Salmo salar (Atlantic salmon): 106568192
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Entry
106568192 CDS
T04363
Name
(RefSeq) serine/arginine-rich splicing factor 9-like
KO
K21123
serine/arginine-rich splicing factor 9
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106568192
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106568192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106568192
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
SR proteins
106568192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
DUF2457
Motif
Other DBs
NCBI-GeneID:
106568192
NCBI-ProteinID:
XP_013993792
UniProt:
A0A1S3LS69
LinkDB
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Position
ssa13:87518136..87522587
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AA seq
248 aa
AA seq
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MTDGRIYVGNLPMDVQEKDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFDDPRDAEDAVY
GRNGYGFGDSKLRVEYPRSSGAKFSGPMGGGEGGGPRGRFGPPTRRSEFRVIVTGLPQTG
SWQDLKDHMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDRTEFRSHQGETANIRV
HGERGASYGRSRSRSRSPRGRGYSPPYQSRGSPPQRYQSPPRRLVSRHSPPARRHPVPYH
SPPPRHYR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggaaggatctacgtgggaaatcttccaatggacgtccaggagaaggacata
gaggatctcttcttcaaatatggaaaaatccgggatatcgaactaaagaataacagggga
accatcccttttgcttttgttcgcttcgatgatccacgggatgcggaagacgcggtctat
ggaaggaatggatatggattcggagactccaagctgcgtgtagaataccctcgctcctct
ggcgccaaatttagtggccctatgggaggaggagaaggagggggtcctagggggaggttt
gggcccccaactcggagatctgagttccgggtgatagtgactggcttgccccaaaccggg
agctggcaggatctgaaagaccatatgcgtgaggcaggggatgtgtgtttcgccgacgtg
cagcgagatggtgaaggagtggtggagtttgtccgtcgggaggacatggaatacgccctg
cgcagactggacaggactgagttccgttcccatcagggggagacggcgaacattcgtgtc
cacggagagcgtggtgccagttacggtcgctcgcggtctcgctccagatccccccgaggg
cgtggctactcaccaccttaccaaagcagagggtcccctccacagcgctatcagtcaccc
ccacgccgccttgtgtcccgccatagccccccagcgaggcgacacccagtaccgtaccat
agcccgcccccacgccactatcgatag
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