtacccaaagtttctgac
cgccccgccccccaggcgcaccccaaggaccagaactccctggtacagcgggccgaacac
atcgcagcgggaacacgcacccccatgtgtggccactgtgacaaggtcattagaggtcct
ttcctggtggccatgggcatgtcctggcaccctgaggagtttaactgttcccactgccac
atgtctctggtggagtctggctttgtggaggagaggggaacagtgtactgtgctcactgc
tatgagaagttcttcgcccctacctgcaccagctgccagcagaaggtcctgggggaagtc
atcaatgccctgaagcagacatggcatgtgtactgcttcctgtgtgcgtcctgccagcag
ccaatcagaaacaacaccttccacctggaggatgggctgccatactgtgaaagagactac
tatcaactctttggtaccagttgccatggttgcgactttcccatcgaggcaggagacaag
tttctggaggcgttgggattcacctggcatgatacctgcttcgtgtgtgcagtctgcaac
accagtttggagggccaagccttcttctctaaaaaggacaaggctctgtgcaagaaacat
gccaatacagtcacgatctga
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